Search of human proteins with 122937277

Search of human proteins with 122937277

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|122937277 heat shock transcription factor family member 5
[Homo sapiens]
         (596 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|122937277 heat shock transcription factor family member 5 [Ho...  1232   0.0  
gi|239752444 PREDICTED: similar to heat shock transcription fact...    82   2e-15
gi|239746964 PREDICTED: similar to heat shock transcription fact...    82   2e-15
gi|50312655 heat shock transcription factor, Y-linked 1 isoform ...    80   7e-15
gi|32526913 heat shock transcription factor, Y linked 2 isoform ...    80   7e-15
gi|169216697 PREDICTED: heat shock transcription factor family, ...    78   2e-14
gi|7706603 heat shock transcription factor family, X linked 1 [H...    78   2e-14
gi|24211017 heat shock transcription factor, Y-linked 1 isoform ...    68   3e-11
gi|50312659 heat shock transcription factor, Y linked 2 isoform ...    68   3e-11
gi|207113147 heat shock transcription factor 2 isoform b [Homo s...    67   5e-11
gi|4758568 heat shock transcription factor 2 isoform a [Homo sap...    67   5e-11
gi|5031767 heat shock transcription factor 1 [Homo sapiens]            60   4e-09
gi|100913209 heat shock transcription factor 4 isoform b [Homo s...    60   4e-09
gi|100913211 heat shock transcription factor 4 isoform a [Homo s...    60   4e-09
gi|21070967 neurexin 1 isoform beta precursor [Homo sapiens]           38   0.023
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    37   0.039
gi|71274152 hypothetical protein LOC388939 [Homo sapiens]              37   0.052
gi|5453936 POU class 3 homeobox 3 [Homo sapiens]                       37   0.052
gi|91982772 mucin 17 [Homo sapiens]                                    37   0.067
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur...    36   0.088
gi|150378539 piccolo isoform 1 [Homo sapiens]                          36   0.088
gi|238859557 regulatory factor X1 [Homo sapiens]                       36   0.11 
gi|58530876 melanoma antigen family C, 1 [Homo sapiens]                35   0.15 
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         35   0.15 
gi|83367077 mucin 16 [Homo sapiens]                                    35   0.20 
gi|19718780 semaphorin 6B precursor [Homo sapiens]                     35   0.20 
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    35   0.26 
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]            34   0.44 
gi|151301154 mucin 6, gastric [Homo sapiens]                           34   0.44 
gi|26667227 eyes absent 2 isoform a [Homo sapiens]                     33   0.57 

>gi|122937277 heat shock transcription factor family member 5 [Homo
           sapiens]
          Length = 596

 Score = 1232 bits (3187), Expect = 0.0
 Identities = 596/596 (100%), Positives = 596/596 (100%)

Query: 1   MEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGG 60
           MEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGG
Sbjct: 1   MEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGG 60

Query: 61  GTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQ 120
           GTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQ
Sbjct: 61  GTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQ 120

Query: 121 PQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASAATAPLQHQQPPPPAGPRP 180
           PQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASAATAPLQHQQPPPPAGPRP
Sbjct: 121 PQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASAATAPLQHQQPPPPAGPRP 180

Query: 181 EPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPG 240
           EPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPG
Sbjct: 181 EPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPG 240

Query: 241 QVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQ 300
           QVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQ
Sbjct: 241 QVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQ 300

Query: 301 YSQAYYPTAVLQCCSPTHMDALSSCVTPNASSYAHCNYFQNPSMQSSYPVEFLPSNWPCS 360
           YSQAYYPTAVLQCCSPTHMDALSSCVTPNASSYAHCNYFQNPSMQSSYPVEFLPSNWPCS
Sbjct: 301 YSQAYYPTAVLQCCSPTHMDALSSCVTPNASSYAHCNYFQNPSMQSSYPVEFLPSNWPCS 360

Query: 361 TTDENTKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNP 420
           TTDENTKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNP
Sbjct: 361 TTDENTKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNP 420

Query: 421 CSASQASQLEPLTPVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAA 480
           CSASQASQLEPLTPVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAA
Sbjct: 421 CSASQASQLEPLTPVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAA 480

Query: 481 IQQAHVKLKEHLNHNPSPSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLIS 540
           IQQAHVKLKEHLNHNPSPSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLIS
Sbjct: 481 IQQAHVKLKEHLNHNPSPSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLIS 540

Query: 541 EMGPASKPSEDTGLATPARYREHRSNSQQGKSPDLHLLVDVACKQERFPKEEELKE 596
           EMGPASKPSEDTGLATPARYREHRSNSQQGKSPDLHLLVDVACKQERFPKEEELKE
Sbjct: 541 EMGPASKPSEDTGLATPARYREHRSNSQQGKSPDLHLLVDVACKQERFPKEEELKE 596


>gi|239752444 PREDICTED: similar to heat shock transcription factor
           family, X linked 1 [Homo sapiens]
          Length = 354

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 22/171 (12%)

Query: 13  NFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPELF 72
           +FP KLW +V    ++S+ W+  G+ ++ID+ LF+ E+L   G               +F
Sbjct: 82  SFPRKLWTIVEEDTFKSVSWNDDGDAVIIDKDLFQREVLQRKG------------AERIF 129

Query: 73  KTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQPQLLVHLKRLTS 132
           KT S TSFIRQLNLYGF K            GN  +  + N +F+RD+P+LL +++R  +
Sbjct: 130 KTDSLTSFIRQLNLYGFCKT-----RPSNSPGNKKMMIYCNSNFQRDKPRLLENIQRKDA 184

Query: 133 -ANKAKLAAGLEVPCR----PPNRFQRLLITSASAATAPLQHQQPPPPAGP 178
             N A+ A  +  P R       R  R+   +A      +  Q  P   GP
Sbjct: 185 LRNTAQQATRVPTPKRKNLVATRRSLRIYHINARKEAIKMCQQGAPSVQGP 235


>gi|239746964 PREDICTED: similar to heat shock transcription factor
           family, X linked 1 [Homo sapiens]
          Length = 333

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 22/171 (12%)

Query: 13  NFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPELF 72
           +FP KLW +V    ++S+ W+  G+ ++ID+ LF+ E+L   G               +F
Sbjct: 82  SFPRKLWTIVEEDTFKSVSWNDDGDAVIIDKDLFQREVLQRKG------------AERIF 129

Query: 73  KTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQPQLLVHLKRLTS 132
           KT S TSFIRQLNLYGF K            GN  +  + N +F+RD+P+LL +++R  +
Sbjct: 130 KTDSLTSFIRQLNLYGFCKT-----RPSNSPGNKKMMIYCNSNFQRDKPRLLENIQRKDA 184

Query: 133 -ANKAKLAAGLEVPCR----PPNRFQRLLITSASAATAPLQHQQPPPPAGP 178
             N A+ A  +  P R       R  R+   +A      +  Q  P   GP
Sbjct: 185 LRNTAQQATRVPTPKRKNLVATRRSLRIYHINARKEAIKMCQQGAPSVQGP 235


>gi|50312655 heat shock transcription factor, Y-linked 1 isoform 1
           [Homo sapiens]
          Length = 401

 Score = 79.7 bits (195), Expect = 7e-15
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 22/134 (16%)

Query: 13  NFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPELF 72
           NFP KLW++V S +++SI WD  G  ++I++ LF+ E+L    P              +F
Sbjct: 79  NFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETKAP------------YRIF 126

Query: 73  KTTSFTSFIRQLNLYGFRKVVLGGPGGG----------KPAGNGPLHHFHNPHFRRDQPQ 122
           +T +  SF+RQLNLYGF K+                  + +    L  ++NP+F+R  PQ
Sbjct: 127 QTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKFYYNPNFKRGYPQ 186

Query: 123 LLVHLKRLTSANKA 136
           LLV +KR      A
Sbjct: 187 LLVRVKRRIGVKNA 200


>gi|32526913 heat shock transcription factor, Y linked 2 isoform 1
           [Homo sapiens]
          Length = 401

 Score = 79.7 bits (195), Expect = 7e-15
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 22/134 (16%)

Query: 13  NFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPELF 72
           NFP KLW++V S +++SI WD  G  ++I++ LF+ E+L    P              +F
Sbjct: 79  NFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETKAP------------YRIF 126

Query: 73  KTTSFTSFIRQLNLYGFRKVVLGGPGGG----------KPAGNGPLHHFHNPHFRRDQPQ 122
           +T +  SF+RQLNLYGF K+                  + +    L  ++NP+F+R  PQ
Sbjct: 127 QTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKFYYNPNFKRGYPQ 186

Query: 123 LLVHLKRLTSANKA 136
           LLV +KR      A
Sbjct: 187 LLVRVKRRIGVKNA 200


>gi|169216697 PREDICTED: heat shock transcription factor family, X
           linked 2 [Homo sapiens]
          Length = 423

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 83/277 (29%), Positives = 110/277 (39%), Gaps = 55/277 (19%)

Query: 4   LLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTA 63
           LLS P     FP KLWRLV+S ++ SI WD  G   +I+Q LFE E+L            
Sbjct: 94  LLSLP-----FPQKLWRLVSSNQFSSIWWDDSGACRVINQKLFEKEILK----------- 137

Query: 64  GAGAEPELFKTTSFTSFIRQLNLYGFRKV------VLGGPGGGKPAGN--GPLHHFHNPH 115
                 ++F TTS  SF RQLNLYGFRK               K   +    L  + +P+
Sbjct: 138 -RDVAHKVFATTSIKSFFRQLNLYGFRKRRQCTFRTFTRIFSAKRLVSILNKLEFYCHPY 196

Query: 116 FRRDQPQLLVHLKRLTSANKAKLAAGLEVP-----CRPPNRFQRLLITSASAATAPLQHQ 170
           F+RD P LLV +KR      A      + P     C  P        T     T+P ++ 
Sbjct: 197 FQRDSPHLLVRMKRRVGVKSAPRHQEEDKPEAAGSCLAP------ADTEQQDHTSPNEND 250

Query: 171 QPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPLKGLDRTPV--PH 228
           Q  P      EP GP      +   R  S  P + V  P    ++      D +PV  P 
Sbjct: 251 QVTP---QHREPAGP------NTQIRSGSAPPATPVMVPDSAVAS------DNSPVTQPA 295

Query: 229 RIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEV 265
             W      H   V   P      +PF  +   PT++
Sbjct: 296 GEWSEGSQAHVTPVAAVP--GPAALPFLYVPGSPTQM 330


>gi|7706603 heat shock transcription factor family, X linked 1 [Homo
           sapiens]
          Length = 423

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 83/277 (29%), Positives = 110/277 (39%), Gaps = 55/277 (19%)

Query: 4   LLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTA 63
           LLS P     FP KLWRLV+S ++ SI WD  G   +I+Q LFE E+L            
Sbjct: 94  LLSLP-----FPQKLWRLVSSNQFSSIWWDDSGACRVINQKLFEKEILK----------- 137

Query: 64  GAGAEPELFKTTSFTSFIRQLNLYGFRKV------VLGGPGGGKPAGN--GPLHHFHNPH 115
                 ++F TTS  SF RQLNLYGFRK               K   +    L  + +P+
Sbjct: 138 -RDVAHKVFATTSIKSFFRQLNLYGFRKRRQCTFRTFTRIFSAKRLVSILNKLEFYCHPY 196

Query: 116 FRRDQPQLLVHLKRLTSANKAKLAAGLEVP-----CRPPNRFQRLLITSASAATAPLQHQ 170
           F+RD P LLV +KR      A      + P     C  P        T     T+P ++ 
Sbjct: 197 FQRDSPHLLVRMKRRVGVKSAPRHQEEDKPEAAGSCLAP------ADTEQQDHTSPNEND 250

Query: 171 QPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPLKGLDRTPV--PH 228
           Q  P      EP GP      +   R  S  P + V  P    ++      D +PV  P 
Sbjct: 251 QVTP---QHREPAGP------NTQIRSGSAPPATPVMVPDSAVAS------DNSPVTQPA 295

Query: 229 RIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEV 265
             W      H   V   P      +PF  +   PT++
Sbjct: 296 GEWSEGSQAHVTPVAAVP--GPAALPFLYVPGSPTQM 330


>gi|24211017 heat shock transcription factor, Y-linked 1 isoform 2
           [Homo sapiens]
          Length = 203

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 12/80 (15%)

Query: 13  NFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPELF 72
           NFP KLW++V S +++SI WD  G  ++I++ LF+ E+L    P              +F
Sbjct: 79  NFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETKAP------------YRIF 126

Query: 73  KTTSFTSFIRQLNLYGFRKV 92
           +T +  SF+RQLNLYGF K+
Sbjct: 127 QTDAIKSFVRQLNLYGFSKI 146


>gi|50312659 heat shock transcription factor, Y linked 2 isoform 2
           [Homo sapiens]
          Length = 203

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 12/80 (15%)

Query: 13  NFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPELF 72
           NFP KLW++V S +++SI WD  G  ++I++ LF+ E+L    P              +F
Sbjct: 79  NFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETKAP------------YRIF 126

Query: 73  KTTSFTSFIRQLNLYGFRKV 92
           +T +  SF+RQLNLYGF K+
Sbjct: 127 QTDAIKSFVRQLNLYGFSKI 146


>gi|207113147 heat shock transcription factor 2 isoform b [Homo
           sapiens]
          Length = 518

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 20/124 (16%)

Query: 14  FPAKLWRLVNSPRYRS-IRWDGRGEGLLI-DQPLFEAELLSPPGPGGGGGTAGAGAEPEL 71
           F +KLW LV        I W   G+  L+ D+  F  E+L                 P+ 
Sbjct: 10  FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEIL-----------------PKY 52

Query: 72  FKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQPQLLVHLKRLT 131
           FK  +  SF+RQLN+YGFRKVV    G  K   +GP+  F +P+F++ Q  LL ++KR  
Sbjct: 53  FKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPV-EFQHPYFKQGQDDLLENIKRKV 111

Query: 132 SANK 135
           S++K
Sbjct: 112 SSSK 115


>gi|4758568 heat shock transcription factor 2 isoform a [Homo
           sapiens]
          Length = 536

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 20/124 (16%)

Query: 14  FPAKLWRLVNSPRYRS-IRWDGRGEGLLI-DQPLFEAELLSPPGPGGGGGTAGAGAEPEL 71
           F +KLW LV        I W   G+  L+ D+  F  E+L                 P+ 
Sbjct: 10  FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEIL-----------------PKY 52

Query: 72  FKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQPQLLVHLKRLT 131
           FK  +  SF+RQLN+YGFRKVV    G  K   +GP+  F +P+F++ Q  LL ++KR  
Sbjct: 53  FKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPV-EFQHPYFKQGQDDLLENIKRKV 111

Query: 132 SANK 135
           S++K
Sbjct: 112 SSSK 115


>gi|5031767 heat shock transcription factor 1 [Homo sapiens]
          Length = 529

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 51/134 (38%), Positives = 66/134 (49%), Gaps = 26/134 (19%)

Query: 11  PNNFPA---KLWRLVNSPRYRS-IRWDGRGEGL-LIDQPLFEAELLSPPGPGGGGGTAGA 65
           P+N PA   KLW LV+ P   + I W   G    + DQ  F  E+L              
Sbjct: 12  PSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVL-------------- 57

Query: 66  GAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGG-GKPAGNGPLHHFHNPHFRRDQPQLL 124
              P+ FK  +  SF+RQLN+YGFRKVV    GG  KP  +     F +P F R Q QLL
Sbjct: 58  ---PKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDT--EFQHPCFLRGQEQLL 112

Query: 125 VHLKR-LTSANKAK 137
            ++KR +TS +  K
Sbjct: 113 ENIKRKVTSVSTLK 126


>gi|100913209 heat shock transcription factor 4 isoform b [Homo
           sapiens]
          Length = 492

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 49/136 (36%), Positives = 62/136 (45%), Gaps = 23/136 (16%)

Query: 3   ALLSTPINPNNFPA---KLWRLVNSPRY-RSIRWDGRGEGLLI-DQPLFEAELLSPPGPG 57
           A L T   P+  PA   KLW LV  P     IRW   G   L+ DQ  F  E+L      
Sbjct: 6   AALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVL------ 59

Query: 58  GGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFR 117
                      P+ FK ++  SF+RQLN+YGFRKVV    GG        +  F +P F 
Sbjct: 60  -----------PQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHV-EFQHPSFV 107

Query: 118 RDQPQLLVHLKRLTSA 133
           R + QLL  ++R   A
Sbjct: 108 RGREQLLERVRRKVPA 123


>gi|100913211 heat shock transcription factor 4 isoform a [Homo
           sapiens]
          Length = 462

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 49/136 (36%), Positives = 62/136 (45%), Gaps = 23/136 (16%)

Query: 3   ALLSTPINPNNFPA---KLWRLVNSPRY-RSIRWDGRGEGLLI-DQPLFEAELLSPPGPG 57
           A L T   P+  PA   KLW LV  P     IRW   G   L+ DQ  F  E+L      
Sbjct: 6   AALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVL------ 59

Query: 58  GGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFR 117
                      P+ FK ++  SF+RQLN+YGFRKVV    GG        +  F +P F 
Sbjct: 60  -----------PQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHV-EFQHPSFV 107

Query: 118 RDQPQLLVHLKRLTSA 133
           R + QLL  ++R   A
Sbjct: 108 RGREQLLERVRRKVPA 123


>gi|21070967 neurexin 1 isoform beta precursor [Homo sapiens]
          Length = 442

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 11/65 (16%)

Query: 48  AELLSPPGPGGGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGP 107
           AEL SP G GGGGG  GAG    L        +I  L L G    +LG   G    G   
Sbjct: 10  AELGSPGGGGGGGGGGGAGGRLALL-------WIVPLTLSG----LLGVAWGASSLGAHH 58

Query: 108 LHHFH 112
           +HHFH
Sbjct: 59  IHHFH 63


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 37.4 bits (85), Expect = 0.039
 Identities = 74/309 (23%), Positives = 111/309 (35%), Gaps = 44/309 (14%)

Query: 147  RPPNRFQRLLITSASAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCV 206
            R P+ + R L+T A   + P   + P  P     +P+G V+     ++ RR S+ PY   
Sbjct: 2021 RIPDSYARPLLTPAPLDSGPGPFKTPMQPPPSSQDPYGSVS-----QASRRLSVDPYERP 2075

Query: 207  S-TP------SHDHSTYPLKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQ 259
            + TP      SH+ S  P      TP P     N    HP     S  FS  G     + 
Sbjct: 2076 ALTPRPIDNFSHNQSNDPYSQPPLTPHPA---VNESFAHP-----SRAFSQPG----TIS 2123

Query: 260  RFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAV----LQCCS 315
            R  ++  Y+  P T    V    Q   SS    SN  P +Q      PT V     Q  +
Sbjct: 2124 RPTSQDPYSQPPGTPRPVVDSYSQ---SSGTARSNTDPYSQPPGTPRPTTVDPYSQQPQT 2180

Query: 316  PTHMDALSSCVTP-----NASSYAHCNYFQNPSMQSSYPVEFLPSNWPCSTTDENTKTEV 370
            P         VTP     ++  YAH      P +  S P    P+      ++  T++ +
Sbjct: 2181 PRPSTQTDLFVTPVTNQRHSDPYAHPPGTPRPGI--SVPYSQPPATPRPRISEGFTRSSM 2238

Query: 371  NLEAVFQIVDEL-----HSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNPCSASQ 425
                +    D       +  P L    V P +  C  +P   G  +    +  +P +A  
Sbjct: 2239 TRPVLMPNQDPFLQAAQNRGPALPGPLVRPPDT-CSQTPRPPGPGLSDTFSRVSPSAARD 2297

Query: 426  ASQLEPLTP 434
                 P+TP
Sbjct: 2298 PYDQSPMTP 2306


>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
          Length = 1288

 Score = 37.0 bits (84), Expect = 0.052
 Identities = 57/241 (23%), Positives = 84/241 (34%), Gaps = 23/241 (9%)

Query: 54   PGPGGGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPA--GNGPLHHF 111
            PGPG  G T    A P+L  + S    +   +     K    GPG G+ +     P    
Sbjct: 865  PGPGEAGPTRRTWASPKLRASVSPLDLLPSKSTASLTKPHSTGPGSGRSSCQPRKPALDL 924

Query: 112  HNPHFRRDQPQL----LVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASAATAPL 167
             +P      P++        ++ TS  +    A       PP+   R   TS S+   P 
Sbjct: 925  SSPPATSQSPEVKGGTWSQAEKATSLYRQPRKAIAWHHSGPPSGQNR---TSESSLARPR 981

Query: 168  QHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPLKGLDRTPVP 227
            Q ++  PP G +  P     V Q  +  RR SL        PS      P     +TP  
Sbjct: 982  QSRERSPPVGRKASPTRTHWVPQADK--RRRSL--------PSSYRPAQPSPSAVQTPPS 1031

Query: 228  HRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQGPQTMVS 287
              +    L     +  TSP    K +P P  +  P +      PS  + H +  P   + 
Sbjct: 1032 PPVSPRVLSPPTTKRRTSPPHQPK-LPNPPPESAPAQCKV---PSPPTQHPEASPPFSIP 1087

Query: 288  S 288
            S
Sbjct: 1088 S 1088


>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
          Length = 500

 Score = 37.0 bits (84), Expect = 0.052
 Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 15/100 (15%)

Query: 37  EGLLIDQP---LFEAELLSPPGPGGGGGTAGAGAE----PELFK--TTSFTSFIRQLNLY 87
           + LL  QP        L +PPGPGGGGG AG GA+    P L +  T          + +
Sbjct: 218 QSLLYSQPGGFTVNGMLSAPPGPGGGGGGAGGGAQSLVHPGLVRGDTPELAEHHHHHHHH 277

Query: 88  GFRKV-----VLGGP-GGGKPAGNGPLHHFHNPHFRRDQP 121
                       G P  GG   G GP  + H+PH   D P
Sbjct: 278 AHPHPPHPHHAQGPPHHGGGGGGAGPGLNSHDPHSDEDTP 317



 Score = 34.3 bits (77), Expect = 0.33
 Identities = 40/163 (24%), Positives = 54/163 (33%), Gaps = 14/163 (8%)

Query: 55  GPGGGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNP 114
           G GGGGG AG G       + + TS   + +    + V      G   A NG  H   + 
Sbjct: 36  GGGGGGGGAGGGGGGMQPGSAAVTSGAYRGDPSSVKMVQSDFMQGAMAASNGG-HMLSHA 94

Query: 115 HFRRDQPQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASAATAPLQHQQPPP 174
           H      Q +  L    +A  A  AA +E              ++   A +P Q  QPPP
Sbjct: 95  H------QWVTALPHAAAAAAAAAAAAVEASSPWSG-------SAVGMAGSPQQPPQPPP 141

Query: 175 PAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYP 217
           P    P+  G       H         P      P   H  +P
Sbjct: 142 PPPQGPDVKGGAGRDDLHAGTALHHRGPPHLGPPPPPPHQGHP 184


>gi|91982772 mucin 17 [Homo sapiens]
          Length = 4493

 Score = 36.6 bits (83), Expect = 0.067
 Identities = 92/419 (21%), Positives = 139/419 (33%), Gaps = 55/419 (13%)

Query: 158  TSASAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYP 217
            TS  A+++P   +    P  P  E   P+A      +    S +  + +ST   D  T  
Sbjct: 1134 TSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTLVVSSEA--NTLSTTPVDSKTQV 1191

Query: 218  LKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQR----FPTEVTYTLQPST 273
                + +  P      S+        ++P  S      PV         T    T  P T
Sbjct: 1192 ATSTEASSPPPTAEVTSMPTSTPGERSTPLTSMPVRHTPVASSEASTLSTSPVDTSTPVT 1251

Query: 274  TSVHVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPTHMDALSSCVTPNASSY 333
            TS      P T   +S   S  T          P +     SP     L++ V       
Sbjct: 1252 TSAETSSSPTTAEGTSLPTST-TSEGSTLLTSIPVSTTLVTSPEASTLLTTPVDTKGPVV 1310

Query: 334  AHCNYFQNPSMQSSYPVEFLPSNWPCSTTDENTKTEVNLEAVFQIVDELHSSPKLEMVKV 393
                   N    S  P E   ++ P ST  E      ++     +V    +S  + ++  
Sbjct: 1311 T-----SNEVSSSPTPAE--GTSMPTSTYSEGRTPLTSIPVNTTLV----ASSAISILST 1359

Query: 394  EPVENQCP--------TSPSYRGQHILANSNNSN--------PCSASQASQLEPLTPVGS 437
             PV+N  P        +SP+      + NSN S         P S +     E  T   +
Sbjct: 1360 TPVDNSTPVTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIPVSTTPVVSSEASTLSAT 1419

Query: 438  DIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAAIQQAHVKLKEHLNHNPS 497
             + +   GT  A A S P + E I +I T+ P E  T  +S                 P 
Sbjct: 1420 PVDTSTPGTTSAEATSSPTTAEGI-SIPTSTPSEGKTPLKSI----------------PV 1462

Query: 498  PSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLISEMGPASKPSEDTGLAT 556
             ++ V   E    ST  VD+N    TS+  +  P+   G  I+     S PSE +   T
Sbjct: 1463 SNTPVANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIA----ISTPSEGSTALT 1517



 Score = 35.4 bits (80), Expect = 0.15
 Identities = 60/290 (20%), Positives = 109/290 (37%), Gaps = 23/290 (7%)

Query: 199  SLSPYSC----VSTPSHDHSTYPLKGLDRTPVPHRIWQ-NSLGMHPGQVETSPTFSDKGV 253
            SLSP +     + T S    T PL  +  +  P    + N+L   P    T  T S +  
Sbjct: 3378 SLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEAS 3437

Query: 254  PFPVLQRFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQC 313
              P +    +  T T    +T + +     T V+SS+  +  T     S        +  
Sbjct: 3438 SSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVASSEASTLSTTPVDTSTP------VTT 3491

Query: 314  CSPTHMDALSSCVTPNASSYAHCNYFQNPSMQSSYPVEFLP-SNWPCSTTDENTKTEVNL 372
             SPT+    ++ VT   +S A          + S P+  +P S  P ++++ +T +   +
Sbjct: 3492 SSPTNSSPTTAEVTSMPTSTAG---------EGSTPLTNMPVSTTPVASSEASTLSTTPV 3542

Query: 373  EAVFQIVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSN--NSNPCSASQASQLE 430
            ++   +     +S     ++V  +    P+  S     +L +S    S+  S      ++
Sbjct: 3543 DSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVD 3602

Query: 431  PLTPVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAA 480
              TPV +   S    T   V      +P  + T  T  PV  +++  S A
Sbjct: 3603 RSTPVTTSTQSNSTPTPPEVITLPMSTPSEVSTPLTIMPVSTTSVTISEA 3652



 Score = 32.7 bits (73), Expect = 0.97
 Identities = 72/361 (19%), Positives = 116/361 (32%), Gaps = 55/361 (15%)

Query: 244  TSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNY----TP-- 297
            TS   S   V    +    T    T  P TT       P T   +S + S Y    TP  
Sbjct: 1517 TSIPVSTTTVASSEINSLSTTPAVTSTPVTTYSQASSSPTTADGTSMQTSTYSEGSTPLT 1576

Query: 298  SAQYSQAYYPTAVLQCCSPTHMDA---------LSSCVTPNASSYAHCNYFQNPSMQSSY 348
            S   S     ++     S T +D+          SS  T   SS       +   + +S 
Sbjct: 1577 SLPVSTMLVVSSEANTLSTTPIDSKTQVTASTEASSSTTAEGSSMTISTPSEGSPLLTSI 1636

Query: 349  PVEFLPSNWPCSTTDENTKTEVNLEAVFQIVDELHSSPK--------------------- 387
            PV   P   P ++T   T  + N   +     E+ SSP                      
Sbjct: 1637 PVSTTPVASPEASTLSTTPVDSNSPVITST--EVSSSPTPAEGTSMPTSTYTEGRTPLTS 1694

Query: 388  ------------LEMVKVEPVENQCPTSPSYRGQHILANSNNSNPCSASQASQLEPLTPV 435
                        +  +   PV+N  P + S   +     S  ++  +++ +    PLT +
Sbjct: 1695 ITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSI 1754

Query: 436  GSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAAIQQAHVKLKEHLNHN 495
                   V+ +E +   + P       T  T      +T + ++       +    L   
Sbjct: 1755 PVSTTP-VLSSEASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTST 1813

Query: 496  PSPSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLISEMGPASKPSEDTGLA 555
            P   ++V   E    ST  VD+N    TS+  +  P+   G  I+     S PSE +   
Sbjct: 1814 PVSHTLVANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIA----TSTPSEGSTAL 1869

Query: 556  T 556
            T
Sbjct: 1870 T 1870


>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
           plakophilin-related arm-repeat protein) [Homo sapiens]
          Length = 1225

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 47/176 (26%), Positives = 64/176 (36%), Gaps = 24/176 (13%)

Query: 138 LAAGLEVPCRPPNRFQRLLITSASAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRR 197
           L +   +P  PP      L  S+S   AP      P    P   P G     +  R    
Sbjct: 234 LGSAFHLPDAPPAAAAAALYYSSSTLPAP------PRGGSPLAAPQGGSPT-KLQRGGSA 286

Query: 198 DSLSPYSCVSTPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPV 257
              + Y+     S   S   L     T  P  I  +S G+ P +V + PT        P+
Sbjct: 287 PEGATYAAPRGSSPKQSPSRLAKSYSTSSPINIVVSSAGLSPIRVTSPPTVQSTISSSPI 346

Query: 258 LQRFPTEVTY-TLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQ 312
            Q   T  TY TL P+   VH          +S++YS      ++SQ  Y TA LQ
Sbjct: 347 HQLSSTIGTYATLSPTKRLVH----------ASEQYS------KHSQELYATATLQ 386


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 479  AAIQQAHVKLKEHLNHNPSPSSVVFVQEGPPF-STHQVDANIKCQTSSRENILPSEQMGF 537
            AA+QQ  ++  +  NH P+ SSV     G  F S + VD+     T+   N+ P  ++G 
Sbjct: 4921 AAVQQLRIQPTKPPNHRPAESSVSTGSSGSSFGSGYSVDSEGSSSTAGETNLFPIPRIGK 4980

Query: 538  L-ISEMGPASKPSEDTGLA 555
            +  +   P  +P    GLA
Sbjct: 4981 MGQNGQEPVKQPGVGVGLA 4999


>gi|238859557 regulatory factor X1 [Homo sapiens]
          Length = 979

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 82/355 (23%), Positives = 125/355 (35%), Gaps = 65/355 (18%)

Query: 158 TSASAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYP 217
           T   AA  P Q  Q PP A P+P P  P A  Q           P +  +TP   + T  
Sbjct: 7   TELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQ--------PPQPPTAAATPQPQYVTEL 58

Query: 218 LKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVH 277
                +   P    Q    +      + PT    G P P     P    Y +      V 
Sbjct: 59  QSPQPQAQPPGGQKQYVTELPAVPAPSQPT----GAPTP----SPAPQQYIV------VT 104

Query: 278 VQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPTHMDALSSCVTPNASSYAHCN 337
           V +G    + +S+  S  +P +  SQ   PT V+Q    T    L    T   +   H +
Sbjct: 105 VSEG---AMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQ--TSVQAKPGHVS 159

Query: 338 YFQNPSMQSSYPVEFLPSNWPCSTTDENTKTEVNLEAVFQIVDELHSSPKLEMVKVEPVE 397
             Q  ++Q   P + LP+      +         +        ++HS P+          
Sbjct: 160 PLQLTNIQ--VPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPE---------- 207

Query: 398 NQCPTSPSYRGQHILANSNNSNPCSASQASQLEPLTPVGSDIMSFVVGTEQAVACSLPQS 457
            Q P         + ANS++S    A   +  + L   G    S  V  E++V  + PQ+
Sbjct: 208 -QSP---------VQANSSSSKTAGAPTGTVPQQLQVHGVQ-QSVPVTQERSVVQATPQA 256

Query: 458 PEYIYTIHTAQPVENSTIQESAAIQQAHVKLK-EHLNHNPSP----SSVVFVQEG 507
           P+         PV+  T+Q    +Q  HV  + + L   P P    S V +V+ G
Sbjct: 257 PK-------PGPVQPLTVQ---GLQPVHVAQEVQQLQQVPVPHVYSSQVQYVEGG 301


>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
          Length = 1142

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 77/353 (21%), Positives = 133/353 (37%), Gaps = 51/353 (14%)

Query: 165 APLQHQQPPPPAGPRPEPHGPVAVGQFHRSFR-RDSLSP-YSCVSTPSHDHSTYPLKGLD 222
           +P    Q PP       PH       F +S +  DSLSP Y   S P  + S  PL    
Sbjct: 560 SPHYFPQSPPQGEDSLSPH------YFPQSPQGEDSLSPHYFPQSPPQGEDSMSPLY-FP 612

Query: 223 RTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQGP 282
           ++P+    +Q+SL   P  + +S T S     FP   + P E      P  + +H  Q P
Sbjct: 613 QSPLQGEEFQSSL-QSPVSICSSSTPSSLPQSFPESSQSPPE-----GPVQSPLHSPQSP 666

Query: 283 QTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPTH-MDALSSCVTPNA----------- 330
              + S     +   + +   +  P  + Q  SP    D+LSS   P +           
Sbjct: 667 PEGMHSQSPLQSPESAPEGEDSLSPLQIPQ--SPLEGEDSLSSLHFPQSPPEWEDSLSPL 724

Query: 331 -----------------SSYAHCNYFQNPSMQSSYPVE-FLPSNWPCSTTDENTKTEVNL 372
                            S  + C+   + S+  S+P     P   P  +  +   +    
Sbjct: 725 HFPQFPPQGEDFQSSLQSPVSICSSSTSLSLPQSFPESPQSPPEGPAQSPLQRPVSSFFS 784

Query: 373 EAVFQIVDELHSSPKL--EMVKVEPVENQCPTSPSYRGQHILANSNNSN-PCSASQA-SQ 428
             +  ++   H SP+   E     P+++   + PS     +  +S  S+ P S S + S+
Sbjct: 785 YTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSSTSSSLSK 844

Query: 429 LEPLTPVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAAI 481
             P +P+ S ++SF   T  +       SP   YT  +   +E+ ++ +S ++
Sbjct: 845 SSPESPLQSPVISFSSSTSLSPFSEESSSPVDEYTSSSDTLLESDSLTDSESL 897


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%)

Query: 158 TSASAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYP 217
           +S S +T   +  QP     P P P  P          R  S SP       S   ST P
Sbjct: 664 SSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQR---RQSPSPSTRP 720

Query: 218 LKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVH 277
           ++ + RTP P +I + +          S + S  G P P  ++ P               
Sbjct: 721 IRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPP--------------- 765

Query: 278 VQQGPQTMVSSSQKYSNYTPSAQYSQAYYPT 308
               P + V S    +N++P+    +A  PT
Sbjct: 766 ---APPSPVQSQSPSTNWSPAVPVKKAKSPT 793



 Score = 29.6 bits (65), Expect = 8.2
 Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 17/106 (16%)

Query: 148 PPNRFQRLLITSASAATAPLQHQQPPPPAGPRPEP-HGPVAVGQFHRSFRRDSLSPYSCV 206
           PP + +RL    + +A+ P +  +P PPA P P+  H P           R S+SP    
Sbjct: 381 PPRKTRRL----SPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSP-GRT 435

Query: 207 STPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKG 252
           S     H     KG ++   P      S    P +VE S +  DKG
Sbjct: 436 SGKVTKH-----KGTEKRESP------SPAPKPRKVELSESEEDKG 470


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 25/186 (13%)

Query: 242  VETSPTFSDKGVPFPVLQRFP-TEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQ 300
            ++TS T S +G   PV QRFP +E T T+  ST  V  Q  P    +SS       P+  
Sbjct: 5878 LDTSSTASWEGTHSPVTQRFPHSEETTTMSRSTKGVSWQSPPSVEETSSPSSPVPLPAIT 5937

Query: 301  YSQAYY-------PTAVLQCCS-------------PTHMDALSSCVTPNASSYAHCNYFQ 340
               + Y       PT+ L   S              TH + ++S + P+ASS++      
Sbjct: 5938 SHSSLYSAVSGSSPTSALPVTSLLTSGRRKTIDMLDTHSELVTSSL-PSASSFSG-EILT 5995

Query: 341  NPSMQSSYPVEFLPSNWPCSTTDENTKTEVNLEAVFQIVDELHSSPKL--EMVKVEPVEN 398
            + +  ++  + F  +    +    N+  +++           H+ PK+   M++   V  
Sbjct: 5996 SEASTNTETIHFSENTAETNMGTTNSMHKLHSSVSIHSQPSGHTPPKVTGSMMEDAIVST 6055

Query: 399  QCPTSP 404
              P SP
Sbjct: 6056 STPGSP 6061



 Score = 29.6 bits (65), Expect = 8.2
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 13/140 (9%)

Query: 262  PTEVTYTLQPSTTSVHV-----QQGPQTM---VSSSQKYSNYTPSAQYS---QAYYPTAV 310
            PT  TY    +T S+H+      + P T+   ++S  K  +YTP    S     +  TA 
Sbjct: 1237 PTLSTYPESTNTPSIHLGAHASSESPSTIKLTMASVVKPGSYTPLTFPSIETHIHVSTAR 1296

Query: 311  LQCCSPTHMDALSSCVTPNASSYAHCNYFQ--NPSMQSSYPVEFLPSNWPCSTTDENTKT 368
            +   S +  +  +   T   S++    Y    +P   SS  V    S     TT+ + KT
Sbjct: 1297 MAYSSGSSPEMTAPGETNTGSTWDPTTYITTTDPKDTSSAQVSTPHSVRTLRTTENHPKT 1356

Query: 369  EVNLEAVFQIVDELHSSPKL 388
            E    A +    ++ SSP L
Sbjct: 1357 ESATPAAYSGSPKISSSPNL 1376


>gi|19718780 semaphorin 6B precursor [Homo sapiens]
          Length = 888

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 43/155 (27%), Positives = 57/155 (36%), Gaps = 33/155 (21%)

Query: 34  GRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVV 93
           G GE +L    L E     P G GGGGG  GAG  PE        + +  L   G+ K  
Sbjct: 643 GAGEAVLSVSRLGERRAQGPGGRGGGGG-GGAGVPPE--------ALLAPLMQNGWAKAT 693

Query: 94  L--GGPGGGKPAGNGPLHHFHNPHFRRDQPQLLVHLKRLTSANKAKLAAGLEV-----PC 146
           L  GGP            H  +        Q  +  KRL + +    A G        P 
Sbjct: 694 LLQGGP------------HDLDSGLLPTPEQTPLPQKRLPTPHPHPHALGPRAWDHGHPL 741

Query: 147 RPPNRFQRLLITSASAATAPLQHQQPPPPAGPRPE 181
            P +    LL+ + + A      +QPP P  P P+
Sbjct: 742 LPASASSSLLLLAPARAP-----EQPPAPGEPTPD 771


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
            sapiens]
          Length = 1362

 Score = 34.7 bits (78), Expect = 0.26
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 149  PNRFQRLLITSASAATAPLQHQQPP-PPAG---PRPEPHGPVAVGQFHRSFRRDSLSPYS 204
            P   Q +  ++      P Q QQPP PP G   P P+P  P  V Q H S R     PYS
Sbjct: 996  PVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYS 1055



 Score = 29.6 bits (65), Expect = 8.2
 Identities = 52/201 (25%), Positives = 64/201 (31%), Gaps = 32/201 (15%)

Query: 107  PLHHFHNPHFRRDQPQLLVHL-------------KRLTSANKAKLAAGLEVPCRPPNRFQ 153
            P+ HF  P     QP+L  HL             +    +  A   A  + P RP NR  
Sbjct: 819  PIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAA 878

Query: 154  RLLITSASA-ATAPLQHQQP----PPPAGP-------RPEPHGPVAVGQFHRSFRRDSLS 201
             L    A   A +P   Q P    PP A P          P  P+   Q     ++    
Sbjct: 879  ALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKV 938

Query: 202  PYSCVSTPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRF 261
                   PS    + P   L   P PH   Q  L   P      P    +  P P  Q  
Sbjct: 939  QPPTPLLPSVKVQSQPPPPLP--PPPHPSVQQQLQQQP-----PPPPPPQPQPPPQQQHQ 991

Query: 262  PTEVTYTLQPSTTSVHVQQGP 282
            P      LQP   S H+QQ P
Sbjct: 992  PPPRPVHLQPMQFSTHIQQPP 1012


>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
          Length = 1352

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 39/134 (29%), Positives = 46/134 (34%), Gaps = 33/134 (24%)

Query: 56  PGGGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFH--N 113
           PG G   A +G E          SF ++L    FR    GG G G P  +GP       +
Sbjct: 7   PGSGPPAAASGKEKR--------SFSKRL----FRSGRAGGGGAGGPGASGPAAPSSPSS 54

Query: 114 PHFRRDQPQLLVH-------LKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASAATAP 166
           P   R     +         L  L+S   A    GL   C PP             A AP
Sbjct: 55  PSSARSVGSFMSRVLKTLSTLSHLSSEGAAPDRGGLR-SCFPPG-----------PAAAP 102

Query: 167 LQHQQPPPPAGPRP 180
                PPPPA P P
Sbjct: 103 TPPPCPPPPASPAP 116


>gi|151301154 mucin 6, gastric [Homo sapiens]
          Length = 2439

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 79/346 (22%), Positives = 120/346 (34%), Gaps = 54/346 (15%)

Query: 149  PNRFQRLLITSASAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVST 208
            P+    ++ T    AT+   H  P    G  P P    A G  H +     ++P +  S 
Sbjct: 1850 PSTHTVIIPTHTQMATSASIHSMP---TGTIPPPTTIKATGSTHTA---PPMTPTT--SG 1901

Query: 209  PSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPGQVETS-----PTFSDKGVPFPVLQ---- 259
             S   S++       T +P+     S   HP    TS     P  +  G   PV      
Sbjct: 1902 TSQSPSSFSTAKTS-TSLPYH---TSSTHHPEVTPTSTTNITPKHTSTGTRTPVAHTTSA 1957

Query: 260  ---RFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSP 316
               R PT  T    P+ +S     GP T  S     +  TPS       +P   L    P
Sbjct: 1958 SSSRLPTPFTTHSPPTGSSPFSSTGPMTATSFQTTTTYPTPS-------HPQTTL----P 2006

Query: 317  THMDALS-SCVTPNASSYAHCNYFQNPSMQS--SYPVEFLPSNWPCSTTDENTKTEVNLE 373
            TH+   S S VTP+  +     + Q  +  S  S P   +P       T  +T T   + 
Sbjct: 2007 THVPPFSTSLVTPSTHTVIITTHTQMATSASIHSTPTGTVPPPTTLKATG-STHTAPPMT 2065

Query: 374  AVFQIVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNPCSASQASQLEPLT 433
                   + HSS                +S        L  +++S P S+   +QL  L+
Sbjct: 2066 VTTSGTSQTHSS----------FSTATASSSFISSSSWLPQNSSSRPPSSPITTQLPHLS 2115

Query: 434  PVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESA 479
               +      V T   ++ S   SP    T+ +  P  +S+ Q S+
Sbjct: 2116 SATTP-----VSTTNQLSSSFSPSPSAPSTVSSYVPSSHSSPQTSS 2156



 Score = 30.4 bits (67), Expect = 4.8
 Identities = 47/204 (23%), Positives = 71/204 (34%), Gaps = 48/204 (23%)

Query: 145  PCRPPNRFQRLLITSASAATAPLQHQQPPPPAGPRPEPH-GPVAVGQFHRSFRRDSLSPY 203
            P RP         T+    T    H    PP    P P  GPV    FH +         
Sbjct: 1380 PTRPTATETTQTRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHAT--------- 1430

Query: 204  SCVSTPSHDHSTY-----PLKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVL 258
            +   TPSH  +T      P      TP  H +      + P   + + + S+   P    
Sbjct: 1431 TTYPTPSHPETTLPTHVPPFSTSLVTPSTHTV------ITPTHAQMATSASNHSAP---- 1480

Query: 259  QRFPTEVTYTLQPSTT-----SVHVQQG-PQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQ 312
                   T T+ P TT     S H       T   +SQ +S+++ +        PT++  
Sbjct: 1481 -------TGTIPPPTTLKATGSTHTAPPITPTTSGTSQAHSSFSTNKT------PTSLHS 1527

Query: 313  CCSPTHMDAL----SSCVTPNASS 332
              S TH   +    ++ +TPN +S
Sbjct: 1528 HTSSTHHPEVTPTSTTTITPNPTS 1551


>gi|26667227 eyes absent 2 isoform a [Homo sapiens]
          Length = 538

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 49/210 (23%), Positives = 74/210 (35%), Gaps = 24/210 (11%)

Query: 164 TAPLQHQQPPPPAGPRPEPHGP----VAVGQFHRSFRRDSLSPYSCVSTPSHDHS--TYP 217
           +APL+  Q    + PR  P  P     A GQ   S      +PY+    P+  +   +Y 
Sbjct: 41  SAPLRVSQLFSRSCPRVLPRQPSTAMAAYGQTQYSAGIQQATPYTAYPPPAQAYGIPSYS 100

Query: 218 LKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVH 277
           +K  D           SL   PGQ      F   G  F       +  TY +  +T    
Sbjct: 101 IKTED-----------SLNHSPGQ----SGFLSYGSSFSTSPTGQSPYTYQMHGTTGFYQ 145

Query: 278 VQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPTHMDALSSCVTP-NASSYAHC 336
              G          + +Y     + Q+ YP       +P ++ A S C +P + S+Y   
Sbjct: 146 GGNGLGNAAGFGSVHQDYPSYPGFPQSQYPQYYGSSYNPPYVPASSICPSPLSTSTYVLQ 205

Query: 337 NYFQNPSMQSSYPV--EFLPSNWPCSTTDE 364
               N   QSS  +  E+   N P +   E
Sbjct: 206 EASHNVPNQSSESLAGEYNTHNGPSTPAKE 235


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.130    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,022,499
Number of Sequences: 37866
Number of extensions: 1652497
Number of successful extensions: 9096
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 8686
Number of HSP's gapped (non-prelim): 472
length of query: 596
length of database: 18,247,518
effective HSP length: 108
effective length of query: 488
effective length of database: 14,157,990
effective search space: 6909099120
effective search space used: 6909099120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.