Guide to the Human Genome
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Name: EYA2 Sequence: fasta or formatted (538aa) NCBI GI: 26667227
Description:

eyes absent 2 isoform a

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [514aa] eyes absent 2 isoform c
alt mRNA [538aa] eyes absent 2 isoform a
alt mRNA [538aa] eyes absent 2 isoform a
alt prot [543aa] eyes absent 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         37           2
 C cysteine            1.5          8           1
 D aspartate           5.2         28           2
 E glutamate           4.6         25           3
 F phenylalanine       3.7         20           2
 G glycine             8.2         44           2
 H histidine           2.8         15           1
 I isoleucine          3.9         21           3
 K lysine              3.5         19           2
 L leucine             8.7         47           2
 M methionine          1.9         10           2
 N asparagine          4.6         25           2
 P proline             6.3         34           3
 Q glutamine           4.5         24           2
 R arginine            4.8         26           2
 S serine             10.6         57           2
 T threonine           6.7         36           3
 V valine              5.2         28           2
 W tryptophan          1.1          6           1
 Y tyrosine            5.2         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eyes absent 2 isoform a 
EYA2                  1.000   eyes absent 2 isoform b 
EYA2                  1.000   eyes absent 2 isoform a 
EYA2                  1.000   eyes absent 2 isoform a 
EYA2                  0.943   eyes absent 2 isoform c 
EYA1                  0.611   eyes absent 1 isoform b 
EYA1                  0.611   eyes absent 1 isoform b 
EYA1                  0.611   eyes absent 1 isoform a 
EYA1                  0.557   eyes absent 1 isoform c 
EYA4                  0.540   eyes absent 4 isoform b 
EYA4                  0.540   eyes absent 4 isoform a 
EYA4                  0.522   eyes absent 4 isoform d 
EYA3                  0.403   eyes absent 3 
EWSR1                 0.026   Ewing sarcoma breakpoint region 1 isoform 4 
FUS                   0.025   fusion (involved in t(12;16) in malignant liposarcoma...
TAF15                 0.022   TBP-associated factor 15 isoform 2 
EWSR1                 0.019   Ewing sarcoma breakpoint region 1 isoform 5 
EWSR1                 0.019   Ewing sarcoma breakpoint region 1 isoform 3 
EWSR1                 0.019   Ewing sarcoma breakpoint region 1 isoform 2 
EWSR1                 0.018   Ewing sarcoma breakpoint region 1 isoform 1 
FLG2                  0.016   filaggrin family member 2 
TBX15                 0.016   T-box 15 
SETD5                 0.014   SET domain containing 5 
NUP214                0.013   nucleoporin 214kDa 
ZMIZ2                 0.012   zinc finger, MIZ-type containing 2 isoform 1 
ILF3                  0.011   interleukin enhancer binding factor 3 isoform d [Ho...
ILF3                  0.011   interleukin enhancer binding factor 3 isoform a [Hom...
SS18L1                0.011   SS18-like protein 1 
TCF12                 0.010   transcription factor 12 isoform c 
DAB2IP                0.009   disabled homolog 2 interacting protein isoform 2 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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