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Search of human proteins with 122937193
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|122937193 DNB5 [Homo sapiens]
(748 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|122937193 DNB5 [Homo sapiens] 1515 0.0
gi|122937259 solute carrier family 45, member 4 [Homo sapiens] 358 1e-98
gi|61635915 membrane-associated transporter protein isoform a [H... 217 4e-56
gi|61636000 membrane-associated transporter protein isoform b [H... 217 4e-56
gi|14916437 prostein [Homo sapiens] 111 3e-24
gi|56549694 enabled homolog isoform a [Homo sapiens] 44 7e-04
gi|39930375 enabled homolog isoform b [Homo sapiens] 44 7e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.013
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.013
gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo s... 39 0.013
gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa... 39 0.013
gi|47132519 Ras association and pleckstrin homology domains 1 is... 38 0.039
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.067
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 37 0.067
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 37 0.087
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 37 0.087
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 37 0.087
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 36 0.11
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 36 0.15
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 36 0.15
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 36 0.15
gi|56676337 transmembrane protein 28 [Homo sapiens] 36 0.15
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.19
gi|33356148 formin-like 1 [Homo sapiens] 35 0.19
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 35 0.25
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens] 35 0.25
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens] 35 0.25
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 35 0.33
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 35 0.33
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 35 0.33
>gi|122937193 DNB5 [Homo sapiens]
Length = 748
Score = 1515 bits (3922), Expect = 0.0
Identities = 748/748 (100%), Positives = 748/748 (100%)
Query: 1 MIPAASSTPPGDALFPSVAPQDFWRSQVTGYSGSVTRHLSHRANNFKRHPKRRKCIRPSP 60
MIPAASSTPPGDALFPSVAPQDFWRSQVTGYSGSVTRHLSHRANNFKRHPKRRKCIRPSP
Sbjct: 1 MIPAASSTPPGDALFPSVAPQDFWRSQVTGYSGSVTRHLSHRANNFKRHPKRRKCIRPSP 60
Query: 61 PPPPNTPCPLELVDFGDLHPQRSFRELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQ 120
PPPPNTPCPLELVDFGDLHPQRSFRELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQ
Sbjct: 61 PPPPNTPCPLELVDFGDLHPQRSFRELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQ 120
Query: 121 LYSLVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGI 180
LYSLVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGI
Sbjct: 121 LYSLVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGI 180
Query: 181 ALADVTGNHKWGLLLTVCGVVLMDFSADSADNPSHAYMMDVCSPADQDRGLNIHALLAGL 240
ALADVTGNHKWGLLLTVCGVVLMDFSADSADNPSHAYMMDVCSPADQDRGLNIHALLAGL
Sbjct: 181 ALADVTGNHKWGLLLTVCGVVLMDFSADSADNPSHAYMMDVCSPADQDRGLNIHALLAGL 240
Query: 241 GGGFGYVVGGIHWDKTGFGRALGGQLRVIYLFTAVTLSVTTVLTLVSIPERPLRPPSEKR 300
GGGFGYVVGGIHWDKTGFGRALGGQLRVIYLFTAVTLSVTTVLTLVSIPERPLRPPSEKR
Sbjct: 241 GGGFGYVVGGIHWDKTGFGRALGGQLRVIYLFTAVTLSVTTVLTLVSIPERPLRPPSEKR 300
Query: 301 AAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPKYGSFISRDSSLTG 360
AAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPKYGSFISRDSSLTG
Sbjct: 301 AAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPKYGSFISRDSSLTG 360
Query: 361 ISEFASSFGTANIDSVLIDCFTGGHDSYLAIPGSVPRPPISVSFPRAPDGFYRQDRGLLE 420
ISEFASSFGTANIDSVLIDCFTGGHDSYLAIPGSVPRPPISVSFPRAPDGFYRQDRGLLE
Sbjct: 361 ISEFASSFGTANIDSVLIDCFTGGHDSYLAIPGSVPRPPISVSFPRAPDGFYRQDRGLLE 420
Query: 421 GREGALTSGCDGDILRVGSLDTSKPRSSGILKRPQTLAIPDAAGGGGPETSRRRNVTFSQ 480
GREGALTSGCDGDILRVGSLDTSKPRSSGILKRPQTLAIPDAAGGGGPETSRRRNVTFSQ
Sbjct: 421 GREGALTSGCDGDILRVGSLDTSKPRSSGILKRPQTLAIPDAAGGGGPETSRRRNVTFSQ 480
Query: 481 QVANILLNGVKYESELTGSSERAEQPLSVGRLCSTICNMPKALRTLCVNHFLGWLSFEGM 540
QVANILLNGVKYESELTGSSERAEQPLSVGRLCSTICNMPKALRTLCVNHFLGWLSFEGM
Sbjct: 481 QVANILLNGVKYESELTGSSERAEQPLSVGRLCSTICNMPKALRTLCVNHFLGWLSFEGM 540
Query: 541 LLFYTDFMGEVVFQGDPKAPHTSEAYQKYNSGVTMGCWGMCIYAFSAAFYSAILEKLEEF 600
LLFYTDFMGEVVFQGDPKAPHTSEAYQKYNSGVTMGCWGMCIYAFSAAFYSAILEKLEEF
Sbjct: 541 LLFYTDFMGEVVFQGDPKAPHTSEAYQKYNSGVTMGCWGMCIYAFSAAFYSAILEKLEEF 600
Query: 601 LSVRTLYFIAYLAFGLGTGLATLSRNLYVVLSLCITYGILFSTLCTLPYSLLCDYYQSKK 660
LSVRTLYFIAYLAFGLGTGLATLSRNLYVVLSLCITYGILFSTLCTLPYSLLCDYYQSKK
Sbjct: 601 LSVRTLYFIAYLAFGLGTGLATLSRNLYVVLSLCITYGILFSTLCTLPYSLLCDYYQSKK 660
Query: 661 FAGSSADGTRRGMGVDISLLSCQYFLAQILVSLVLGPLTSAVGSANGVMYFSSLVSFLGC 720
FAGSSADGTRRGMGVDISLLSCQYFLAQILVSLVLGPLTSAVGSANGVMYFSSLVSFLGC
Sbjct: 661 FAGSSADGTRRGMGVDISLLSCQYFLAQILVSLVLGPLTSAVGSANGVMYFSSLVSFLGC 720
Query: 721 LYSSLFVIYEIPPSDAADEEHRPLLLNV 748
LYSSLFVIYEIPPSDAADEEHRPLLLNV
Sbjct: 721 LYSSLFVIYEIPPSDAADEEHRPLLLNV 748
>gi|122937259 solute carrier family 45, member 4 [Homo sapiens]
Length = 798
Score = 358 bits (919), Expect = 1e-98
Identities = 234/674 (34%), Positives = 334/674 (49%), Gaps = 70/674 (10%)
Query: 113 LQMGLPDQLYSLVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAIGALLGLSLL 172
LQ GLP+Q YSL WF+SPILG + PL+G+ SDRCT +GRRRPFIL L +G L G++L
Sbjct: 27 LQKGLPEQYYSLTWFLSPILGLIFTPLIGSASDRCTLSWGRRRPFILALCVGVLFGVALF 86
Query: 173 LNGRDIGIALADVTGNHKWGLLLTVCGVVLMDFSADSADNPSHAYMMDVCSPADQDRGLN 232
LNG IG+AL DV G++LTV GVV++DFSAD+ + P AY++DV +QD LN
Sbjct: 87 LNGSAIGLALGDVPNRQPIGIVLTVLGVVVLDFSADATEGPIRAYLLDVVDSEEQDMALN 146
Query: 233 IHALLAGLGGGFGYVVGGIHWDKTGFGRALGGQLRVIYLFTAVTLSVTTVLTLVSIPERP 292
IHA AGLGG GYV+GG+ W +T G Q +V++ F A+ +V+ L L SI E
Sbjct: 147 IHAFSAGLGGAIGYVLGGLDWTQTFLGSWFRTQNQVLFFFAAIIFTVSVALHLFSIDEEQ 206
Query: 293 LRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLT---PKYG 349
P E+ A E G D H F + L P
Sbjct: 207 YSPQQERSA----------------EEPGALDGGEPHGVPAFPDEVQSEHELALDYPDVD 250
Query: 350 SFISRDSSLTGISEFASSFGTANIDSVLIDCFTGGHDSYLAIPGSVPRPPISVSFPRAPD 409
S+ S + + A + I+ SY A P S + PR
Sbjct: 251 IMRSKSDSALHVPDTALDLEPELLFLHDIEPSIFHDASYPATPRSTSQELAKTKLPRLAT 310
Query: 410 GF---YRQDRGLLEGR---------EGALTSGCDGDILRVGSLDTSKPRSSGILKRPQTL 457
++D LL+ G+ T G RV DT +S ++R +
Sbjct: 311 FLKEAAKEDETLLDNHLNEAKVPNGSGSPTKDALGGYTRV---DTKPSATSSSMRRRRHA 367
Query: 458 AIPDAA------GGGGPETSRRRNVTFSQQVANILLNGVKYESELTGSSERAEQ------ 505
A+ G G R R A +L+ + S+L +R Q
Sbjct: 368 FRRQASSTFSYYGKLGSHCYRYRRAN-----AVVLIKPSRSMSDLYDMQKRQRQHRHRNQ 422
Query: 506 -----------------PLSVGRLCSTICNMPKALRTLCVNHFLGWLSFEGMLLFYTDFM 548
+V L ++ MP+ L LC+ H L W S +FYTDFM
Sbjct: 423 SGATTSSGDTESEEGEGETTVRLLWLSMLKMPRELMRLCLCHLLTWFSVIAEAVFYTDFM 482
Query: 549 GEVVFQGDPKAPHTSEAYQKYNSGVTMGCWGMCIYAFSAAFYSAILEK-LEEF-LSVRTL 606
G+V+F+GDPKAP S A+Q YN+GV MGCWG+ IYA + A SA+L+K L+ + LSVR +
Sbjct: 483 GQVIFEGDPKAPSNSTAWQAYNAGVKMGCWGLVIYAATGAICSALLQKYLDNYDLSVRVI 542
Query: 607 YFIAYLAFGLGTGLATLSRNLYVVLSLCITYGILFSTLCTLPYSLLCDYYQSKKFAGSSA 666
Y + L F +GT + + N+YV + T GI+ ++ PY+LL Y+ K++ S
Sbjct: 543 YVLGTLGFSVGTAVMAMFPNVYVAMVTISTMGIVSMSISYCPYALLGQYHDIKQYIHHSP 602
Query: 667 DGTRRGMGVDISLLSCQYFLAQILVSLVLGPLTSAVGSANGVMYFSSLVSFLGCLYSSLF 726
++RG G+D ++LSCQ +++QILV+ LG + AVG+ + +S+ SFLG L ++
Sbjct: 603 GNSKRGFGIDCAILSCQVYISQILVASALGGVVDAVGTVRVIPMVASVGSFLGFLTATFL 662
Query: 727 VIYEIPPSDAADEE 740
VIY +A +E+
Sbjct: 663 VIYPNVSEEAKEEQ 676
>gi|61635915 membrane-associated transporter protein isoform a [Homo
sapiens]
Length = 530
Score = 217 bits (552), Expect = 4e-56
Identities = 111/238 (46%), Positives = 151/238 (63%), Gaps = 6/238 (2%)
Query: 80 PQRSFRELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQLYSLVWFISPILGFLLQPL 139
P+R L+ + +FG EF YA+E AYVTPVLL +GLP LYS+VWF+SPILGFLLQP+
Sbjct: 28 PKRPTSRLIMHSMAMFGREFCYAVEAAYVTPVLLSVGLPSSLYSIVWFLSPILGFLLQPV 87
Query: 140 LGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGIAL-ADVTGNHKWGLLLTVC 198
+G+ SD C SR+GRRRP+IL L + L+G++L LNG + AL A+ W + +T+
Sbjct: 88 VGSASDHCRSRWGRRRPYILTLGVMMLVGMALYLNGATVVAALIANPRRKLVWAISVTMI 147
Query: 199 GVVLMDFSADSADNPSHAYMMDVCSPADQDRGLNIHALLAGLGGGFGYVVGGIHWDKTGF 258
GVVL DF+AD D P AY+ DVCS D+++GL+ HAL G GG GY++G I W
Sbjct: 148 GVVLFDFAADFIDGPIKAYLFDVCSHQDKEKGLHYHALFTGFGGALGYLLGAIDWAHLEL 207
Query: 259 GRALGGQLRVIYLFTAVTLSVTTVLTLVSIPERPLRPPSEKRAAMKSPSLPLPPSPPV 316
GR LG + +V++ F+A+ L++ + L SI E PL A P P PP+
Sbjct: 208 GRLLGTEFQVMFFFSALVLTLCFTVHLCSISEAPL-----TEVAKGIPPQQTPQDPPL 260
Score = 183 bits (465), Expect = 4e-46
Identities = 89/235 (37%), Positives = 142/235 (60%), Gaps = 5/235 (2%)
Query: 500 SERAEQPLSVGRLCSTICNMPKALRTLCVNHFLGWLSFEGMLLFYTDFMGEVVFQGDPKA 559
+E+ + +++ L + NMP R LC++H +GW +F +LF+TDFMG++V++GDP +
Sbjct: 294 AEQTRRAMTLKSLLRALVNMPPHYRYLCISHLIGWTAFLSNMLFFTDFMGQIVYRGDPYS 353
Query: 560 PHTSEAYQKYNSGVTMGCWGMCIYAFSAAFYSAILEKLEEFLSVRTLYFIAYLAFGLGTG 619
H S + Y GV +GCWG CI + ++ YS + L ++ ++ LYF YL FGLGTG
Sbjct: 354 AHNSTEFLIYERGVEVGCWGFCINSVFSSLYSYFQKVLVSYIGLKGLYFTGYLLFGLGTG 413
Query: 620 LATLSRNLYVVLSLCITYGILFSTLCTLPYSLLCDYY-----QSKKFAGSSADGTRRGMG 674
L N+Y L LC +G++ STL T+P++L+ +Y+ + ++ G D + RG G
Sbjct: 414 FIGLFPNVYSTLVLCSLFGVMSSTLYTVPFNLITEYHREEEKERQQAPGGDPDNSVRGKG 473
Query: 675 VDISLLSCQYFLAQILVSLVLGPLTSAVGSANGVMYFSSLVSFLGCLYSSLFVIY 729
+D + L+C LAQILV LG L + G+ V+ +S V+ +GC + +LFV Y
Sbjct: 474 MDCATLTCMVQLAQILVGGGLGFLVNTAGTVVVVVITASAVALIGCCFVALFVRY 528
>gi|61636000 membrane-associated transporter protein isoform b [Homo
sapiens]
Length = 460
Score = 217 bits (552), Expect = 4e-56
Identities = 111/238 (46%), Positives = 151/238 (63%), Gaps = 6/238 (2%)
Query: 80 PQRSFRELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQLYSLVWFISPILGFLLQPL 139
P+R L+ + +FG EF YA+E AYVTPVLL +GLP LYS+VWF+SPILGFLLQP+
Sbjct: 28 PKRPTSRLIMHSMAMFGREFCYAVEAAYVTPVLLSVGLPSSLYSIVWFLSPILGFLLQPV 87
Query: 140 LGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGIAL-ADVTGNHKWGLLLTVC 198
+G+ SD C SR+GRRRP+IL L + L+G++L LNG + AL A+ W + +T+
Sbjct: 88 VGSASDHCRSRWGRRRPYILTLGVMMLVGMALYLNGATVVAALIANPRRKLVWAISVTMI 147
Query: 199 GVVLMDFSADSADNPSHAYMMDVCSPADQDRGLNIHALLAGLGGGFGYVVGGIHWDKTGF 258
GVVL DF+AD D P AY+ DVCS D+++GL+ HAL G GG GY++G I W
Sbjct: 148 GVVLFDFAADFIDGPIKAYLFDVCSHQDKEKGLHYHALFTGFGGALGYLLGAIDWAHLEL 207
Query: 259 GRALGGQLRVIYLFTAVTLSVTTVLTLVSIPERPLRPPSEKRAAMKSPSLPLPPSPPV 316
GR LG + +V++ F+A+ L++ + L SI E PL A P P PP+
Sbjct: 208 GRLLGTEFQVMFFFSALVLTLCFTVHLCSISEAPL-----TEVAKGIPPQQTPQDPPL 260
Score = 145 bits (366), Expect = 1e-34
Identities = 62/161 (38%), Positives = 103/161 (63%)
Query: 500 SERAEQPLSVGRLCSTICNMPKALRTLCVNHFLGWLSFEGMLLFYTDFMGEVVFQGDPKA 559
+E+ + +++ L + NMP R LC++H +GW +F +LF+TDFMG++V++GDP +
Sbjct: 294 AEQTRRAMTLKSLLRALVNMPPHYRYLCISHLIGWTAFLSNMLFFTDFMGQIVYRGDPYS 353
Query: 560 PHTSEAYQKYNSGVTMGCWGMCIYAFSAAFYSAILEKLEEFLSVRTLYFIAYLAFGLGTG 619
H S + Y GV +GCWG CI + ++ YS + L ++ ++ LYF YL FGLGTG
Sbjct: 354 AHNSTEFLIYERGVEVGCWGFCINSVFSSLYSYFQKVLVSYIGLKGLYFTGYLLFGLGTG 413
Query: 620 LATLSRNLYVVLSLCITYGILFSTLCTLPYSLLCDYYQSKK 660
L N+Y L LC +G++ STL T+P++L+ +Y++ ++
Sbjct: 414 FIGLFPNVYSTLVLCSLFGVMSSTLYTVPFNLITEYHREEE 454
>gi|14916437 prostein [Homo sapiens]
Length = 553
Score = 111 bits (277), Expect = 3e-24
Identities = 75/226 (33%), Positives = 113/226 (50%), Gaps = 8/226 (3%)
Query: 86 ELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQLYSLVWFISPILGFLLQPLLGAWSD 145
+LL + FG+E A YV P+LL++G+ ++ ++V I P+LG + PLLG+ SD
Sbjct: 17 QLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVCVPLLGSASD 76
Query: 146 RCTSRFGRRRPFILVLAIGALLGLSLLLN-GRDIGIALADVTGNHKWGLLLTVCGVVLMD 204
R+GRRRPFI L++G LL L L+ G G+ D L L + GV L+D
Sbjct: 77 HWRGRYGRRRPFIWALSLGILLSLFLIPRAGWLAGLLCPD---PRPLELALLILGVGLLD 133
Query: 205 FSADSADNPSHAYMMDVCSPADQDR-GLNIHALLAGLGGGFGYVVGGIHWDKTGFGRALG 263
F P A + D+ D R +++A + LGG GY++ I WD + LG
Sbjct: 134 FCGQVCFTPLEALLSDLFRDPDHCRQAYSVYAFMISLGGCLGYLLPAIDWDTSALAPYLG 193
Query: 264 GQLRVIY-LFTAVTLSVTTVLTLVSIPERPLRPPSEKRAAMKSPSL 308
Q ++ L T + L T V + + E P+E + +PSL
Sbjct: 194 TQEECLFGLLTLIFL--TCVAATLLVAEEAALGPTEPAEGLSAPSL 237
Score = 99.4 bits (246), Expect = 1e-20
Identities = 55/171 (32%), Positives = 87/171 (50%)
Query: 511 RLCSTICNMPKALRTLCVNHFLGWLSFEGMLLFYTDFMGEVVFQGDPKAPHTSEAYQKYN 570
RL C MP+ LR L V W++ LFYTDF+GE ++QG P+A +EA + Y+
Sbjct: 259 RLHQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGVPRAEPGTEARRHYD 318
Query: 571 SGVTMGCWGMCIYAFSAAFYSAILEKLEEFLSVRTLYFIAYLAFGLGTGLATLSRNLYVV 630
GV MG G+ + + +S ++++L + R +Y + AF + G LS ++ VV
Sbjct: 319 EGVRMGSLGLFLQCAISLVFSLVMDRLVQRFGTRAVYLASVAAFPVAAGATCLSHSVAVV 378
Query: 631 LSLCITYGILFSTLCTLPYSLLCDYYQSKKFAGSSADGTRRGMGVDISLLS 681
+ G FS L LPY+L Y++ K+ G G + SL++
Sbjct: 379 TASAALTGFTFSALQILPYTLASLYHREKQVFLPKYRGDTGGASSEDSLMT 429
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 43.5 bits (101), Expect = 7e-04
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 282 VLTLVSIPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNF--SSPIS 339
VL ++ P P PP +A++ P P PP PP LP GP P N P
Sbjct: 307 VLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPP 366
Query: 340 PPSPLTPKYGSFISRDSS----LTGIS 362
PP+P P G F++ S LTG++
Sbjct: 367 PPAPPLPASGFFLASMSEDNRPLTGLA 393
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 43.5 bits (101), Expect = 7e-04
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 282 VLTLVSIPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNF--SSPIS 339
VL ++ P P PP +A++ P P PP PP LP GP P N P
Sbjct: 307 VLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPP 366
Query: 340 PPSPLTPKYGSFISRDSS----LTGIS 362
PP+P P G F++ S LTG++
Sbjct: 367 PPAPPLPASGFFLASMSEDNRPLTGLA 393
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.3 bits (90), Expect = 0.013
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 295 PPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSS---------PISPPSPLT 345
PPS+ ++ +P L +PPSPP P P + P ++ P +PP+ T
Sbjct: 466 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 525
Query: 346 PKYGSFISRDSSLTGISEFASS 367
P + S +S G + F+ S
Sbjct: 526 PPLQALPSPPASFPGQAPFSPS 547
Score = 36.6 bits (83), Expect = 0.087
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 284 TLVSIPERPLRPPSEKRAAMKSPSLPLP----PSPPVLPEEGPGDSLPSHTA-TNFSSPI 338
+L ++P P PPS+ ++ SP+L PSPP+ P P P A +P
Sbjct: 350 SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP 409
Query: 339 SPPS--PLTP 346
SPP+ PL+P
Sbjct: 410 SPPASPPLSP 419
Score = 35.4 bits (80), Expect = 0.19
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 285 LVSIPERPLR-PPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATN---------- 333
L S P PL PP + A+ P L PPSPP P P + PS A N
Sbjct: 381 LPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSP-LATPSPQAPNALAVHLLQAP 439
Query: 334 FSSPISPP--SPLTP 346
FS P SPP +P +P
Sbjct: 440 FSPPPSPPVQAPFSP 454
Score = 34.7 bits (78), Expect = 0.33
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
Query: 287 SIPERPLR-PPSEKRAAMKSPSLPLPPSPPVL---------PEEGPGDSLPSHTATNFSS 336
S+P PL PP + + +P L +PPSPP P GP S+ T +
Sbjct: 549 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALA 608
Query: 337 PISPPSPLTPKYGSFISRDSSLTGISEFASS 367
P PP P + D L G S A+S
Sbjct: 609 PGPPPPPSRSPSSTLSGPD--LAGHSSSATS 637
Score = 32.7 bits (73), Expect = 1.3
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 285 LVSIPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPL 344
L + P + +PP + A+ +P L PSPP PG + S +A+ SP++ P P
Sbjct: 505 LAAPPLQLAKPPPQAPPALATPPLQALPSPPA---SFPGQAPFSPSASLPMSPLATPPPQ 561
Query: 345 TP 346
P
Sbjct: 562 AP 563
Score = 32.0 bits (71), Expect = 2.2
Identities = 24/55 (43%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 292 PLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHT--ATNFSSPISPPSPL 344
PL PPS PSL PSPP P SL S T AT+ P P SPL
Sbjct: 339 PLAPPSPSAP----PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPL 389
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.3 bits (90), Expect = 0.013
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 295 PPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSS---------PISPPSPLT 345
PPS+ ++ +P L +PPSPP P P + P ++ P +PP+ T
Sbjct: 427 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 486
Query: 346 PKYGSFISRDSSLTGISEFASS 367
P + S +S G + F+ S
Sbjct: 487 PPLQALPSPPASFPGQAPFSPS 508
Score = 36.6 bits (83), Expect = 0.087
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 284 TLVSIPERPLRPPSEKRAAMKSPSLPLP----PSPPVLPEEGPGDSLPSHTA-TNFSSPI 338
+L ++P P PPS+ ++ SP+L PSPP+ P P P A +P
Sbjct: 311 SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP 370
Query: 339 SPPS--PLTP 346
SPP+ PL+P
Sbjct: 371 SPPASPPLSP 380
Score = 35.4 bits (80), Expect = 0.19
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 285 LVSIPERPLR-PPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATN---------- 333
L S P PL PP + A+ P L PPSPP P P + PS A N
Sbjct: 342 LPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSP-LATPSPQAPNALAVHLLQAP 400
Query: 334 FSSPISPP--SPLTP 346
FS P SPP +P +P
Sbjct: 401 FSPPPSPPVQAPFSP 415
Score = 34.7 bits (78), Expect = 0.33
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
Query: 287 SIPERPLR-PPSEKRAAMKSPSLPLPPSPPVL---------PEEGPGDSLPSHTATNFSS 336
S+P PL PP + + +P L +PPSPP P GP S+ T +
Sbjct: 510 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALA 569
Query: 337 PISPPSPLTPKYGSFISRDSSLTGISEFASS 367
P PP P + D L G S A+S
Sbjct: 570 PGPPPPPSRSPSSTLSGPD--LAGHSSSATS 598
Score = 32.7 bits (73), Expect = 1.3
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 285 LVSIPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPL 344
L + P + +PP + A+ +P L PSPP PG + S +A+ SP++ P P
Sbjct: 466 LAAPPLQLAKPPPQAPPALATPPLQALPSPPA---SFPGQAPFSPSASLPMSPLATPPPQ 522
Query: 345 TP 346
P
Sbjct: 523 AP 524
Score = 30.0 bits (66), Expect = 8.2
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 292 PLRPPSEKRAAMKS--PSLPLPPSPPVLPEEGPGDSLPSHT--ATNFSSPISPPSPL 344
PL PS S PSL PSPP P SL S T AT+ P P SPL
Sbjct: 294 PLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPL 350
>gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo
sapiens]
Length = 468
Score = 39.3 bits (90), Expect = 0.013
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 289 PERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPKY 348
P RP P +E + P+LP+P +P P P P + P+ PP P P Y
Sbjct: 198 PHRPRLPSAESLSRRPLPALPVPEAPSPSPVPSPA---PGRKGSIQDRPLPPPPPRLPGY 254
Query: 349 G 349
G
Sbjct: 255 G 255
>gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo
sapiens]
Length = 561
Score = 39.3 bits (90), Expect = 0.013
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 289 PERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPKY 348
P RP P +E + P+LP+P +P P P P + P+ PP P P Y
Sbjct: 291 PHRPRLPSAESLSRRPLPALPVPEAPSPSPVPSPA---PGRKGSIQDRPLPPPPPRLPGY 347
Query: 349 G 349
G
Sbjct: 348 G 348
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 37.7 bits (86), Expect = 0.039
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 276 TLSVTTVLTLVSIPE-RPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNF 334
T +V V+T + P P PP++K+ A P+ +PPSPP P P +LP +
Sbjct: 791 TKTVAPVVTQAAPPTPTPPVPPAKKQPAF--PASYIPPSPPTPPVPVPPPTLPKQQSFCA 848
Query: 335 SSPISPPSPL 344
P SP SP+
Sbjct: 849 KPPPSPLSPV 858
Score = 30.4 bits (67), Expect = 6.3
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 287 SIPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGD-------SLPSHTATNFSSPI- 338
S P PL+ + +P P PP PP +P P ++P+ T+T +P+
Sbjct: 741 SAPPPPLKIHQVQHITQVAP--PTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVV 798
Query: 339 ---SPPSPLTP 346
+PP+P P
Sbjct: 799 TQAAPPTPTPP 809
Score = 30.4 bits (67), Expect = 6.3
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 286 VSIPERPLRPPSEKRAAMKSPSLPLP-PSPPVLPEEGP---GDSLPSHTATNFSSPISPP 341
V P+ P PP P P+P P PP P P P + SSP
Sbjct: 911 VPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKK 970
Query: 342 SPLTPKYGSFISRDS 356
P TP+ S I S
Sbjct: 971 PPPTPQRNSSIKSSS 985
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 37.0 bits (84), Expect = 0.067
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 295 PPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSP--ISPPSP 343
PPS+ ++ +P L +PPSPP P P + P ++P PPSP
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSP 741
Score = 35.8 bits (81), Expect = 0.15
Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 291 RPLRPPSEKRAAMKSPSLPLPPSPPV---LPEEGPGDSLPSHTATNFSSPISPPSPLTP 346
RP+ PP AA P+ LPPSPP+ LP P S P T S P +PPS P
Sbjct: 315 RPVPPPDN--AATPLPAT-LPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPP 370
Score = 35.0 bits (79), Expect = 0.25
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 287 SIPERPL-RPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLT 345
S+P PL +PP + A+ +P L PSPP PG + S +A+ SP++ P P
Sbjct: 775 SLPMSPLAKPPPQAPPALATPPLQALPSPPA---SFPGQAPFSPSASLPMSPLATPPPQA 831
Query: 346 P 346
P
Sbjct: 832 P 832
Score = 34.7 bits (78), Expect = 0.33
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 284 TLVSIPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPI--SPP 341
+L ++P P PPS+ +M +P + PPS +P P + +SP +PP
Sbjct: 353 SLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIP--------PIQVPHSLTSPSLQAPP 404
Query: 342 SPL 344
SPL
Sbjct: 405 SPL 407
Score = 34.7 bits (78), Expect = 0.33
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
Query: 287 SIPERPLR-PPSEKRAAMKSPSLPLPPSPPVL---------PEEGPGDSLPSHTATNFSS 336
S+P PL PP + + +P L +PPSPP P GP S+ T +
Sbjct: 818 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALA 877
Query: 337 PISPPSPLTPKYGSFISRDSSLTGISEFASS 367
P PP P + D L G S A+S
Sbjct: 878 PGPPPPPSRSPSSTLSGPD--LAGHSSSATS 906
Score = 33.9 bits (76), Expect = 0.57
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 295 PPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSP--ISPPSP 343
PP + + +P L +PPSPP P P + P ++P PPSP
Sbjct: 722 PPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSP 772
Score = 33.5 bits (75), Expect = 0.74
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 289 PERP---LRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTA-TNFSSPISPPS-- 342
PE P PP + A+ SP L PSPP+ P P P A +P SPP+
Sbjct: 581 PETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASP 640
Query: 343 PLTP 346
PL+P
Sbjct: 641 PLSP 644
Score = 32.0 bits (71), Expect = 2.2
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 12/74 (16%)
Query: 285 LVSIPERPLR-PPSEKRAAMKSPSLPLPPSPP----VLPEEGPGDSLPSHTATN-----F 334
L S P PL PP + + P L PPSPP + P P P+ A + F
Sbjct: 606 LPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPF 665
Query: 335 SSPISPP--SPLTP 346
S P SPP +P +P
Sbjct: 666 SPPPSPPVQAPFSP 679
Score = 32.0 bits (71), Expect = 2.2
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 289 PERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPKY 348
P P PP A PL +PP+ P SLP P +PP+ TP
Sbjct: 739 PSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAK-PPPQAPPALATPPL 797
Query: 349 GSFISRDSSLTGISEFASS 367
+ S +S G + F+ S
Sbjct: 798 QALPSPPASFPGQAPFSPS 816
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 37.0 bits (84), Expect = 0.067
Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 27/213 (12%)
Query: 313 SPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPKYGSFISR-DSSLTGISEFASS--FG 369
SPP P + PG LP SP++PP+PL S+ ++ +S ASS FG
Sbjct: 271 SPPQKPSQSPGHGLP--------SPLTPPNPLQLVNNPLASQAAAAAAAMSSIASSQAFG 322
Query: 370 TA--NIDSVLIDCFTGGHDSYLAIPGSVPRPPISVSFPRAPDGFYRQ--DRGLLEGREGA 425
A ++ V T + +P P S G Q LL +G
Sbjct: 323 NALSSLQGVTGQLVTNAQGQIIGTIPLMPNPGPSSQAASGTQGLQVQPITPQLLTNAQGQ 382
Query: 426 LTSGCDGD----ILRVGSLDTSKPRSSGILKRPQTLAIPDAAGGGGPETSRRRNVTFSQQ 481
+ + G+ ++ + S + L +P ++ AA G + SQ
Sbjct: 383 IIATVIGNQILPVINTQGITLSPIKPGQQLHQPSQTSVGQAASQGNLLHLAHSQASMSQS 442
Query: 482 VANILLNGVKYESELTGSSERAEQPLSVGRLCS 514
++ + SS + LSVG+L S
Sbjct: 443 PVR--------QASSSSSSSSSSSALSVGQLVS 467
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 36.6 bits (83), Expect = 0.087
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 287 SIPERPLRPPSEKRAAMKSPSLPLPP--SPPVL---PEEGPGDSLPSHTATNF---SSPI 338
++P +P RPP+ A ++P LP PP PP + EE P L S + +
Sbjct: 879 ALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKV 938
Query: 339 SPPSPLTP 346
PP+PL P
Sbjct: 939 QPPTPLLP 946
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 36.6 bits (83), Expect = 0.087
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 17/67 (25%)
Query: 290 ERPLRPP------------SEKRAAMKSPSLPLPPSPPVLPEEGPGDS-LPSHTATNFSS 336
ERP+RP S+ +A P +P P P LP GPG LP+HT N
Sbjct: 525 ERPVRPALQPPGPVGILHFSQPGSATTRPFIP--PRQPFLP--GPGQPFLPTHTQPNLQG 580
Query: 337 PISPPSP 343
P+ PP P
Sbjct: 581 PLHPPLP 587
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 36.6 bits (83), Expect = 0.087
Identities = 39/127 (30%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 289 PERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSH-TATNFSSPISPPSPLTPK 347
P RP PP + + SP P PP PP G +LP ++ +P PP PL P
Sbjct: 570 PARPTMPPPQVSGSRSSP--PAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPP-PLPPT 626
Query: 348 YGSFISRDSSLTGISEFASSFGTA--------NIDSVLIDCFTGGHDSYLAIPGSVPRPP 399
R S + S +S G A N V + T + AI G VP PP
Sbjct: 627 PPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVDLGAATAEGGAPEAISG-VPTPP 685
Query: 400 ISVSFPR 406
PR
Sbjct: 686 AIPPQPR 692
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 36.2 bits (82), Expect = 0.11
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 287 SIPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPI--SPPSPL 344
S P RP P R+ P P PPS P LP PG + FS PI S P P+
Sbjct: 441 SSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKPG---VGDVSRPFSPPIHSSSPPPI 497
Query: 345 TPKYGSFISRDSSLTGIS 362
P ++R S + IS
Sbjct: 498 AP-----LARAESTSSIS 510
Score = 33.1 bits (74), Expect = 0.97
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 297 SEKRAAMKSPSLPLPPSPP----VLPEEGPGDSLPSHTATNFSSPISPPSPLTP 346
S K + + P PP PP V+ GPG T + SSP P +PL P
Sbjct: 399 SPKDFGLGQRATPPPPPPPTYRTVVSSPGPGSGPGPGTTSGASSPARPATPLVP 452
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 35.8 bits (81), Expect = 0.15
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 292 PLRPPSEKRAAMKSP--SLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTP 346
P PPS A+ P + PP PP LP P P + P++PP P P
Sbjct: 323 PPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPP 379
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 35.8 bits (81), Expect = 0.15
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 289 PERPLRPPSEKRAA--MKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTP 346
P P PP + M PS+P PP PPV+P++ P ++ NF PP P
Sbjct: 130 PPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNF-----PP----P 180
Query: 347 KYGSFISRDSSLTGISEFASS 367
+ SF + SS + +SS
Sbjct: 181 SFNSFQNNPSSFLPSANNSSS 201
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 35.8 bits (81), Expect = 0.15
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 289 PERPLRPPSEKRAA--MKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTP 346
P P PP + M PS+P PP PPV+P++ P ++ NF PP P
Sbjct: 130 PPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNF-----PP----P 180
Query: 347 KYGSFISRDSSLTGISEFASS 367
+ SF + SS + +SS
Sbjct: 181 SFNSFQNNPSSFLPSANNSSS 201
>gi|56676337 transmembrane protein 28 [Homo sapiens]
Length = 472
Score = 35.8 bits (81), Expect = 0.15
Identities = 51/190 (26%), Positives = 69/190 (36%), Gaps = 39/190 (20%)
Query: 293 LRPP----SEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPKY 348
+RPP E++ LPLPP PP P PG P ++ ++P + P+
Sbjct: 78 MRPPWGAGRERQPVPPRAVLPLPPPPPGEPSAPPGTCGPRYSNLTKAAPAAGSRPVCGGV 137
Query: 349 GSFISRDSSLTGISEFASSFGTANIDSVLIDCFTGGHDSYLAIPGSVPRPPISVSFPRAP 408
D++ T + F P RPP S+S RAP
Sbjct: 138 PEPTGLDAACTKLQSLQRLFEPTT-------------------PAPPLRPPDSLS--RAP 176
Query: 409 DGFYRQDRGLLEGREGALT-SGCD----GDIL----RVGSLDTSKPRSSGILKRPQTLAI 459
F + LL+G T S CD D+L R SLD S G L LA+
Sbjct: 177 AEFPSAKKNLLKGHFRNFTLSFCDTYTVWDLLLGMDRPDSLDCSLDTLMGDL-----LAV 231
Query: 460 PDAAGGGGPE 469
+ G G E
Sbjct: 232 VASPGSGAWE 241
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 35.4 bits (80), Expect = 0.19
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 273 TAVTLSVTTVLTLVSIPERPLRPPSEK-RAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTA 331
TA LS T TL P+ L PP+ + K+P++P P P P S P+ T
Sbjct: 1530 TATLLSKKTPATLA--PKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTP 1587
Query: 332 TNFSSPISPPSPLTP 346
+ + SP L P
Sbjct: 1588 STYKGAPSPKELLIP 1602
Score = 32.3 bits (72), Expect = 1.6
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 20/81 (24%)
Query: 289 PERPLRPPSEKRAAMKSPSLPLPPSPPVL----PEEGPGDSLPSHTATNFSSPISP---- 340
P+ L PP A+ SPS P+PP + PE+GP P T T S P++P
Sbjct: 1596 PKELLIPP-----AVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPT--SPPVTPSSLK 1648
Query: 341 -----PSPLTPKYGSFISRDS 356
P+ +T K G+ + + S
Sbjct: 1649 DSPTSPASVTCKMGATVPQAS 1669
Score = 31.2 bits (69), Expect = 3.7
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 289 PERPLRPPSEKRAAM-----KSPSLPLPPSPPVLPEEGPGD--SLPSHTATNFSSPISPP 341
P P PP+ K+ A K+P+ P P P LP P +P+ T ++ PI+P
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPA-TPSSRRDPIAPT 1530
Query: 342 SPLTPK 347
+ L K
Sbjct: 1531 ATLLSK 1536
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 35.4 bits (80), Expect = 0.19
Identities = 20/62 (32%), Positives = 23/62 (37%)
Query: 285 LVSIPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPL 344
L +P PPS A P P PP P LP + P P P+ PP P
Sbjct: 548 LPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPP 607
Query: 345 TP 346
P
Sbjct: 608 PP 609
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 35.0 bits (79), Expect = 0.25
Identities = 54/195 (27%), Positives = 64/195 (32%), Gaps = 32/195 (16%)
Query: 286 VSIPERPLRPPSEKRAAMKSP----------SLPLPPSPPVLPEEGPGDSLPSHTATNFS 335
+ +PE L PP R+ SP SL L P PE P P S
Sbjct: 952 LGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGAS 1011
Query: 336 SPISPPSPLTPKYGSFISRDSSLTGISEFASSFGTANIDSVLIDCFTGGHDSYLAIPGSV 395
SP TP+ G+S S G +G H S L P S
Sbjct: 1012 GGASPVG-FTPR-----------GGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASS 1059
Query: 396 PRP---PISVSFPRAPDGFYRQDRGLLEGREGALTSGCDGDILRVGSLDTSKPRSSGILK 452
P P P P G QD L+ + AL DG +L + P SSG
Sbjct: 1060 PPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQ--DG----AQTLRRASPHSSGESM 1113
Query: 453 RPQTLAIPDAAGGGG 467
L P A GG G
Sbjct: 1114 AAFPL-FPRAGGGSG 1127
>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
Length = 733
Score = 35.0 bits (79), Expect = 0.25
Identities = 47/157 (29%), Positives = 64/157 (40%), Gaps = 19/157 (12%)
Query: 288 IPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPK 347
+P RP PPS AA K P L LP PP+ ++ + PS S P P P
Sbjct: 264 LPPRPDSPPSAGPAAYKEPPLALPSLPPLPFQKLEEAAPPSDPFRGGSGSPGPEPPGRPD 323
Query: 348 YGSFISR-DSSLTGISEFASSFGTANIDSVLIDCFTGGHDSYLAIPGSVPRPPISVS-FP 405
S + R G+ + G S C G D+ ++ PG PP+ ++ P
Sbjct: 324 GPSLLYRWMKHEPGLGSYGDELGRER-GSPSERCEERGGDAAVS-PGG---PPLGLAPPP 378
Query: 406 RAPDGFYRQDRGLLEGREGALTSGCDGDILRVGSLDT 442
R P G L+G GA G DGD + S +T
Sbjct: 379 RYP--------GSLDG-PGA---GGDGDDYKSSSEET 403
>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
Length = 714
Score = 35.0 bits (79), Expect = 0.25
Identities = 47/157 (29%), Positives = 64/157 (40%), Gaps = 19/157 (12%)
Query: 288 IPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPK 347
+P RP PPS AA K P L LP PP+ ++ + PS S P P P
Sbjct: 245 LPPRPDSPPSAGPAAYKEPPLALPSLPPLPFQKLEEAAPPSDPFRGGSGSPGPEPPGRPD 304
Query: 348 YGSFISR-DSSLTGISEFASSFGTANIDSVLIDCFTGGHDSYLAIPGSVPRPPISVS-FP 405
S + R G+ + G S C G D+ ++ PG PP+ ++ P
Sbjct: 305 GPSLLYRWMKHEPGLGSYGDELGRER-GSPSERCEERGGDAAVS-PGG---PPLGLAPPP 359
Query: 406 RAPDGFYRQDRGLLEGREGALTSGCDGDILRVGSLDT 442
R P G L+G GA G DGD + S +T
Sbjct: 360 RYP--------GSLDG-PGA---GGDGDDYKSSSEET 384
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 34.7 bits (78), Expect = 0.33
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 281 TVLTLVSIPERPLRP-PSEKRAAMKSPSLPLP-----PSPPVLPEEGPGDSLPSHTATNF 334
T T+ S P P P P+ ++A +P P P P+P E P + T
Sbjct: 233 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK 292
Query: 335 SSPISP--PSPLTPK 347
S+P +P P+P TPK
Sbjct: 293 SAPTTPKEPAPTTPK 307
Score = 34.3 bits (77), Expect = 0.43
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 289 PERPLRPPSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSLPSHTATNFSSPISP---- 340
PE P P + K AA +P P P +P P P+E P + P TA +P
Sbjct: 527 PEEPA-PTTPKAAAPNTPKEPAPTTPKEPAPTTPKE-PAPTTPKETAPTTPKGTAPTTLK 584
Query: 341 -PSPLTPK 347
P+P TPK
Sbjct: 585 EPAPTTPK 592
Score = 33.1 bits (74), Expect = 0.97
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 280 TTVLTLVSIPERPLRPPSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSLPSH---TAT 332
TT + + P+ P P + K A +P P P +P P P+E P + P T T
Sbjct: 406 TTTKSAPTTPKEP-SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE-PAPTTPKEPAPTTT 463
Query: 333 NFSSPISP--PSPLTPK 347
+P +P P+P TPK
Sbjct: 464 KKPAPTTPKEPAPTTPK 480
Score = 30.4 bits (67), Expect = 6.3
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 289 PERPLRP-PSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSLPSHTATNFSSPISPPSP 343
P P P P+ K A +P P P +P P P+E P + P A + PSP
Sbjct: 327 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKE-PAPTTPKEPAPTTTKE---PSP 382
Query: 344 LTPK 347
TPK
Sbjct: 383 TTPK 386
Score = 30.0 bits (66), Expect = 8.2
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 291 RPLRPPSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSL--PSHTATNFSSPISP--PS 342
+ L P + ++ A +P P P +P P PEE + P+ T ++P +P P+
Sbjct: 488 KKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA 547
Query: 343 PLTPK 347
P TPK
Sbjct: 548 PTTPK 552
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 34.7 bits (78), Expect = 0.33
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 281 TVLTLVSIPERPLRP-PSEKRAAMKSPSLPLP-----PSPPVLPEEGPGDSLPSHTATNF 334
T T+ S P P P P+ ++A +P P P P+P E P + T
Sbjct: 274 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK 333
Query: 335 SSPISP--PSPLTPK 347
S+P +P P+P TPK
Sbjct: 334 SAPTTPKEPAPTTPK 348
Score = 34.3 bits (77), Expect = 0.43
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 289 PERPLRPPSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSLPSHTATNFSSPISP---- 340
PE P P + K AA +P P P +P P P+E P + P TA +P
Sbjct: 568 PEEPA-PTTPKAAAPNTPKEPAPTTPKEPAPTTPKE-PAPTTPKETAPTTPKGTAPTTLK 625
Query: 341 -PSPLTPK 347
P+P TPK
Sbjct: 626 EPAPTTPK 633
Score = 33.1 bits (74), Expect = 0.97
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 280 TTVLTLVSIPERPLRPPSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSLPSH---TAT 332
TT + + P+ P P + K A +P P P +P P P+E P + P T T
Sbjct: 447 TTTKSAPTTPKEP-SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE-PAPTTPKEPAPTTT 504
Query: 333 NFSSPISP--PSPLTPK 347
+P +P P+P TPK
Sbjct: 505 KKPAPTTPKEPAPTTPK 521
Score = 30.4 bits (67), Expect = 6.3
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 289 PERPLRP-PSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSLPSHTATNFSSPISPPSP 343
P P P P+ K A +P P P +P P P+E P + P A + PSP
Sbjct: 368 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKE-PAPTTPKEPAPTTTKE---PSP 423
Query: 344 LTPK 347
TPK
Sbjct: 424 TTPK 427
Score = 30.0 bits (66), Expect = 8.2
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 291 RPLRPPSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSL--PSHTATNFSSPISP--PS 342
+ L P + ++ A +P P P +P P PEE + P+ T ++P +P P+
Sbjct: 529 KKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA 588
Query: 343 PLTPK 347
P TPK
Sbjct: 589 PTTPK 593
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 34.7 bits (78), Expect = 0.33
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 281 TVLTLVSIPERPLRP-PSEKRAAMKSPSLPLP-----PSPPVLPEEGPGDSLPSHTATNF 334
T T+ S P P P P+ ++A +P P P P+P E P + T
Sbjct: 326 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK 385
Query: 335 SSPISP--PSPLTPK 347
S+P +P P+P TPK
Sbjct: 386 SAPTTPKEPAPTTPK 400
Score = 34.3 bits (77), Expect = 0.43
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 289 PERPLRPPSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSLPSHTATNFSSPISP---- 340
PE P P + K AA +P P P +P P P+E P + P TA +P
Sbjct: 620 PEEPA-PTTPKAAAPNTPKEPAPTTPKEPAPTTPKE-PAPTTPKETAPTTPKGTAPTTLK 677
Query: 341 -PSPLTPK 347
P+P TPK
Sbjct: 678 EPAPTTPK 685
Score = 33.1 bits (74), Expect = 0.97
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 280 TTVLTLVSIPERPLRPPSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSLPSH---TAT 332
TT + + P+ P P + K A +P P P +P P P+E P + P T T
Sbjct: 499 TTTKSAPTTPKEP-SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE-PAPTTPKEPAPTTT 556
Query: 333 NFSSPISP--PSPLTPK 347
+P +P P+P TPK
Sbjct: 557 KKPAPTTPKEPAPTTPK 573
Score = 30.4 bits (67), Expect = 6.3
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 289 PERPLRP-PSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSLPSHTATNFSSPISPPSP 343
P P P P+ K A +P P P +P P P+E P + P A + PSP
Sbjct: 420 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKE-PAPTTPKEPAPTTTKE---PSP 475
Query: 344 LTPK 347
TPK
Sbjct: 476 TTPK 479
Score = 30.0 bits (66), Expect = 8.2
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 291 RPLRPPSEKRAAMKSPSLPLPPSP----PVLPEEGPGDSL--PSHTATNFSSPISP--PS 342
+ L P + ++ A +P P P +P P PEE + P+ T ++P +P P+
Sbjct: 581 KKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA 640
Query: 343 PLTPK 347
P TPK
Sbjct: 641 PTTPK 645
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,275,770
Number of Sequences: 37866
Number of extensions: 1661191
Number of successful extensions: 13538
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 11669
Number of HSP's gapped (non-prelim): 1937
length of query: 748
length of database: 18,247,518
effective HSP length: 110
effective length of query: 638
effective length of database: 14,082,258
effective search space: 8984480604
effective search space used: 8984480604
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.