Guide to the Human Genome
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Name: KIAA1147 Sequence: fasta or formatted (455aa) NCBI GI: 122937185
Description:

hypothetical protein LOC57189

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         29           2
 C cysteine            2.6         12           4
 D aspartate           4.6         21           1
 E glutamate           8.8         40           2
 F phenylalanine       5.1         23           2
 G glycine             7.5         34           5
 H histidine           2.6         12           2
 I isoleucine          4.2         19           1
 K lysine              3.7         17           2
 L leucine            10.3         47           2
 M methionine          2.9         13           1
 N asparagine          2.9         13           2
 P proline             7.7         35           3
 Q glutamine           4.6         21           1
 R arginine            5.7         26           3
 S serine              5.5         25           2
 T threonine           2.2         10           2
 V valine              7.5         34           2
 W tryptophan          1.1          5           1
 Y tyrosine            4.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57189 
AVL9                  0.022   AVL9 homolog (S. cerevisiase) 
SOCS7                 0.016   suppressor of cytokine signaling 7 
FAM45A                0.016   hypothetical protein LOC404636 
GRIN2D                0.015   N-methyl-D-aspartate receptor subunit 2D precursor ...
MEX3A                 0.014   MEX3A protein 
LOC100288548          0.013   PREDICTED: hypothetical protein XP_002342129 
KBTBD11               0.012   kelch repeat and BTB (POZ) domain containing 11 [Homo...
DMWD                  0.011   dystrophia myotonica-containing WD repeat motif prot...
LOC338758             0.011   PREDICTED: hypothetical protein 
LOC338758             0.011   PREDICTED: hypothetical protein 
LOC338758             0.011   PREDICTED: hypothetical protein 
LOC389333             0.011   hypothetical protein LOC389333 
TAF4                  0.010   TBP-associated factor 4 
DONSON                0.010   downstream neighbor of SON 
ANGPTL3               0.009   angiopoietin-like 3 precursor 
SLC25A28              0.009   solute carrier family 25, member 28 
FAM101B               0.009   hypothetical protein LOC359845 
LOC100128943          0.009   PREDICTED: similar to hCG2038853 
LOC100128943          0.009   PREDICTED: similar to hCG2038853 
LOC100128943          0.009   PREDICTED: similar to hCG2038853 
SYN1                  0.009   synapsin I isoform Ia 
SYN1                  0.009   synapsin I isoform Ib 
FOXL2                 0.009   forkhead box L2 
LOC100293486          0.009   PREDICTED: similar to hCG2041452 
LOC100291379          0.009   PREDICTED: hypothetical protein XP_002346556 
LOC100288960          0.009   PREDICTED: hypothetical protein XP_002342392 
DSCAML1               0.009   Down syndrome cell adhesion molecule like 1 
PALM3                 0.008   hypothetical protein LOC342979 
FOXF1                 0.008   forkhead box F1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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