Guide to the Human Genome
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Name: SLC25A28 Sequence: fasta or formatted (364aa) NCBI GI: 149274643
Description:

solute carrier family 25, member 28

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.2         48           4
 C cysteine            2.2          8           1
 D aspartate           2.7         10           1
 E glutamate           4.7         17           2
 F phenylalanine       2.7         10           2
 G glycine            10.7         39           3
 H histidine           3.3         12           1
 I isoleucine          3.6         13           2
 K lysine              2.5          9           2
 L leucine             6.9         25           2
 M methionine          3.0         11           1
 N asparagine          3.3         12           1
 P proline             5.8         21           2
 Q glutamine           4.4         16           1
 R arginine            6.6         24           2
 S serine              4.4         16           2
 T threonine           6.6         24           2
 V valine              7.4         27           2
 W tryptophan          1.6          6           1
 Y tyrosine            4.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25, member 28 
SLC25A37              0.592   solute carrier family 25, member 37 
SLC25A33              0.110   mitochondrial carrier protein MGC4399 
SLC25A39              0.105   solute carrier family 25, member 39 isoform b 
SLC25A40              0.103   mitochondrial carrier family protein 
SLC25A13              0.101   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.101   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A38              0.098   solute carrier family 25, member 38 
SLC25A39              0.098   solute carrier family 25, member 39 isoform a [Homo...
SLC25A36              0.094   solute carrier family 25, member 36 isoform a [Homo...
SLC25A36              0.092   solute carrier family 25, member 36 isoform b [Homo...
LOC100292202          0.092   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.092   PREDICTED: similar to solute carrier family 25, mem...
SLC25A19              0.092   solute carrier family 25, member 19 
SLC25A19              0.092   solute carrier family 25, member 19 
SLC25A19              0.092   solute carrier family 25, member 19 
SLC25A25              0.092   solute carrier family 25, member 25 isoform c 
SLC25A25              0.092   solute carrier family 25, member 25 isoform a 
SLC25A25              0.092   solute carrier family 25, member 25 isoform d 
SLC25A25              0.092   solute carrier family 25, member 25 isoform b 
SLC25A12              0.091   solute carrier family 25, member 12 
SLC25A24              0.088   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.088   solute carrier family 25 member 24 isoform 2 
SLC25A45              0.088   solute carrier family 25, member 45 isoform a [Homo...
SLC25A23              0.087   solute carrier family 25, member 23 
SLC25A18              0.084   solute carrier 
SLC25A41              0.084   solute carrier family 25, member 41 
SLC25A32              0.081   solute carrier family 25, member 32 
SLC25A26              0.081   solute carrier family 25, member 26 
SLC25A20              0.079   carnitine/acylcarnitine translocase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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