Guide to the Human Genome
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Name: EIF2C2 Sequence: fasta or formatted (859aa) NCBI GI: 29171734
Description:

eukaryotic translation initiation factor 2C, 2

Referenced in:

RNA Metabolism
RNases and RNA Stability
Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         54           2
 C cysteine            2.6         22           1
 D aspartate           4.5         39           2
 E glutamate           4.8         41           2
 F phenylalanine       4.5         39           2
 G glycine             6.2         53           3
 H histidine           3.7         32           2
 I isoleucine          5.6         48           2
 K lysine              6.2         53           2
 L leucine             7.1         61           2
 M methionine          2.4         21           2
 N asparagine          2.6         22           2
 P proline             6.8         58           4
 Q glutamine           6.6         57           2
 R arginine            6.6         57           2
 S serine              5.1         44           2
 T threonine           6.3         54           2
 V valine              8.1         70           3
 W tryptophan          0.7          6           1
 Y tyrosine            3.3         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 2C, 2 [Homo... 
EIF2C1                0.834   eukaryotic translation initiation factor 2C, 1 
EIF2C3                0.803   eukaryotic translation initiation factor 2C, 3 isofo...
EIF2C4                0.793   eukaryotic translation initiation factor 2C, 4 [Homo...
EIF2C3                0.630   eukaryotic translation initiation factor 2C, 3 isofo...
PIWIL1                0.082   piwi-like 1 
PIWIL4                0.082   piwi-like 4 
PIWIL3                0.075   piwi-like 3 
PIWIL2                0.071   piwi-like 2 
PIWIL2                0.071   piwi-like 2 
LOC652554             0.014   PREDICTED: similar to piwi like homolog 2 
WASF2                 0.005   WAS protein family, member 2 
HCN2                  0.005   hyperpolarization activated cyclic nucleotide-gated...
EVL                   0.005   Enah/Vasp-like 
DAAM1                 0.005   dishevelled-associated activator of morphogenesis 1 ...
PELP1                 0.004   proline, glutamic acid and leucine rich protein 1 [...
MEPCE                 0.004   bin3, bicoid-interacting 3 
YLPM1                 0.004   YLP motif containing 1 
CPSF6                 0.004   cleavage and polyadenylation specific factor 6, 68 ...
CLTCL1                0.004   clathrin, heavy polypeptide-like 1 isoform 2 
CLTCL1                0.004   clathrin, heavy polypeptide-like 1 isoform 1 
FHDC1                 0.004   FH2 domain containing 1 
SMR3B                 0.004   submaxillary gland androgen regulated protein 3 homol...
BRF1                  0.003   transcription initiation factor IIIB isoform 1 [Homo...
APBB1IP               0.003   amyloid beta (A4) precursor protein-binding, family ...
ZFHX4                 0.003   zinc finger homeodomain 4 
LMTK3                 0.003   lemur tyrosine kinase 3 
VPS37C                0.003   vacuolar protein sorting 37C 
GGN                   0.003   gametogenetin 
WAS                   0.003   Wiskott-Aldrich syndrome protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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