Guide to the Human Genome
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Name: EIF2C3 Sequence: fasta or formatted (860aa) NCBI GI: 29294647
Description:

eukaryotic translation initiation factor 2C, 3 isoform a

Referenced in:

RNases and RNA Stability
Translation Factors

Other entries for this name:
alt prot [626aa] eukaryotic translation initiation factor 2C, 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         53           2
 C cysteine            2.4         21           1
 D aspartate           4.9         42           2
 E glutamate           4.7         40           2
 F phenylalanine       4.0         34           2
 G glycine             6.4         55           3
 H histidine           3.7         32           2
 I isoleucine          5.2         45           2
 K lysine              5.5         47           2
 L leucine             7.7         66           2
 M methionine          2.4         21           2
 N asparagine          2.4         21           2
 P proline             6.6         57           2
 Q glutamine           5.8         50           2
 R arginine            7.2         62           2
 S serine              4.9         42           1
 T threonine           6.5         56           2
 V valine              8.8         76           2
 W tryptophan          0.7          6           1
 Y tyrosine            4.0         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 2C, 3 isofo... 
EIF2C1                0.849   eukaryotic translation initiation factor 2C, 1 
EIF2C4                0.811   eukaryotic translation initiation factor 2C, 4 [Homo...
EIF2C2                0.802   eukaryotic translation initiation factor 2C, 2 [Homo...
EIF2C3                0.723   eukaryotic translation initiation factor 2C, 3 isofo...
PIWIL4                0.081   piwi-like 4 
PIWIL1                0.079   piwi-like 1 
PIWIL2                0.070   piwi-like 2 
PIWIL2                0.070   piwi-like 2 
PIWIL3                0.068   piwi-like 3 
LOC652554             0.014   PREDICTED: similar to piwi like homolog 2 
LATS2                 0.005   LATS, large tumor suppressor, homolog 2 
VPS41                 0.005   vacuolar protein sorting 41 isoform 2 
VPS41                 0.005   vacuolar protein sorting 41 isoform 1 
ZNF469                0.003   zinc finger protein 469 
CDK7                  0.003   cyclin-dependent kinase 7 
USP19                 0.003   ubiquitin thioesterase 19 
AES                   0.003   amino-terminal enhancer of split isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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