Guide to the Human Genome
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Name: PIWIL1 Sequence: fasta or formatted (861aa) NCBI GI: 66346725
Description:

piwi-like 1

Referenced in:

RNases and RNA Stability
Stem Cells and Early Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         42           2
 C cysteine            1.9         16           1
 D aspartate           5.2         45           2
 E glutamate           4.3         37           2
 F phenylalanine       3.7         32           2
 G glycine             6.7         58           2
 H histidine           2.2         19           1
 I isoleucine          6.0         52           2
 K lysine              5.2         45           2
 L leucine             9.8         84           2
 M methionine          2.2         19           1
 N asparagine          4.8         41           2
 P proline             5.0         43           3
 Q glutamine           6.3         54           2
 R arginine            8.1         70           3
 S serine              5.6         48           2
 T threonine           6.2         53           2
 V valine              6.5         56           2
 W tryptophan          1.3         11           1
 Y tyrosine            4.2         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   piwi-like 1 
PIWIL3                0.485   piwi-like 3 
PIWIL4                0.469   piwi-like 4 
PIWIL2                0.377   piwi-like 2 
PIWIL2                0.377   piwi-like 2 
LOC652554             0.121   PREDICTED: similar to piwi like homolog 2 
EIF2C2                0.083   eukaryotic translation initiation factor 2C, 2 [Homo...
EIF2C1                0.080   eukaryotic translation initiation factor 2C, 1 
EIF2C3                0.080   eukaryotic translation initiation factor 2C, 3 isofo...
EIF2C4                0.078   eukaryotic translation initiation factor 2C, 4 [Homo...
EIF2C3                0.073   eukaryotic translation initiation factor 2C, 3 isofo...
LOC100292840          0.014   PREDICTED: similar to XAGE-3 protein 
LOC100289968          0.014   PREDICTED: hypothetical protein XP_002347379 
LOC100289417          0.014   PREDICTED: hypothetical protein XP_002343217 
PAGE4                 0.012   G antigen, family C, 1 
PAGE3                 0.010   P antigen family, member 3 (prostate associated) [Ho...
DICER1                0.009   dicer1 
DICER1                0.009   dicer1 
XAGE3                 0.008   XAGE-3 protein 
XAGE3                 0.008   XAGE-3 protein 
XAGE5                 0.006   X antigen family, member 5 
PAGE5                 0.005   P antigen family, member 5 isoform 2 
PAGE5                 0.005   P antigen family, member 5 isoform 1 
PAGE2B                0.005   P antigen family, member 2B 
ZMAT1                 0.005   zinc finger, matrin type 1 isoform 1 
XYLT2                 0.005   xylosyltransferase II 
EIF3B                 0.005   eukaryotic translation initiation factor 3, subunit ...
EIF3B                 0.005   eukaryotic translation initiation factor 3, subunit ...
PAGE2                 0.004   P antigen family, member 2 
ZMAT1                 0.004   zinc finger, matrin type 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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