BRF1 14004

Name: BRF1	Sequence: fasta or formatted (677aa)		NCBI GI: 22035556
Description: transcription initiation factor IIIB isoform 1		Referenced in: RNA Metabolism RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [473aa] transcription initiation factor IIIB isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 60 3 C cysteine 2.5 17 1 D aspartate 6.1 41 2 E glutamate 10.0 68 3 F phenylalanine 1.8 12 2 G glycine 8.4 57 3 H histidine 2.5 17 2 I isoleucine 3.8 26 2 K lysine 5.5 37 2 L leucine 10.6 72 3 M methionine 2.1 14 2 N asparagine 2.2 15 1 P proline 4.7 32 2 Q glutamine 3.2 22 1 R arginine 6.9 47 3 S serine 8.9 60 2 T threonine 4.4 30 1 V valine 5.0 34 2 W tryptophan 0.4 3 1 Y tyrosine 1.9 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription initiation factor IIIB isoform 1 [Homo... BRF1 0.687 transcription initiation factor IIIB isoform 3 [Homo... GTF2B 0.038 general transcription factor IIB BRF2 0.020 RNA polymerase III transcription initiation factor B... HDGF2 0.014 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.014 hepatoma-derived growth factor-related protein 2 iso... PPM1G 0.013 protein phosphatase 1G PPM1G 0.013 protein phosphatase 1G C1orf173 0.011 hypothetical protein LOC127254 DCHS1 0.011 dachsous 1 precursor KIF1B 0.011 kinesin family member 1B isoform b PHLDB1 0.011 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.011 pleckstrin homology-like domain, family B, member 1 ... CDC2L1 0.011 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.011 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.010 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.010 cell division cycle 2-like 1 (PITSLRE proteins) isof... PCNT 0.010 pericentrin CDC2L1 0.010 cell division cycle 2-like 1 (PITSLRE proteins) isof... AEBP2 0.009 AE binding protein 2 isoform b AEBP2 0.009 AE binding protein 2 isoform a CDC2L2 0.009 cell division cycle 2-like 2 isoform 4 CDC2L2 0.009 cell division cycle 2-like 2 isoform 1 CALCOCO1 0.009 coiled-coil transcriptional coactivator isoform 2 [... CUX1 0.009 cut-like homeobox 1 isoform a EIF5B 0.009 eukaryotic translation initiation factor 5B C10orf12 0.009 hypothetical protein LOC26148 GDAP1L1 0.009 ganglioside-induced differentiation-associated prote... NEFH 0.008 neurofilament, heavy polypeptide 200kDa CROCC 0.008 ciliary rootlet coiled-coil Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.