IFNE 24903

Name: IFNE	Sequence: fasta or formatted (208aa)		NCBI GI: 28882045
Description: interferon, epsilon		Referenced in: Interferon
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 7 1 C cysteine 1.4 3 1 D aspartate 2.9 6 1 E glutamate 6.7 14 2 F phenylalanine 6.2 13 2 G glycine 3.4 7 1 H histidine 3.4 7 1 I isoleucine 6.2 13 2 K lysine 6.2 13 1 L leucine 17.3 36 2 M methionine 2.4 5 1 N asparagine 3.8 8 1 P proline 2.4 5 1 Q glutamine 10.1 21 2 R arginine 4.8 10 2 S serine 7.2 15 1 T threonine 5.3 11 2 V valine 3.4 7 1 W tryptophan 1.0 2 1 Y tyrosine 2.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon, epsilon IFNB1 0.229 interferon, beta 1, fibroblast IFNA1 0.222 interferon, alpha 1 IFNA13 0.222 interferon, alpha 13 precursor IFNA14 0.219 interferon, alpha 14 IFNA10 0.216 interferon, alpha 10 IFNA17 0.211 interferon, alpha 17 IFNW1 0.211 interferon, omega 1 IFNA4 0.209 interferon, alpha 4 IFNA7 0.201 interferon, alpha 7 IFNA5 0.198 interferon, alpha 5 IFNA2 0.198 interferon, alpha 2 IFNA8 0.196 interferon, alpha 8 IFNA6 0.196 interferon, alpha 6 IFNA21 0.193 interferon, alpha 21 IFNA16 0.193 interferon, alpha 16 IFNK 0.152 interferon kappa precursor LRSAM1 0.013 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.013 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.013 leucine rich repeat and sterile alpha motif containi... BSN 0.013 bassoon protein LAMC1 0.013 laminin, gamma 1 precursor PCLO 0.013 piccolo isoform 2 PCLO 0.013 piccolo isoform 1 LOC728636 0.010 PREDICTED: similar to golgi autoantigen, golgin sub... LOC647042 0.010 PREDICTED: hypothetical protein isoform 2 CCDC88A 0.010 coiled-coil domain containing 88A isoform 2 CCDC88A 0.010 coiled-coil domain containing 88A isoform 1 LOC440295 0.010 hypothetical protein LOC440295 LOC100133220 0.010 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.