IFNW1 28876

Name: IFNW1	Sequence: fasta or formatted (195aa)		NCBI GI: 4504605
Description: interferon, omega 1		Referenced in: Interferon
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 10 2 C cysteine 2.1 4 1 D aspartate 3.6 7 1 E glutamate 5.1 10 1 F phenylalanine 4.1 8 1 G glycine 5.1 10 1 H histidine 4.1 8 1 I isoleucine 2.6 5 1 K lysine 4.1 8 2 L leucine 16.9 33 2 M methionine 5.1 10 1 N asparagine 2.1 4 1 P proline 3.1 6 1 Q glutamine 7.2 14 2 R arginine 7.2 14 2 S serine 9.7 19 2 T threonine 4.1 8 1 V valine 5.6 11 2 W tryptophan 1.0 2 1 Y tyrosine 2.1 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon, omega 1 IFNA10 0.525 interferon, alpha 10 IFNA5 0.519 interferon, alpha 5 IFNA2 0.519 interferon, alpha 2 IFNA8 0.516 interferon, alpha 8 IFNA4 0.516 interferon, alpha 4 IFNA17 0.514 interferon, alpha 17 IFNA14 0.505 interferon, alpha 14 IFNA21 0.497 interferon, alpha 21 IFNA7 0.497 interferon, alpha 7 IFNA6 0.492 interferon, alpha 6 IFNA16 0.489 interferon, alpha 16 IFNA13 0.486 interferon, alpha 13 precursor IFNA1 0.481 interferon, alpha 1 IFNE 0.225 interferon, epsilon IFNB1 0.212 interferon, beta 1, fibroblast IFNK 0.181 interferon kappa precursor KIF4B 0.014 kinesin family member 4B SAMD4A 0.011 sterile alpha motif domain containing 4 isoform 3 [... ARHGAP29 0.011 PTPL1-associated RhoGAP 1 C9orf5 0.008 hypothetical protein LOC23731 ACOX1 0.008 acyl-Coenzyme A oxidase 1 isoform b ACOX1 0.008 acyl-Coenzyme A oxidase 1 isoform a DIABLO 0.008 diablo isoform 3 precursor SYNE1 0.008 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.008 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.008 spectrin repeat containing, nuclear envelope 1 isof... LOC653111 0.005 PREDICTED: similar to ring finger protein 18 TRIM49 0.005 ring finger protein 18 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.