IFNA6 874

Name: IFNA6	Sequence: fasta or formatted (189aa)		NCBI GI: 11128015
Description: interferon, alpha 6		Referenced in: Interferon
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 11 1 C cysteine 3.2 6 1 D aspartate 5.3 10 1 E glutamate 7.4 14 2 F phenylalanine 5.3 10 1 G glycine 2.1 4 2 H histidine 2.1 4 1 I isoleucine 3.2 6 1 K lysine 4.8 9 2 L leucine 13.8 26 2 M methionine 4.2 8 2 N asparagine 2.6 5 1 P proline 2.6 5 1 Q glutamine 6.3 12 2 R arginine 7.9 15 2 S serine 9.0 17 3 T threonine 4.2 8 1 V valine 5.8 11 2 W tryptophan 1.6 3 1 Y tyrosine 2.6 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon, alpha 6 IFNA5 0.851 interferon, alpha 5 IFNA14 0.825 interferon, alpha 14 IFNA13 0.820 interferon, alpha 13 precursor IFNA2 0.817 interferon, alpha 2 IFNA1 0.814 interferon, alpha 1 IFNA4 0.794 interferon, alpha 4 IFNA10 0.789 interferon, alpha 10 IFNA21 0.786 interferon, alpha 21 IFNA17 0.775 interferon, alpha 17 IFNA16 0.763 interferon, alpha 16 IFNA7 0.755 interferon, alpha 7 IFNA8 0.752 interferon, alpha 8 IFNW1 0.504 interferon, omega 1 IFNE 0.214 interferon, epsilon IFNB1 0.189 interferon, beta 1, fibroblast IFNK 0.141 interferon kappa precursor NUP160 0.008 nucleoporin 160kDa USP4 0.008 ubiquitin specific protease 4 isoform a USP4 0.008 ubiquitin specific protease 4 isoform b MYH8 0.008 myosin, heavy chain 8, skeletal muscle, perinatal [... KIF2B 0.006 kinesin family member 2B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.