IFNA1 2997

Name: IFNA1	Sequence: fasta or formatted (189aa)		NCBI GI: 13128950
Description: interferon, alpha 1		Referenced in: Interferon
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 12 2 C cysteine 3.7 7 1 D aspartate 5.8 11 1 E glutamate 7.9 15 2 F phenylalanine 4.8 9 1 G glycine 2.1 4 1 H histidine 1.6 3 1 I isoleucine 3.7 7 1 K lysine 4.8 9 2 L leucine 14.3 27 2 M methionine 4.2 8 1 N asparagine 3.2 6 1 P proline 3.7 7 1 Q glutamine 5.3 10 2 R arginine 6.3 12 2 S serine 9.5 18 2 T threonine 4.8 9 2 V valine 4.8 9 2 W tryptophan 1.1 2 1 Y tyrosine 2.1 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon, alpha 1 IFNA13 0.994 interferon, alpha 13 precursor IFNA5 0.842 interferon, alpha 5 IFNA6 0.816 interferon, alpha 6 IFNA14 0.811 interferon, alpha 14 IFNA4 0.788 interferon, alpha 4 IFNA21 0.788 interferon, alpha 21 IFNA2 0.780 interferon, alpha 2 IFNA17 0.777 interferon, alpha 17 IFNA10 0.777 interferon, alpha 10 IFNA7 0.754 interferon, alpha 7 IFNA16 0.734 interferon, alpha 16 IFNA8 0.712 interferon, alpha 8 IFNW1 0.494 interferon, omega 1 IFNE 0.243 interferon, epsilon IFNB1 0.186 interferon, beta 1, fibroblast IFNK 0.147 interferon kappa precursor RNF144A 0.014 ring finger protein 144 MCF2 0.008 MCF.2 cell line derived transforming sequence isofo... MCF2 0.008 MCF.2 cell line derived transforming sequence isofo... COG3 0.008 component of golgi transport complex 3 EFCAB5 0.006 EF-hand calcium binding domain 5 isoform b EFCAB5 0.006 EF-hand calcium binding domain 5 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.