Guide to the Human Genome
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Name: IFNA14 Sequence: fasta or formatted (189aa) NCBI GI: 170763491
Description:

interferon, alpha 14

Referenced in:

Interferon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         12           2
 C cysteine            3.2          6           1
 D aspartate           3.7          7           1
 E glutamate           7.9         15           2
 F phenylalanine       6.3         12           1
 G glycine             1.6          3           1
 H histidine           1.6          3           1
 I isoleucine          3.7          7           1
 K lysine              5.8         11           2
 L leucine            12.2         23           2
 M methionine          6.3         12           2
 N asparagine          4.8          9           2
 P proline             2.6          5           1
 Q glutamine           6.9         13           2
 R arginine            5.8         11           2
 S serine              9.0         17           2
 T threonine           4.2          8           1
 V valine              4.8          9           2
 W tryptophan          1.1          2           1
 Y tyrosine            2.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interferon, alpha 14 
IFNA5                 0.864   interferon, alpha 5 
IFNA10                0.847   interferon, alpha 10 
IFNA4                 0.839   interferon, alpha 4 
IFNA6                 0.830   interferon, alpha 6 
IFNA17                0.827   interferon, alpha 17 
IFNA16                0.822   interferon, alpha 16 
IFNA13                0.819   interferon, alpha 13 precursor 
IFNA1                 0.813   interferon, alpha 1 
IFNA7                 0.813   interferon, alpha 7 
IFNA2                 0.805   interferon, alpha 2 
IFNA21                0.805   interferon, alpha 21 
IFNA8                 0.779   interferon, alpha 8 
IFNW1                 0.521   interferon, omega 1 
IFNE                  0.241   interferon, epsilon 
IFNB1                 0.212   interferon, beta 1, fibroblast 
IFNK                  0.181   interferon kappa precursor 
MSH3                  0.014   mutS homolog 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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