IFNB1 28875

Name: IFNB1	Sequence: fasta or formatted (187aa)		NCBI GI: 4504603
Description: interferon, beta 1, fibroblast		Referenced in: Interferon
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 8 2 C cysteine 2.7 5 1 D aspartate 2.7 5 1 E glutamate 7.0 13 2 F phenylalanine 5.3 10 1 G glycine 3.2 6 1 H histidine 2.7 5 1 I isoleucine 6.4 12 1 K lysine 6.4 12 1 L leucine 16.0 30 3 M methionine 2.7 5 1 N asparagine 7.0 13 1 P proline 0.5 1 1 Q glutamine 6.4 12 2 R arginine 5.9 11 1 S serine 5.9 11 3 T threonine 5.3 10 2 V valine 2.7 5 1 W tryptophan 1.6 3 1 Y tyrosine 5.3 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon, beta 1, fibroblast IFNE 0.250 interferon, epsilon IFNA16 0.219 interferon, alpha 16 IFNW1 0.216 interferon, omega 1 IFNA5 0.211 interferon, alpha 5 IFNA14 0.211 interferon, alpha 14 IFNA17 0.211 interferon, alpha 17 IFNA4 0.208 interferon, alpha 4 IFNA2 0.205 interferon, alpha 2 IFNA7 0.202 interferon, alpha 7 IFNA10 0.202 interferon, alpha 10 IFNK 0.199 interferon kappa precursor IFNA21 0.191 interferon, alpha 21 IFNA6 0.188 interferon, alpha 6 IFNA1 0.185 interferon, alpha 1 IFNA13 0.185 interferon, alpha 13 precursor IFNA8 0.177 interferon, alpha 8 CAB39L 0.014 calcium binding protein 39-like CAB39L 0.014 calcium binding protein 39-like NUP88 0.014 nucleoporin 88kDa PHLPP2 0.011 PH domain and leucine rich repeat protein phosphatas... SLC26A3 0.011 solute carrier family 26, member 3 KTN1 0.011 kinectin 1 isoform a KTN1 0.011 kinectin 1 isoform c KTN1 0.011 kinectin 1 isoform a KDM4A 0.011 jumonji domain containing 2A KIF6 0.011 kinesin family member 6 CEP63 0.008 centrosomal protein 63 isoform b CEP63 0.008 centrosomal protein 63 isoform a CEP63 0.008 centrosomal protein 63 isoform d Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.