Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CBFA2T3 Sequence: fasta or formatted (653aa) NCBI GI: 28872803
Description:

myeloid translocation gene on chromosome 16 isoform MTG16a

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [567aa] myeloid translocation gene on chromosome 16 isoform MTG16b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         66           3
 C cysteine            2.6         17           1
 D aspartate           4.0         26           1
 E glutamate           7.4         48           2
 F phenylalanine       1.8         12           1
 G glycine             6.0         39           2
 H histidine           4.0         26           3
 I isoleucine          1.8         12           1
 K lysine              4.0         26           2
 L leucine             8.9         58           3
 M methionine          1.7         11           1
 N asparagine          3.1         20           2
 P proline            11.2         73           5
 Q glutamine           4.0         26           2
 R arginine            8.3         54           2
 S serine              9.6         63           3
 T threonine           5.5         36           2
 V valine              4.0         26           2
 W tryptophan          1.1          7           1
 Y tyrosine            1.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myeloid translocation gene on chromosome 16 isoform ... 
CBFA2T3               0.855   myeloid translocation gene on chromosome 16 isoform ...
RUNX1T1               0.629   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.629   acute myelogenous leukemia 1 translocation 1 protein ...
RUNX1T1               0.624   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.624   acute myelogenous leukemia 1 translocation 1 protein...
CBFA2T2               0.493   core-binding factor, runt domain, alpha subunit 2; tr...
CBFA2T2               0.493   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.492   core-binding factor, runt domain, alpha subunit 2; t...
DEAF1                 0.037   deformed epidermal autoregulatory factor 1 
LOC100294411          0.037   PREDICTED: similar to deformed epidermal autoregula...
TAF4                  0.022   TBP-associated factor 4 
ZMYND10               0.018   zinc finger, MYND domain-containing 10 
BRD4                  0.016   bromodomain-containing protein 4 isoform long 
TDRD1                 0.015   tudor domain containing 1 
GPR153                0.015   G protein-coupled receptor 153 
ZMYND8                0.015   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.015   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.015   zinc finger, MYND-type containing 8 isoform b 
TAF4B                 0.015   TAF4b RNA polymerase II, TATA box binding protein (...
ZFPM1                 0.014   zinc finger protein, multitype 1 
ABL1                  0.014   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.014   c-abl oncogene 1, receptor tyrosine kinase isoform b...
WAS                   0.013   Wiskott-Aldrich syndrome protein 
ANKMY2                0.013   ankyrin repeat and MYND domain containing 2 
ZMYND11               0.013   zinc finger, MYND domain containing 11 isoform a [H...
ZMYND11               0.013   zinc finger, MYND domain containing 11 isoform a [H...
INSM1                 0.012   insulinoma-associated 1 
EGLN1                 0.011   egl nine homolog 1 
NACA                  0.011   nascent polypeptide-associated complex alpha subuni...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press