Guide to the Human Genome
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Name: ZMYND10 Sequence: fasta or formatted (440aa) NCBI GI: 37594444
Description:

zinc finger, MYND domain-containing 10

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         30           2
 C cysteine            3.4         15           2
 D aspartate           3.6         16           1
 E glutamate          10.0         44           2
 F phenylalanine       3.0         13           2
 G glycine             4.5         20           2
 H histidine           3.4         15           2
 I isoleucine          2.7         12           2
 K lysine              5.2         23           2
 L leucine            14.5         64           3
 M methionine          1.8          8           1
 N asparagine          2.5         11           1
 P proline             4.8         21           2
 Q glutamine           6.8         30           2
 R arginine            5.9         26           2
 S serine              6.1         27           1
 T threonine           4.3         19           1
 V valine              6.4         28           2
 W tryptophan          2.3         10           1
 Y tyrosine            1.8          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, MYND domain-containing 10 
CBFA2T3               0.027   myeloid translocation gene on chromosome 16 isoform ...
CBFA2T3               0.027   myeloid translocation gene on chromosome 16 isoform ...
RUNX1T1               0.027   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.027   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.027   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.027   acute myelogenous leukemia 1 translocation 1 protein ...
EGLN1                 0.022   egl nine homolog 1 
CBFA2T2               0.018   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.018   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.018   core-binding factor, runt domain, alpha subunit 2; tr...
ZMYND8                0.018   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.018   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.018   zinc finger, MYND-type containing 8 isoform b 
ANKMY2                0.017   ankyrin repeat and MYND domain containing 2 
ZMYND17               0.017   zinc finger, MYND domain containing 17 
TDRD1                 0.017   tudor domain containing 1 
DEAF1                 0.016   deformed epidermal autoregulatory factor 1 
LOC100294411          0.016   PREDICTED: similar to deformed epidermal autoregula...
USP19                 0.015   ubiquitin thioesterase 19 
SMYD2                 0.015   SET and MYND domain containing 2 
ZMYND11               0.011   zinc finger, MYND domain containing 11 isoform a [H...
ZMYND11               0.011   zinc finger, MYND domain containing 11 isoform a [H...
PDCD2                 0.011   programmed cell death 2 isoform 2 
PDCD2                 0.011   programmed cell death 2 isoform 1 
ZMYND19               0.011   zinc finger, MYND domain containing 19 
SMYD3                 0.010   SET and MYND domain containing 3 
ZFYVE19               0.009   zinc finger, FYVE domain containing 19 
SMYD1                 0.007   SET and MYND domain containing 1 
INSRR                 0.007   insulin receptor-related receptor precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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