Guide to the Human Genome
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Name: CBFA2T2 Sequence: fasta or formatted (604aa) NCBI GI: 4826663
Description:

core-binding factor, runt domain, alpha subunit 2; translocated to, 2 isoform MTGR1b

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [595aa] core-binding factor, runt domain, alpha subunit 2
alt prot [575aa] core-binding factor, runt domain, alpha subunit 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         47           2
 C cysteine            2.3         14           1
 D aspartate           3.1         19           1
 E glutamate           8.3         50           2
 F phenylalanine       2.5         15           1
 G glycine             5.3         32           2
 H histidine           3.6         22           2
 I isoleucine          3.3         20           1
 K lysine              4.6         28           2
 L leucine             8.6         52           3
 M methionine          1.8         11           1
 N asparagine          4.8         29           1
 P proline             8.6         52           3
 Q glutamine           5.0         30           2
 R arginine            7.5         45           2
 S serine              8.9         54           2
 T threonine           6.3         38           2
 V valine              5.1         31           1
 W tryptophan          1.2          7           1
 Y tyrosine            1.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   core-binding factor, runt domain, alpha subunit 2; tr... 
CBFA2T2               0.969   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.954   core-binding factor, runt domain, alpha subunit 2; t...
RUNX1T1               0.603   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.603   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.603   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.603   acute myelogenous leukemia 1 translocation 1 protein ...
CBFA2T3               0.549   myeloid translocation gene on chromosome 16 isoform ...
CBFA2T3               0.539   myeloid translocation gene on chromosome 16 isoform ...
DEAF1                 0.036   deformed epidermal autoregulatory factor 1 
LOC100294411          0.036   PREDICTED: similar to deformed epidermal autoregula...
ZFHX4                 0.021   zinc finger homeodomain 4 
TAF4                  0.020   TBP-associated factor 4 
TAF4B                 0.019   TAF4b RNA polymerase II, TATA box binding protein (...
RBM26                 0.017   RNA binding motif protein 26 
ANKMY2                0.016   ankyrin repeat and MYND domain containing 2 
ZMYND19               0.015   zinc finger, MYND domain containing 19 
KIAA1217              0.014   sickle tail isoform 3 
KIAA1217              0.014   sickle tail isoform 2 
KIAA1217              0.014   sickle tail isoform 1 
ZMYND10               0.013   zinc finger, MYND domain-containing 10 
TDRD1                 0.012   tudor domain containing 1 
ZMYND8                0.012   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.012   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.012   zinc finger, MYND-type containing 8 isoform b 
FMN1                  0.012   formin 1 
VASP                  0.012   vasodilator-stimulated phosphoprotein 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.012   PREDICTED: hypothetical protein LOC80164 
BAG3                  0.012   BCL2-associated athanogene 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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