Guide to the Human Genome
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Name: CBFA2T3 Sequence: fasta or formatted (567aa) NCBI GI: 28872805
Description:

myeloid translocation gene on chromosome 16 isoform MTG16b

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [653aa] myeloid translocation gene on chromosome 16 isoform MTG16a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         54           3
 C cysteine            2.3         13           1
 D aspartate           4.1         23           1
 E glutamate           8.1         46           2
 F phenylalanine       1.9         11           1
 G glycine             5.1         29           1
 H histidine           3.9         22           3
 I isoleucine          2.1         12           1
 K lysine              3.9         22           2
 L leucine             9.0         51           3
 M methionine          1.4          8           1
 N asparagine          3.5         20           2
 P proline            11.5         65           5
 Q glutamine           4.4         25           2
 R arginine            8.1         46           2
 S serine              9.0         51           3
 T threonine           5.8         33           2
 V valine              4.1         23           2
 W tryptophan          1.1          6           1
 Y tyrosine            1.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myeloid translocation gene on chromosome 16 isoform ... 
CBFA2T3               0.988   myeloid translocation gene on chromosome 16 isoform ...
RUNX1T1               0.733   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.733   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.733   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.733   acute myelogenous leukemia 1 translocation 1 protein ...
CBFA2T2               0.580   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.580   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.580   core-binding factor, runt domain, alpha subunit 2; tr...
DEAF1                 0.043   deformed epidermal autoregulatory factor 1 
LOC100294411          0.043   PREDICTED: similar to deformed epidermal autoregula...
TAF4                  0.026   TBP-associated factor 4 
ZMYND10               0.021   zinc finger, MYND domain-containing 10 
TAF4B                 0.021   TAF4b RNA polymerase II, TATA box binding protein (...
TDRD1                 0.017   tudor domain containing 1 
ZMYND8                0.017   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.017   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.017   zinc finger, MYND-type containing 8 isoform b 
NACA                  0.017   nascent polypeptide-associated complex alpha subuni...
ANKMY2                0.015   ankyrin repeat and MYND domain containing 2 
ZMYND11               0.015   zinc finger, MYND domain containing 11 isoform a [H...
ZMYND11               0.015   zinc finger, MYND domain containing 11 isoform a [H...
BAI1                  0.015   brain-specific angiogenesis inhibitor 1 precursor [...
BCL9L                 0.015   B-cell CLL/lymphoma 9-like 
EGLN1                 0.013   egl nine homolog 1 
HOXA3                 0.013   homeobox A3 isoform b 
HOXA3                 0.013   homeobox A3 isoform a 
HOXA3                 0.013   homeobox A3 isoform a 
ZMYND17               0.013   zinc finger, MYND domain containing 17 
COL15A1               0.013   alpha 1 type XV collagen precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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