Guide to the Human Genome
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Name: CBFA2T2 Sequence: fasta or formatted (575aa) NCBI GI: 89353295
Description:

core-binding factor, runt domain, alpha subunit 2; translocated to, 2 isoform MTGR1a

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [604aa] core-binding factor, runt domain, alpha subunit 2
alt prot [595aa] core-binding factor, runt domain, alpha subunit 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         44           2
 C cysteine            2.4         14           1
 D aspartate           3.3         19           1
 E glutamate           8.2         47           2
 F phenylalanine       2.6         15           1
 G glycine             5.2         30           2
 H histidine           3.8         22           2
 I isoleucine          3.1         18           1
 K lysine              4.2         24           2
 L leucine             8.7         50           3
 M methionine          1.7         10           1
 N asparagine          5.0         29           1
 P proline             8.7         50           3
 Q glutamine           4.9         28           2
 R arginine            7.5         43           2
 S serine              9.0         52           2
 T threonine           6.6         38           2
 V valine              4.9         28           1
 W tryptophan          1.0          6           1
 Y tyrosine            1.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   core-binding factor, runt domain, alpha subunit 2; t... 
CBFA2T2               1.000   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               1.000   core-binding factor, runt domain, alpha subunit 2; tr...
RUNX1T1               0.633   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.633   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.633   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.633   acute myelogenous leukemia 1 translocation 1 protein ...
CBFA2T3               0.575   myeloid translocation gene on chromosome 16 isoform ...
CBFA2T3               0.563   myeloid translocation gene on chromosome 16 isoform ...
DEAF1                 0.037   deformed epidermal autoregulatory factor 1 
LOC100294411          0.037   PREDICTED: similar to deformed epidermal autoregula...
TAF4                  0.021   TBP-associated factor 4 
TAF4B                 0.020   TAF4b RNA polymerase II, TATA box binding protein (...
ANKMY2                0.016   ankyrin repeat and MYND domain containing 2 
ZMYND19               0.016   zinc finger, MYND domain containing 19 
ZFHX4                 0.015   zinc finger homeodomain 4 
RBM26                 0.015   RNA binding motif protein 26 
KIAA1217              0.014   sickle tail isoform 3 
KIAA1217              0.014   sickle tail isoform 2 
KIAA1217              0.014   sickle tail isoform 1 
ZMYND10               0.014   zinc finger, MYND domain-containing 10 
TDRD1                 0.013   tudor domain containing 1 
ZMYND8                0.013   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.013   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.013   zinc finger, MYND-type containing 8 isoform b 
YLPM1                 0.012   YLP motif containing 1 
EGLN1                 0.011   egl nine homolog 1 
HOXD3                 0.010   homeobox D3 
SMYD3                 0.010   SET and MYND domain containing 3 
ASAP2                 0.010   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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