Guide to the Human Genome
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Name: RUNX1T1 Sequence: fasta or formatted (604aa) NCBI GI: 28329416
Description:

acute myelogenous leukemia 1 translocation 1 protein isoform MTG8b

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [567aa] acute myelogenous leukemia 1 translocation 1 protein isoform MTG8c
alt prot [567aa] acute myelogenous leukemia 1 translocation 1 protein isoform MTG8c
alt prot [577aa] acute myelogenous leukemia 1 translocation 1 protein isoform MTG8a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         42           2
 C cysteine            2.3         14           1
 D aspartate           5.0         30           2
 E glutamate           7.0         42           2
 F phenylalanine       2.0         12           1
 G glycine             5.0         30           3
 H histidine           4.1         25           3
 I isoleucine          2.6         16           1
 K lysine              4.5         27           2
 L leucine             8.3         50           3
 M methionine          2.0         12           1
 N asparagine          4.5         27           2
 P proline             8.8         53           4
 Q glutamine           5.3         32           3
 R arginine            7.9         48           2
 S serine              9.3         56           7
 T threonine           7.9         48           2
 V valine              3.6         22           1
 W tryptophan          1.2          7           1
 Y tyrosine            1.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acute myelogenous leukemia 1 translocation 1 protein... 
RUNX1T1               0.950   acute myelogenous leukemia 1 translocation 1 protein ...
RUNX1T1               0.936   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.936   acute myelogenous leukemia 1 translocation 1 protein...
CBFA2T3               0.685   myeloid translocation gene on chromosome 16 isoform ...
CBFA2T3               0.678   myeloid translocation gene on chromosome 16 isoform ...
CBFA2T2               0.596   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.596   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.596   core-binding factor, runt domain, alpha subunit 2; tr...
DEAF1                 0.044   deformed epidermal autoregulatory factor 1 
LOC100294411          0.044   PREDICTED: similar to deformed epidermal autoregula...
TAF4B                 0.024   TAF4b RNA polymerase II, TATA box binding protein (...
TAF4                  0.022   TBP-associated factor 4 
ZMYND10               0.020   zinc finger, MYND domain-containing 10 
ZMYND8                0.019   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.019   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.019   zinc finger, MYND-type containing 8 isoform b 
MUC2                  0.016   mucin 2 precursor 
TDRD1                 0.016   tudor domain containing 1 
ANKMY2                0.015   ankyrin repeat and MYND domain containing 2 
ZMYND11               0.015   zinc finger, MYND domain containing 11 isoform a [H...
ZMYND11               0.015   zinc finger, MYND domain containing 11 isoform a [H...
EGLN1                 0.014   egl nine homolog 1 
THAP7                 0.014   THAP domain containing 7 isoform 2 
THAP7                 0.014   THAP domain containing 7 isoform 1 
KIAA1217              0.013   sickle tail isoform 3 
KIAA1217              0.013   sickle tail isoform 2 
KIAA1217              0.013   sickle tail isoform 1 
ZMYND19               0.013   zinc finger, MYND domain containing 19 
TSC22D1               0.012   TSC22 domain family, member 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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