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Search of human proteins with 28827782
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28827782 zinc fingers and homeoboxes 3 [Homo sapiens]
(956 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28827782 zinc fingers and homeoboxes 3 [Homo sapiens] 1928 0.0
gi|63079683 zinc fingers and homeoboxes 1 [Homo sapiens] 499 e-141
gi|63079680 zinc fingers and homeoboxes 1 [Homo sapiens] 499 e-141
gi|7662342 zinc fingers and homeoboxes 2 [Homo sapiens] 436 e-122
gi|158631177 homeodomain leucine zipper protein [Homo sapiens] 103 1e-21
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 56 1e-07
gi|226371735 iroquois homeobox 3 [Homo sapiens] 49 2e-05
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 48 4e-05
gi|169881277 PROP paired-like homeobox 1 [Homo sapiens] 47 9e-05
gi|239749213 PREDICTED: mucin 3B, cell surface associated, parti... 47 9e-05
gi|209954811 zinc finger protein 507 [Homo sapiens] 46 1e-04
gi|55925468 zinc finger protein 507 [Homo sapiens] 46 1e-04
gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens] 46 1e-04
gi|42544241 iroquois homeobox protein 6 [Homo sapiens] 45 2e-04
gi|22218349 diencephalon/mesencephalon homeobox 1 isoform b [Hom... 45 2e-04
gi|27436936 diencephalon/mesencephalon homeobox 1 isoform a [Hom... 45 2e-04
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 44 7e-04
gi|197100900 iroquois homeobox 2 [Homo sapiens] 43 0.001
gi|39930475 iroquois homeobox 2 [Homo sapiens] 43 0.001
gi|7705555 iroquois homeobox 4 [Homo sapiens] 43 0.002
gi|5174681 SIX homeobox 1 [Homo sapiens] 42 0.003
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap... 42 0.003
gi|116256475 zinc finger protein 827 [Homo sapiens] 42 0.004
gi|219275578 SIX homeobox 2 [Homo sapiens] 41 0.005
gi|51479177 iroquois homeobox protein 1 [Homo sapiens] 41 0.006
gi|24308179 CTTNBP2 N-terminal like [Homo sapiens] 41 0.006
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 41 0.006
gi|15375314 LIM homeobox protein 4 [Homo sapiens] 41 0.006
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 40 0.010
gi|46359075 zinc finger protein 423 [Homo sapiens] 40 0.010
>gi|28827782 zinc fingers and homeoboxes 3 [Homo sapiens]
Length = 956
Score = 1928 bits (4995), Expect = 0.0
Identities = 956/956 (100%), Positives = 956/956 (100%)
Query: 1 MASKRKSTTPCMIPVKTVVLQDASMEAQPAETLPEGPQQDLPPEASAASSEAAQNPSSTD 60
MASKRKSTTPCMIPVKTVVLQDASMEAQPAETLPEGPQQDLPPEASAASSEAAQNPSSTD
Sbjct: 1 MASKRKSTTPCMIPVKTVVLQDASMEAQPAETLPEGPQQDLPPEASAASSEAAQNPSSTD 60
Query: 61 GSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLAKT 120
GSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLAKT
Sbjct: 61 GSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLAKT 120
Query: 121 PEGLSLHNATCHSGEASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADGQAEII 180
PEGLSLHNATCHSGEASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADGQAEII
Sbjct: 121 PEGLSLHNATCHSGEASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADGQAEII 180
Query: 181 ITKTPIMKIMKGKAEAKKIHTLKENVPSQPVGEALPKLSTGEMEVREGDHSFINGAVPVS 240
ITKTPIMKIMKGKAEAKKIHTLKENVPSQPVGEALPKLSTGEMEVREGDHSFINGAVPVS
Sbjct: 181 ITKTPIMKIMKGKAEAKKIHTLKENVPSQPVGEALPKLSTGEMEVREGDHSFINGAVPVS 240
Query: 241 QASASSAKNPHAANGPLIGTVPVLPAGIAQFLSLQQQPPVHAQHHVHQPLPTAKALPKVM 300
QASASSAKNPHAANGPLIGTVPVLPAGIAQFLSLQQQPPVHAQHHVHQPLPTAKALPKVM
Sbjct: 241 QASASSAKNPHAANGPLIGTVPVLPAGIAQFLSLQQQPPVHAQHHVHQPLPTAKALPKVM 300
Query: 301 IPLSSIPTYNAAMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQG 360
IPLSSIPTYNAAMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQG
Sbjct: 301 IPLSSIPTYNAAMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQG 360
Query: 361 ISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVASAGNVQHLIQAALPGHVVGQPEG 420
ISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVASAGNVQHLIQAALPGHVVGQPEG
Sbjct: 361 ISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVASAGNVQHLIQAALPGHVVGQPEG 420
Query: 421 TGGGLLVTQPLMANGLQATSSPLPLTVTSVPKQPGVAPINTVCSNTTSAVKVVNAAQSLL 480
TGGGLLVTQPLMANGLQATSSPLPLTVTSVPKQPGVAPINTVCSNTTSAVKVVNAAQSLL
Sbjct: 421 TGGGLLVTQPLMANGLQATSSPLPLTVTSVPKQPGVAPINTVCSNTTSAVKVVNAAQSLL 480
Query: 481 TACPSITSQAFLDASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRK 540
TACPSITSQAFLDASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRK
Sbjct: 481 TACPSITSQAFLDASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRK 540
Query: 541 WFSDRRYHCRNLKGSRAMIPGDHSSIIIDSVPEVSFSPSSKVPEVTCIPTTATLATHPSA 600
WFSDRRYHCRNLKGSRAMIPGDHSSIIIDSVPEVSFSPSSKVPEVTCIPTTATLATHPSA
Sbjct: 541 WFSDRRYHCRNLKGSRAMIPGDHSSIIIDSVPEVSFSPSSKVPEVTCIPTTATLATHPSA 600
Query: 601 KRQSWHQTPDFTPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWF 660
KRQSWHQTPDFTPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWF
Sbjct: 601 KRQSWHQTPDFTPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWF 660
Query: 661 SERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLASELRVSGENGSLEMPSSHILAER 720
SERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLASELRVSGENGSLEMPSSHILAER
Sbjct: 661 SERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLASELRVSGENGSLEMPSSHILAER 720
Query: 721 KVSPIKINLKNLRVTEANGRNEIPGLGACDPEDDESNKLAEQLPGKVSCKKTAQQRHLLR 780
KVSPIKINLKNLRVTEANGRNEIPGLGACDPEDDESNKLAEQLPGKVSCKKTAQQRHLLR
Sbjct: 721 KVSPIKINLKNLRVTEANGRNEIPGLGACDPEDDESNKLAEQLPGKVSCKKTAQQRHLLR 780
Query: 781 QLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRGNFPPGLL 840
QLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRGNFPPGLL
Sbjct: 781 QLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRGNFPPGLL 840
Query: 841 VIAPGNRELLQDYYMTHKMLYEEDLQNLCDKTQMSSQQVKQWFAEKMGEETRAVADTGSE 900
VIAPGNRELLQDYYMTHKMLYEEDLQNLCDKTQMSSQQVKQWFAEKMGEETRAVADTGSE
Sbjct: 841 VIAPGNRELLQDYYMTHKMLYEEDLQNLCDKTQMSSQQVKQWFAEKMGEETRAVADTGSE 900
Query: 901 DQGPGTGELTAVHKGMGDTYSEVSENSESWEPRVPEASSEPFDTSSPQAGRQLETD 956
DQGPGTGELTAVHKGMGDTYSEVSENSESWEPRVPEASSEPFDTSSPQAGRQLETD
Sbjct: 901 DQGPGTGELTAVHKGMGDTYSEVSENSESWEPRVPEASSEPFDTSSPQAGRQLETD 956
>gi|63079683 zinc fingers and homeoboxes 1 [Homo sapiens]
Length = 873
Score = 499 bits (1286), Expect = e-141
Identities = 340/995 (34%), Positives = 491/995 (49%), Gaps = 198/995 (19%)
Query: 1 MASKRKSTTPCMIPVKTVVLQDASMEAQPAETLPEGPQQDLPPEASAASSEAAQNP--SS 58
MAS+RKSTTPCM+ QD +E L EGP P E + A S ++ S
Sbjct: 1 MASRRKSTTPCMVLASE---QDPDLEL--ISDLDEGPPVLTPVENTRAESISSDEEVHES 55
Query: 59 TDGSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLA 118
D N ++G Y CKYC F++ D+ F H++SEH + + ++VC C+FL
Sbjct: 56 VDSD---NQQNKKVEGG-YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 111
Query: 119 KTPEGLSLHNATCHSGEASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADG--- 175
K + LS HN H GE +F + K +N + EQ+I + T E +AE A+
Sbjct: 112 KRYDALSEHNLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEV 171
Query: 176 -QAEIIITKTPIMKIMKGKAEAKKI---HTLKENVPSQPVGEALPKLSTGEMEVREGDHS 231
+ I I+KTPIMK+MK K E K+I H E+VP + E P E+ E S
Sbjct: 172 SSSGISISKTPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDRE----EIVENPSS 227
Query: 232 FINGAVPVSQASASSAKNPHAANGPLIGTVPVLPAGIAQFLSLQQQPPVHAQHHVHQPLP 291
+ S S S H + + T + G+AQ ++ V AQ +
Sbjct: 228 ----SASESNTSTSIVNRIHPSTASTVVTPAAVLPGLAQVITA-----VSAQQN------ 272
Query: 292 TAKALPKVMIPLSSIPTYNAAMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIW 351
+ +PKV+IP++SIPTYNAA+D+N L N+++KFPYPT +E+ L+ KY EEQ+KIW
Sbjct: 273 -SNLIPKVLIPVNSIPTYNAALDNNPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIW 331
Query: 352 FTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVASAGNVQHLIQAALP 411
F+AQRLK G+SW+PEE+E+AR+K FN + +VPQ TITV+ T + + + ++Q
Sbjct: 332 FSAQRLKHGVSWTPEEVEEARRKQFNGTVHTVPQ-TITVIPTHISTGSNGLPSILQTC-- 388
Query: 412 GHVVGQPEGTGGGLLVTQPLMANGLQATSSPLPLTVTSVPKQPGVAPINTVCSNTTSAVK 471
+VGQP GL++TQ N L T+ P+ LTV VP Q + + T+ K
Sbjct: 389 -QIVGQP-----GLVLTQVAGTNTLPVTA-PIALTVAGVPSQNNIQKSQVPAAQPTAETK 441
Query: 472 VVNAAQSLLTACPSITSQAFLDASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVT 531
AA + T+ D+ + KK+ EQL+ LK S+ +NQFP SE+ L K+T
Sbjct: 442 PATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKIT 501
Query: 532 GLSTREVRKWFSDRRYHCRNLKGSRAMIPGDHSS--IIIDSVPEVSFSPSSKVPEVTCIP 589
GL+ E++KWFSD RY+ RN K ++ + + SS IIIDS E + SP
Sbjct: 502 GLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIIIDSSDETTESP----------- 550
Query: 590 TTATLATHPSAKRQSWHQTPDFTPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSET 649
T+ T + +QSW+ PDFTP K+KE+ EQLR L++SF + + DEEL+RLR++T
Sbjct: 551 ---TVGT--AQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQT 605
Query: 650 KMTRREIDSWFSERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLASELRVSGENGSL 709
K+TRREID+WF+E K + A +EE+
Sbjct: 606 KLTRREIDAWFTE-----------KKKSKALKEEK------------------------- 629
Query: 710 EMPSSHILAERKVSPIKINLKNLRVTEANGRNEIPGLGACDPEDDESNKLAEQLPGKVSC 769
+ + E+N + G P D ES GK+ C
Sbjct: 630 ----------------------MEIDESNAGSSKEEAGETSPAD-ESGAPKSGSTGKI-C 665
Query: 770 KKTAQQRHLLRQLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYED 829
KKT +Q H+L+ FV+TQWPS ++YD + ++GL R ++V WFGD+RYA KNG LKWY
Sbjct: 666 KKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYY 725
Query: 830 YKRGNFP----------------------------------------PGLLVIAPGNREL 849
Y+ N P L+ G +
Sbjct: 726 YQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKTGTA-I 784
Query: 850 LQDYYMTHKMLYEEDLQNLCDKTQMSSQQVKQWFAEKM------------GEETRAVADT 897
L+DYY+ HK L E+DL L +K+ M +QV++WFAE+ EE V D
Sbjct: 785 LKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDEVIDD 844
Query: 898 GSEDQGPGTGELTAVHKGMGDTYSEVSENSESWEP 932
ED+ E +++S++WEP
Sbjct: 845 QEEDE-------------------EETDDSDTWEP 860
>gi|63079680 zinc fingers and homeoboxes 1 [Homo sapiens]
Length = 873
Score = 499 bits (1286), Expect = e-141
Identities = 340/995 (34%), Positives = 491/995 (49%), Gaps = 198/995 (19%)
Query: 1 MASKRKSTTPCMIPVKTVVLQDASMEAQPAETLPEGPQQDLPPEASAASSEAAQNP--SS 58
MAS+RKSTTPCM+ QD +E L EGP P E + A S ++ S
Sbjct: 1 MASRRKSTTPCMVLASE---QDPDLEL--ISDLDEGPPVLTPVENTRAESISSDEEVHES 55
Query: 59 TDGSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLA 118
D N ++G Y CKYC F++ D+ F H++SEH + + ++VC C+FL
Sbjct: 56 VDSD---NQQNKKVEGG-YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 111
Query: 119 KTPEGLSLHNATCHSGEASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADG--- 175
K + LS HN H GE +F + K +N + EQ+I + T E +AE A+
Sbjct: 112 KRYDALSEHNLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEV 171
Query: 176 -QAEIIITKTPIMKIMKGKAEAKKI---HTLKENVPSQPVGEALPKLSTGEMEVREGDHS 231
+ I I+KTPIMK+MK K E K+I H E+VP + E P E+ E S
Sbjct: 172 SSSGISISKTPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDRE----EIVENPSS 227
Query: 232 FINGAVPVSQASASSAKNPHAANGPLIGTVPVLPAGIAQFLSLQQQPPVHAQHHVHQPLP 291
+ S S S H + + T + G+AQ ++ V AQ +
Sbjct: 228 ----SASESNTSTSIVNRIHPSTASTVVTPAAVLPGLAQVITA-----VSAQQN------ 272
Query: 292 TAKALPKVMIPLSSIPTYNAAMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIW 351
+ +PKV+IP++SIPTYNAA+D+N L N+++KFPYPT +E+ L+ KY EEQ+KIW
Sbjct: 273 -SNLIPKVLIPVNSIPTYNAALDNNPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIW 331
Query: 352 FTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVASAGNVQHLIQAALP 411
F+AQRLK G+SW+PEE+E+AR+K FN + +VPQ TITV+ T + + + ++Q
Sbjct: 332 FSAQRLKHGVSWTPEEVEEARRKQFNGTVHTVPQ-TITVIPTHISTGSNGLPSILQTC-- 388
Query: 412 GHVVGQPEGTGGGLLVTQPLMANGLQATSSPLPLTVTSVPKQPGVAPINTVCSNTTSAVK 471
+VGQP GL++TQ N L T+ P+ LTV VP Q + + T+ K
Sbjct: 389 -QIVGQP-----GLVLTQVAGTNTLPVTA-PIALTVAGVPSQNNIQKSQVPAAQPTAETK 441
Query: 472 VVNAAQSLLTACPSITSQAFLDASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVT 531
AA + T+ D+ + KK+ EQL+ LK S+ +NQFP SE+ L K+T
Sbjct: 442 PATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKIT 501
Query: 532 GLSTREVRKWFSDRRYHCRNLKGSRAMIPGDHSS--IIIDSVPEVSFSPSSKVPEVTCIP 589
GL+ E++KWFSD RY+ RN K ++ + + SS IIIDS E + SP
Sbjct: 502 GLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIIIDSSDETTESP----------- 550
Query: 590 TTATLATHPSAKRQSWHQTPDFTPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSET 649
T+ T + +QSW+ PDFTP K+KE+ EQLR L++SF + + DEEL+RLR++T
Sbjct: 551 ---TVGT--AQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQT 605
Query: 650 KMTRREIDSWFSERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLASELRVSGENGSL 709
K+TRREID+WF+E K + A +EE+
Sbjct: 606 KLTRREIDAWFTE-----------KKKSKALKEEK------------------------- 629
Query: 710 EMPSSHILAERKVSPIKINLKNLRVTEANGRNEIPGLGACDPEDDESNKLAEQLPGKVSC 769
+ + E+N + G P D ES GK+ C
Sbjct: 630 ----------------------MEIDESNAGSSKEEAGETSPAD-ESGAPKSGSTGKI-C 665
Query: 770 KKTAQQRHLLRQLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYED 829
KKT +Q H+L+ FV+TQWPS ++YD + ++GL R ++V WFGD+RYA KNG LKWY
Sbjct: 666 KKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYY 725
Query: 830 YKRGNFP----------------------------------------PGLLVIAPGNREL 849
Y+ N P L+ G +
Sbjct: 726 YQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKTGTA-I 784
Query: 850 LQDYYMTHKMLYEEDLQNLCDKTQMSSQQVKQWFAEKM------------GEETRAVADT 897
L+DYY+ HK L E+DL L +K+ M +QV++WFAE+ EE V D
Sbjct: 785 LKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDEVIDD 844
Query: 898 GSEDQGPGTGELTAVHKGMGDTYSEVSENSESWEP 932
ED+ E +++S++WEP
Sbjct: 845 QEEDE-------------------EETDDSDTWEP 860
>gi|7662342 zinc fingers and homeoboxes 2 [Homo sapiens]
Length = 837
Score = 436 bits (1120), Expect = e-122
Identities = 316/965 (32%), Positives = 455/965 (47%), Gaps = 157/965 (16%)
Query: 1 MASKRKSTTPCMIPVKTVVLQDASMEAQPAETLPEG-PQQDLPPEASAASSEAAQNPSST 59
MASKRKSTTPCM+ VV QD E A+ G PQ D+ ++ AA E + +
Sbjct: 1 MASKRKSTTPCMVRTSQVVEQDVPEEVDRAKEKGIGTPQPDVAKDSWAAELENSSKENEV 60
Query: 60 -DGSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLA 118
+ ++ L G Y CKYC + + ++ +F H++ +H + +P +VC+ C+F
Sbjct: 61 IEVKSMGESQSKKLQGG-YECKYCPYSTQNLNEFTEHVDMQHPNVILNPLYVCAECNFTT 119
Query: 119 KTPEGLSLHNATCHSGEASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADGQAE 178
K + LS HN+ H GEA+F + K +N V+EQSI + + G D +
Sbjct: 120 KKYDSLSDHNSKFHPGEANFKLKLIKRNNQTVLEQSIETTNHVVSITTSGPGTG-DSDSG 178
Query: 179 IIITKTPIMKIMKGKAEAKKIHTLKENVPSQPVGEALPKLSTGEMEVREGDHSFINGAVP 238
I ++KTPIMK K KA+AKK+ E + + E +L T E+
Sbjct: 179 ISVSKTPIMKPGKPKADAKKVPKKPEEITPENHVEGTARLVTDTAEILS----------- 227
Query: 239 VSQASASSAKNPHAANGPLIGTVPVLPAGIAQFLSLQQQPPVHAQHHVHQPLPTAKALPK 298
+G V +L + + Q P P +PK
Sbjct: 228 ------------------RLGGVELLQDTLGHVMPSVQLP------------PNINLVPK 257
Query: 299 VMIPLSSIPTYNAAMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLK 358
V +PL++ YN+A+D+N+ + NSF+KFPYPT+AEL +LT +K+PEE ++IWF QRLK
Sbjct: 258 VPVPLNT-TKYNSALDTNATMINSFNKFPYPTQAELSWLTAASKHPEEHIRIWFATQRLK 316
Query: 359 QGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVASAGNVQHLIQAALPGHVVGQP 418
GISWSPEE+E+ARKKMFN IQSVP PTITVL L A Q ++Q ALP ++GQ
Sbjct: 317 HGISWSPEEVEEARKKMFNGTIQSVP-PTITVLPAQL-APTKVTQPILQTALPCQILGQT 374
Query: 419 EGTGGGLLVTQPLMANGLQATSSPLPLTVTSVPKQPGVAPINTVCSNTTSAVKVVNAAQS 478
LV + + + SP+ L V V P+ V K + AQ
Sbjct: 375 S------LVLTQVTSGSTTVSCSPITLAVAGVTNHGQKRPL--VTPQAAPEPKRPHIAQ- 425
Query: 479 LLTACPSITSQAFLDASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREV 538
+ P + + AS KK+ EQ++ LK SF ++QFP +EV L +VTGL+ E+
Sbjct: 426 VPEPPPKVANPPLTPAS--DRKKTKEQIAHLKASFLQSQFPDDAEVYRLIEVTGLARSEI 483
Query: 539 RKWFSDRRYHCRNLKGSRAMIPGDHSSIIIDSVPEVSFSPSSKVPEVTCIPTTATLATHP 598
+KWFSD RY C+ R ++ S+ D LA
Sbjct: 484 KKWFSDHRYRCQ-----RGIVHITSESLAKDQ-----------------------LAIAA 515
Query: 599 SAKRQSWHQTPDFTPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDS 658
S +++H PDF P K+KE+ Q++ LE SF ++ P ELDRLR ETK++RREIDS
Sbjct: 516 SRHGRTYHAYPDFAPQKFKEKTQGQVKILEDSFLKSSFPTQAELDRLRVETKLSRREIDS 575
Query: 659 WFSERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLASELRVSGENGSLEMPSSHILA 718
WFSERRK E+A D G + V NG+L
Sbjct: 576 WFSERRK-------------LRDSMEQAVLDSMGSGKKGQD--VGAPNGALS-------- 612
Query: 719 ERKVSPIKINLKNLRVTEANGRNEIPGLGACDPEDDESNKLAEQLPGKVSCKKTAQQRHL 778
R+ + +G L + P + K+ +Q HL
Sbjct: 613 --------------RLDQLSGAQLTSSLPSPSP----------------AIAKSQEQVHL 642
Query: 779 LRQLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRGNFPP- 837
LR F +TQWP+ Q+YD + A+TGL R E+VRWF ++R LK G +KW E Y+
Sbjct: 643 LRSTFARTQWPTPQEYDQLAAKTGLVRTEIVRWFKENRCLLKTGTVKWMEQYQHQPMADD 702
Query: 838 -GLLVIA----------PGN-RELLQDYYMTHKMLYEEDLQNLCDKTQMSSQQVKQWFAE 885
G +A P N +++ YY K L EEDL+ L + ++ S+ K
Sbjct: 703 HGYDAVARKATKPMAESPKNGGDVVPQYYKDPKKLCEEDLEKLVTRVKVGSEPAKDCLPA 762
Query: 886 KMGEETRAVADTGSED-QGPGTGELTAVHKGMGDTYSE---VSENSESWEPRVPEASSEP 941
K E T ++ S D QG E ++V + T E +S+ S+SW E SE
Sbjct: 763 KPSEATSDRSEGSSRDGQGSDENEESSVVDYVEVTVGEEDAISDRSDSWSQAAAEGVSEL 822
Query: 942 FDTSS 946
++ S
Sbjct: 823 AESDS 827
>gi|158631177 homeodomain leucine zipper protein [Homo sapiens]
Length = 550
Score = 103 bits (256), Expect = 1e-21
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 29/186 (15%)
Query: 741 NEIPGLGACDPEDDESNKLAEQLPGKVSCKKTAQQRHLLRQLFVQTQWPSNQDYDSIMAQ 800
N +PG P + S + Q K +KT +Q +L+ F+Q QW +DY +
Sbjct: 338 NSVPG--RVGPTEYLSPDMQRQRKTK---RKTKEQLAILKSFFLQCQWARREDYQKLEQI 392
Query: 801 TGLPRPEVVRWFGDSRYALKNGQLKWYED------------------------YKRGNFP 836
TGLPRPE+++WFGD+RYALK+GQLKW+ D +R P
Sbjct: 393 TGLPRPEIIQWFGDTRYALKHGQLKWFRDNAVPGAPSFQDPAIPTPPPSTRSLNERAETP 452
Query: 837 PGLLVIAPGNRELLQDYYMTHKMLYEEDLQNLCDKTQMSSQQVKQWFAEKMGEETRAVAD 896
P + P + + L+ Y+ H+ L E D+ L +++S+QQV WF ++ + V
Sbjct: 453 PLPIPPPPPDIQPLERYWAAHQQLRETDIPQLSQASRLSTQQVLDWFDSRLPQPAEVVVC 512
Query: 897 TGSEDQ 902
E++
Sbjct: 513 LDEEEE 518
Score = 70.9 bits (172), Expect = 6e-12
Identities = 91/392 (23%), Positives = 145/392 (36%), Gaps = 57/392 (14%)
Query: 313 MDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDAR 372
+DSN L +F FPYP+ A++ L + E++K WF AQRL+ GISWS EEIE+ R
Sbjct: 64 LDSNEHLLKTFSYFPYPSLADIALLCLRYGLQMEKVKTWFMAQRLRCGISWSSEEIEETR 123
Query: 373 KKMFNTVIQSVPQPTITVLNTPLVASAGNVQHLIQAALPGHVVGQPEGTGGGL---LVTQ 429
++ Q L+ + S + +P V PE G G+ +++
Sbjct: 124 ARVVYRRDQ---------LHFKSLLSFTHHAGRPPEEVPPPPVPAPEQVGIGIGPPTLSK 174
Query: 430 PLMANGLQATSSPLPLTVTSVPKQPGVAPINTVCSNTTSAVKVVNAAQSLLTACPSITSQ 489
P GL+ P++P P + + Q L + + S
Sbjct: 175 PTQTKGLKVE-----------PEEPSQMP------------PLPQSHQKLKESLMTPGSG 211
Query: 490 AFLDASIYKNKKSHEQLSALKGSFCRNQFP--GQSEVEHLTKVTGLSTREVRKWFSDRRY 547
AF S + LS + NQ G + H T V R+ +
Sbjct: 212 AFPYQSDFWQHLQSSGLSKEQAGRGPNQSHGIGTASWNHSTTVPQPQARDKPPPIALIAS 271
Query: 548 HCRNLKGSRAMIPGDHSSIIIDSVPEVSFSPSSKVPEVTCIPTTATLATH--PSAKRQSW 605
C+ S +S + + + S + + C+P + + + P +W
Sbjct: 272 SCKEESASSVTPSSSSTSSSFQVLANGATAASKPLQPLGCVPQSVSPSEQALPPHLEPAW 331
Query: 606 HQ-----------------TPDF-TPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRS 647
Q +PD K K + EQL L+S F Q E+ +L
Sbjct: 332 PQGLRHNSVPGRVGPTEYLSPDMQRQRKTKRKTKEQLAILKSFFLQCQWARREDYQKLEQ 391
Query: 648 ETKMTRREIDSWFSERRKKVNAEETKKAEENA 679
T + R EI WF + R + + K +NA
Sbjct: 392 ITGLPRPEIIQWFGDTRYALKHGQLKWFRDNA 423
Score = 59.7 bits (143), Expect = 1e-08
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 500 KKSHEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCRN--LKGSR- 556
+K+ EQL+ LK F + Q+ + + + L ++TGL E+ +WF D RY ++ LK R
Sbjct: 362 RKTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYALKHGQLKWFRD 421
Query: 557 AMIPGDHSSIIIDSVPEVSFSPSSKVPEVTCIPTTATLATHPSAKRQSWHQTPDFTPTKY 616
+PG +PS + P IPT P +S ++ + TP
Sbjct: 422 NAVPG---------------APSFQDP---AIPT-------PPPSTRSLNERAE-TPPLP 455
Query: 617 KERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEETKKAE 676
P ++ LE +A + + ++ +L ++++ +++ WF R + AE +
Sbjct: 456 IPPPPPDIQPLERYWAAHQQLRETDIPQLSQASRLSTQQVLDWFDSRLPQ-PAEVVVCLD 514
Query: 677 ENASQEEEEAAEDEGGEEDLASE 699
E +EEEE ED+ EE+ E
Sbjct: 515 EEEEEEEEELPEDDEEEEEEEEE 537
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 56.2 bits (134), Expect = 1e-07
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 32/201 (15%)
Query: 491 FLDASIYKNKKSH---EQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRY 547
FL S +K ++ +QL L+ F N P + +++ + + +GLS + ++ WF + +
Sbjct: 2078 FLRHSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLF 2137
Query: 548 HCRNLKGSRAMIPGDHSSIIIDSVPEVSFSPSSKVPEVTCIPTTATLATHPS----AKRQ 603
R DS S P + + ++ P +L + S +KR
Sbjct: 2138 KERQRNK--------------DSPYNFSNPPITVLEDIRIDPQPTSLEHYKSDASFSKRS 2183
Query: 604 SWHQTPDFTPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSER 663
S + D+ QLR L+ F N P D+E+++L + + R I WF
Sbjct: 2184 SRTRFTDY-----------QLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNA 2232
Query: 664 RKKVNAEETKKAEENASQEEE 684
R+K +AE +++ E
Sbjct: 2233 RQKARKSYENQAETKDNEKRE 2253
Score = 41.2 bits (95), Expect = 0.005
Identities = 36/143 (25%), Positives = 53/143 (37%), Gaps = 8/143 (5%)
Query: 77 YSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLAKTPEGLSLHNATCHSGEA 136
Y C YC++ S D ++ H+ S+H + P C C + L LH HS
Sbjct: 1172 YQCPYCNYNSRDQSRIQMHVLSQH---SVQPVICCPLCQDVLSNKMHLQLHLTHLHSVSP 1228
Query: 137 SFV----WNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADGQAEIIITKTPIMKIMKG 192
V V PD + +P + S P+A A+G + K M G
Sbjct: 1229 DCVEKLLMTVPVPDVMMPNSMLLPAAASEKSERDTPAAVTAEGSGKYSGESPMDDKSMAG 1288
Query: 193 KAEAKKIHTLKENVPSQPVGEAL 215
E K + +N +P E L
Sbjct: 1289 -LEDSKANVEVKNEEQKPTKEPL 1310
Score = 33.1 bits (74), Expect = 1.3
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 623 QLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEETKKAEENASQE 682
QL+ L++ F+ P +E + L +E + +R + WF R K KK + N
Sbjct: 2895 QLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAK-----EKKFKINIG-- 2947
Query: 683 EEEAAEDEGGEEDLASELRVSGENGSLEMP-SSHILAERKVSPIK 726
+ ++GG E E + G S + HI +++ +S ++
Sbjct: 2948 -KPFMINQGGTEGTKPECTLCGVKYSARLSIRDHIFSKQHISKVR 2991
Score = 30.4 bits (67), Expect = 8.2
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 504 EQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCRNLKGS-RAMIP 560
EQL L + + P + ++H+ + GL R V+ WF + R R KG RA+ P
Sbjct: 2570 EQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTR--ARERKGQFRAVGP 2625
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 48.9 bits (115), Expect = 2e-05
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 231 SFINGAVPVSQASASSAKNPHAANGPLIGTVPVLPAGIAQFLSLQQQPPVH---AQHHVH 287
S + GA P + A+A++A + A P +P+ P AQ+ L+ P V A
Sbjct: 54 SSVYGA-PYAAAAAAAAAQGYGAFLPYAAELPIFPQLGAQY-ELKDSPGVQHPAAAAAFP 111
Query: 288 QPLPTAKALPKVMIPLSSIPTYNAAMDSNSFLK---NSFHKFPYPTKAELCYLTVVTKYP 344
P P + S P NA +S S LK N K PYPTK E L ++TK
Sbjct: 112 HPHPAFYPYGQYQFGDPSRPK-NATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMT 170
Query: 345 EEQLKIWF--TAQRLKQ--GISWSPEEIED 370
Q+ WF +RLK+ ++W+P D
Sbjct: 171 LTQVSTWFANARRRLKKENKMTWAPRSRTD 200
Score = 44.3 bits (103), Expect = 6e-04
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 11/128 (8%)
Query: 589 PTTATLATHPSAKRQSWHQTPDFTPTKYKERAPEQ---LRALESSFAQNPLPLDEELDRL 645
P A HP + Q P++ K E L+A + +NP P E L
Sbjct: 104 PAAAAAFPHPHPAFYPYGQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIML 163
Query: 646 RSETKMTRREIDSWFSERRKKVNAE--------ETKKAEENASQEEEEAAEDEGGEEDLA 697
TKMT ++ +WF+ R+++ E E NA E E ++E EED
Sbjct: 164 AIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDGK 223
Query: 698 SELRVSGE 705
EL + E
Sbjct: 224 RELELEEE 231
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 48.1 bits (113), Expect = 4e-05
Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 21/187 (11%)
Query: 498 KNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCRNLKGSRA 557
+ + + +QL L+ F N P + +++ + +GL + ++ WF + + R
Sbjct: 2149 RTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQRNKDS- 2207
Query: 558 MIPGDHSSIIIDSVPEVSFSPSSKVPEVTCIPTTATLATHPSAKRQSWHQTPDFTPTKYK 617
P + S+ I S+ E+ PE + +KR S + D+
Sbjct: 2208 --PYNFSNPPITSLEELKIDSRPPSPE-------PPKQEYWGSKRSSRTRFTDY------ 2252
Query: 618 ERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEETKKAEE 677
QLR L+ F N P D+E ++L + + R I WF R+K + E
Sbjct: 2253 -----QLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQGEG 2307
Query: 678 NASQEEE 684
+ E
Sbjct: 2308 KDGERRE 2314
Score = 36.6 bits (83), Expect = 0.12
Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 25/170 (14%)
Query: 29 PAETLPEGPQQDLPPEASAASSEAAQ----NPSSTDGSTLANGHRSTLDG---------- 74
P+ET + + E A+SS+A + +P+++ + S L
Sbjct: 1159 PSETAADPEELAKDQEGGASSSQAEKELTDSPATSKRISFPGSSESPLSSKRPKTAEEIK 1218
Query: 75 --YLYSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLAKTPEGLSLHNATCH 132
+Y C YC + + D+ + H ++H + P C C + L LH H
Sbjct: 1219 PEQMYQCPYCKYSNADVNRLRVHAMTQH---SVQPMLRCPLCQDMLNNKIHLQLHLTHLH 1275
Query: 133 SGE----ASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADGQAE 178
S + V P+ +V+ S+ + PD G + E A Q E
Sbjct: 1276 SVAPDCVEKLIMTVTTPE--MVMPSSMFLPAAVPDRDGNSNLEEAGKQPE 1323
Score = 36.2 bits (82), Expect = 0.15
Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 37/176 (21%)
Query: 759 LAEQLPGKVSCKKTAQQRHLLRQLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWF------ 812
L +Q + + T Q +LRQ F PS + + ++GLP+ + WF
Sbjct: 2140 LLQQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFK 2199
Query: 813 -----GDSRYALKNGQLKWYEDYKRGNFPPGLLVIAPGNRE------------------L 849
DS Y N + E+ K + PP P +E +
Sbjct: 2200 ERQRNKDSPYNFSNPPITSLEELKIDSRPPS---PEPPKQEYWGSKRSSRTRFTDYQLRV 2256
Query: 850 LQDYYMTHKMLYEEDLQNLCDKTQMSSQQVKQWFAEKMGEETRAVADTGSEDQGPG 905
LQD++ + +++ + L + + ++ + WF + R A E+QG G
Sbjct: 2257 LQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWF-----QNARQKARKNYENQGEG 2307
Score = 31.2 bits (69), Expect = 4.8
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 662 ERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLASELRVSGENGSLEMPSS 714
E ++ EE + EE +EEEE EDEG + SEL E+ E P +
Sbjct: 461 EEAEEEEEEEEAEEEEEEEEEEEEEEEDEGCKGLFPSELDEELEDRPHEEPGA 513
Score = 30.8 bits (68), Expect = 6.3
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 632 AQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEETKKAEENASQEEEEAAEDEG 691
A +P E D +E + FSE+ + E ++ EE ++EEEE E+E
Sbjct: 424 ASSPTKSSEGKDSGAAEGEKQEVGDGDCFSEKVEPAEEEAEEEEEEEEAEEEEEEEEEEE 483
Query: 692 GEED 695
EE+
Sbjct: 484 EEEE 487
>gi|169881277 PROP paired-like homeobox 1 [Homo sapiens]
Length = 226
Score = 47.0 bits (110), Expect = 9e-05
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 505 QLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCRNLKGSRAMI----- 559
QL L+ +F RNQ+P E L + TGLS ++ WF +RR + K R+++
Sbjct: 80 QLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRR--AKQRKQERSLLQPLAH 137
Query: 560 --PGDHSSIIIDSVPEVSFSPSSKVPEVTCI--PTTATLATHPS--AKRQSWHQTPDFTP 613
P SS + +S +S ++ P VTC P + L + PS HQ+ D+ P
Sbjct: 138 LSPAAFSSFLPEST-ACPYSYAAPPPPVTCFPHPYSHALPSQPSTGGAFALSHQSEDWYP 196
Query: 614 T 614
T
Sbjct: 197 T 197
Score = 35.4 bits (80), Expect = 0.26
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 620 APEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEE 671
+P QL LES+F +N P + L +T ++ I WF RR K +E
Sbjct: 77 SPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQE 128
>gi|239749213 PREDICTED: mucin 3B, cell surface associated, partial
[Homo sapiens]
Length = 1063
Score = 47.0 bits (110), Expect = 9e-05
Identities = 124/632 (19%), Positives = 218/632 (34%), Gaps = 84/632 (13%)
Query: 32 TLPEGPQQDLPPEASAASSEAAQN---PSSTDGSTLANGHRSTLDGYLYSCKYCDFRSHD 88
T E PP S+ ++ + PS T T + + S D RSH
Sbjct: 85 TSTESTSHSTPPFTSSITTNETTSHSTPSFTTSITKTKTTSHSTPSFTSSNSITDSRSHS 144
Query: 89 MTQFVGHMNSEHTDFNKDPTFVCSGCSFLAKTPEGLSLHNATCHSGEASFVWNVAKPDNH 148
F + + + P+F+ S + + S ++T HS +S + P
Sbjct: 145 TPPFTSSVTTPEMTSHNTPSFMSSIITTETTSHSTPSFTSSTIHSTVSSSTTAITSP--F 202
Query: 149 VVVEQSIPESTSTPDLAGEPSAEGADGQAEIIITKTPI-MKIMKGKAEAKKIHTLKENVP 207
E + TSTP PS+ D + T TP+ + + ++ ++
Sbjct: 203 TTAETGV---TSTP---SSPSSLSTDIPTTSLRTLTPLSLSTSTSLTTTTDLPSIPTDIS 256
Query: 208 SQP----VGEALPKLSTGEMEVREGDHSFINGAVPVSQASASSAKN-PHAANGPLIGTVP 262
S P + + P + + E G S V +A+ S +N P ++ I P
Sbjct: 257 SLPTPIHIISSSPSIQSTETSSLVGTTSPTMSTV---RATLRSTENTPISSFSTSIVVTP 313
Query: 263 VLPAGIAQFLSLQQQPPV--HAQHHVHQPLPTAKALPKVMIPLSSIPTYNAAMDSNSFLK 320
P Q PPV A P+PT + S++ T + + +
Sbjct: 314 ETPT--------TQAPPVLMSATGTQTSPVPTTVTFGSMDSSTSTLHTLTPSTALSKIMS 365
Query: 321 NSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDARKKMFNTVI 380
S +FP P+ L P Q + T++ + + +A F+T+I
Sbjct: 366 TS--QFPIPS-THSSTLQTTPSIPSLQTSLTSTSEFTTESFTRGSTS-TNAILTSFSTII 421
Query: 381 QSVPQPTITVLNTPLVASAGNVQHLIQAALPGH-VVGQPEGTGGGLLVTQPLMANGLQAT 439
S PTI + ++P AS V ++P + E G + P +++ +
Sbjct: 422 WS-STPTIIMSSSPSSASITPVFATTIHSVPSSPYIFSTENVGSASITAFPSLSSSSTTS 480
Query: 440 SSP-------------------LP--------LTVTSVPKQP-----GVAPINTVCSNTT 467
+SP LP +T+T VP P + P S T
Sbjct: 481 TSPTSSSLTTALTEITPFSYISLPSTTPCPGTITITIVPASPTDPCVEMDPSTEATSPPT 540
Query: 468 SAVKVVNAAQSLLTACPSITSQAFLDASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHL 527
+ + V ++T SI+ Q L + + + E S++ + + G +
Sbjct: 541 TPLTVFPFTTEMVTCPSSISMQTTLATHMDTSSMTPESESSIIPNASSSTGTGTVPTNTV 600
Query: 528 TKVTGLSTREVRKWFSDRRYHCRNLKGSRAMIPGDHSSIIIDSVPEVSFSPSSKVPEVTC 587
T L T E W S+ L G + ++P ++ PSS +P +
Sbjct: 601 FTSTRLPTSET--WLSNNSVIPTPLPG-------------VSTIP-LTMKPSSSLPTILR 644
Query: 588 IPTTATLATHPSAKRQSWHQTPDFTPTKYKER 619
+ +T + P+A+ TPT R
Sbjct: 645 TSSKSTHPSPPTARTSETSVATTQTPTTLTTR 676
>gi|209954811 zinc finger protein 507 [Homo sapiens]
Length = 953
Score = 46.2 bits (108), Expect = 1e-04
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Query: 35 EGPQQDLPPEASAASSEAAQNPSST-DGSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFV 93
E Q LP S A+S + S T DG + G++S++ Y C CD+ S T +V
Sbjct: 716 EREQHSLPDTLSIATSNEPRISSDTADGKCVQEGNKSSVQKQ-YRCDVCDYTS---TTYV 771
Query: 94 GHMNSEHTDFNKDPTFVCSGCSFLAKTPEGLSLHNATCHSGEASFVWNVAKPDNHVVVEQ 153
G N N D + CS C ++ P L H H+ + ++ + + + Q
Sbjct: 772 GVRNHRRIH-NSDKPYRCSLCGYVCSHPPSLKSH-MWKHASDQNYNYEQVNKAINDAISQ 829
Query: 154 S---IPESTSTPDL-AGEPSAEGADGQAEIIITKTPIM 187
S + +S L + E SA+ G +E ++ + +M
Sbjct: 830 SGRVLGKSPGKTQLKSSEESADPVTGSSENAVSSSELM 867
>gi|55925468 zinc finger protein 507 [Homo sapiens]
Length = 953
Score = 46.2 bits (108), Expect = 1e-04
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Query: 35 EGPQQDLPPEASAASSEAAQNPSST-DGSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFV 93
E Q LP S A+S + S T DG + G++S++ Y C CD+ S T +V
Sbjct: 716 EREQHSLPDTLSIATSNEPRISSDTADGKCVQEGNKSSVQKQ-YRCDVCDYTS---TTYV 771
Query: 94 GHMNSEHTDFNKDPTFVCSGCSFLAKTPEGLSLHNATCHSGEASFVWNVAKPDNHVVVEQ 153
G N N D + CS C ++ P L H H+ + ++ + + + Q
Sbjct: 772 GVRNHRRIH-NSDKPYRCSLCGYVCSHPPSLKSH-MWKHASDQNYNYEQVNKAINDAISQ 829
Query: 154 S---IPESTSTPDL-AGEPSAEGADGQAEIIITKTPIM 187
S + +S L + E SA+ G +E ++ + +M
Sbjct: 830 SGRVLGKSPGKTQLKSSEESADPVTGSSENAVSSSELM 867
>gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens]
Length = 781
Score = 46.2 bits (108), Expect = 1e-04
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 507 SALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCRN 551
+ALK + +N++P +E HL K+TGLS +V WF +RR RN
Sbjct: 236 NALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRN 280
Score = 38.1 bits (87), Expect = 0.040
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 616 YKERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKK-VNAEETK- 673
+KE++ L+ L + QN P E L T ++ ++ +WF RR++ N ET+
Sbjct: 230 FKEKSRNALKEL---YKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQS 286
Query: 674 KAEENASQEEEEAAEDEGGEEDLASELRVSGENGSLEMP-SSHI--LAERKVSPIKINLK 730
K+E + + E+ E G EDL+ S +G + SSH+ + +++ KI+L
Sbjct: 287 KSESDGNPSTED--ESSKGHEDLSPHPLSSSSDGITNLSLSSHMEPVYMQQIGNAKISLS 344
Query: 731 N 731
+
Sbjct: 345 S 345
Score = 30.8 bits (68), Expect = 6.3
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 6/159 (3%)
Query: 315 SNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDARKK 374
S + LK + + YP+ AE +L +T Q+ WF +R + +P E + +
Sbjct: 234 SRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR---NPSETQSKSES 290
Query: 375 MFNTVIQSVPQPTITVLNT-PLVASAGNVQHLIQAALPGHVVGQPEGTGGGLLVTQPLMA 433
N + L+ PL +S+ + +L ++ V Q G L + ++
Sbjct: 291 DGNPSTEDESSKGHEDLSPHPLSSSSDGITNLSLSSHMEPVYMQQIGNAKISLSSSGVLL 350
Query: 434 NG--LQATSSPLPLTVTSVPKQPGVAPINTVCSNTTSAV 470
NG + A++SP+ L S + P +N + T AV
Sbjct: 351 NGSLVPASTSPVFLNGNSFIQGPSGVILNGLNVGNTQAV 389
>gi|42544241 iroquois homeobox protein 6 [Homo sapiens]
Length = 446
Score = 45.4 bits (106), Expect = 2e-04
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 624 LRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEETKK-AEENASQE 682
L+A + +NP P E L TKMT ++ +WF+ R+++ E A +N E
Sbjct: 161 LKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGE 220
Query: 683 EEEAAEDEGGEEDLASELRVSGENGSLEMPSSHILAERKVSPIKI-NLKNLRVTEANGR- 740
E +A EGGEED G L + + A ++ +++ +L++L E
Sbjct: 221 ERKA---EGGEED---------SLGCLTADTKEVTASQEARGLRLSDLEDLEEEEEEEEE 268
Query: 741 -NEIPGLGACDPEDDESNKLAEQLPGKVSCKKTAQQRH----LLRQLFVQTQWPSNQDYD 795
+ + E K A+ LPG + + + L F +++ D
Sbjct: 269 AEDEEVVATAGDRLTEFRKGAQSLPGPCAAAREGRLERRECGLAAPRFSFNDPSGSEEAD 328
Query: 796 SIMAQTGLPR 805
+ A+TG PR
Sbjct: 329 FLSAETGSPR 338
Score = 40.4 bits (93), Expect = 0.008
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 310 NAAMDSNSFLK---NSFHKFPYPTKAELCYLTVVTKYPEEQLKIWF--TAQRLKQ--GIS 362
NA ++ S LK N K PYPTK E L ++TK Q+ WF +RLK+ ++
Sbjct: 152 NATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 211
Query: 363 WSPE 366
W+P+
Sbjct: 212 WAPK 215
>gi|22218349 diencephalon/mesencephalon homeobox 1 isoform b [Homo
sapiens]
Length = 382
Score = 45.4 bits (106), Expect = 2e-04
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Query: 622 EQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEE-TKKAEENAS 680
+QL ALE +F + P +RL T + + WF RR K ++ + + E+
Sbjct: 81 QQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQK 140
Query: 681 QEEEEAAEDEGGEEDLASELRVSGENGSLEMPSSHILAERKVSPIKINLKNLRVTEANGR 740
Q+E E + EG E + ++ E +P S AE +S + + + R
Sbjct: 141 QKEAEGSHGEGKAEAPTPDTQLDTEQPP-RLPGSDPPAELHLSLSEQSASESAPEDQPDR 199
Query: 741 NEIPGLGACDPEDDES 756
E P GA DP+ ++S
Sbjct: 200 EEDPRAGAEDPKAEKS 215
Score = 31.2 bits (69), Expect = 4.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 504 EQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCRNLKGS 555
+QL AL+ +F + +P E L T L V+ WF +RR R + S
Sbjct: 81 QQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRS 132
>gi|27436936 diencephalon/mesencephalon homeobox 1 isoform a [Homo
sapiens]
Length = 377
Score = 45.4 bits (106), Expect = 2e-04
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Query: 622 EQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEE-TKKAEENAS 680
+QL ALE +F + P +RL T + + WF RR K ++ + + E+
Sbjct: 76 QQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQK 135
Query: 681 QEEEEAAEDEGGEEDLASELRVSGENGSLEMPSSHILAERKVSPIKINLKNLRVTEANGR 740
Q+E E + EG E + ++ E +P S AE +S + + + R
Sbjct: 136 QKEAEGSHGEGKAEAPTPDTQLDTEQPP-RLPGSDPPAELHLSLSEQSASESAPEDQPDR 194
Query: 741 NEIPGLGACDPEDDES 756
E P GA DP+ ++S
Sbjct: 195 EEDPRAGAEDPKAEKS 210
Score = 31.2 bits (69), Expect = 4.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 504 EQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCRNLKGS 555
+QL AL+ +F + +P E L T L V+ WF +RR R + S
Sbjct: 76 QQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRS 127
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 43.9 bits (102), Expect = 7e-04
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 572 PEVSFSPSSKVPEVTCIPTTATLATHPSAKRQSWHQTPDFTPTKYKERAPEQLRALESSF 631
P V SP + + C P ++ KR+ H P F+ +Q+ ALE +F
Sbjct: 206 PGVMQSPPWRDARLACTPHQGSILLDKDGKRK--HTRPTFSG--------QQIFALEKTF 255
Query: 632 AQNPLPLDEELDRLRSETKMTRREIDSWFSERR---KKVNAEE---TKKAEENASQEEEE 685
Q E RL MT ++ WF RR +K +A E KK +++ ++ +
Sbjct: 256 EQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKG 315
Query: 686 AAEDEGGEED 695
A+E+E ++D
Sbjct: 316 ASENEEEDDD 325
>gi|197100900 iroquois homeobox 2 [Homo sapiens]
Length = 471
Score = 43.1 bits (100), Expect = 0.001
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 591 TATLATHPSAKRQSWHQTPDFTPTKYKER-APEQLRALESSFAQNPLPLDEELDRLRSET 649
T ++ HP +Q D K R A L+A + +NP P E L T
Sbjct: 95 TGAISYHPYGSAAYPYQLNDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIIT 154
Query: 650 KMTRREIDSWFSERRKKVNAEETKK-AEENASQEEEEAAEDEGGEEDLASELRVSGENGS 708
KMT ++ +WF+ R+++ E A N S++E+E D +D + + G S
Sbjct: 155 KMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDEDEDEGDATRSKDESPDKAQEGTETS 214
Query: 709 LE 710
E
Sbjct: 215 AE 216
Score = 40.8 bits (94), Expect = 0.006
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 307 PTY--NAAMDSNSFLK---NSFHKFPYPTKAELCYLTVVTKYPEEQLKIWF--TAQRLKQ 359
P Y NA D+ + LK N K PYPTK E L ++TK Q+ WF +RLK+
Sbjct: 115 PAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 174
Query: 360 --GISWSP 365
++W+P
Sbjct: 175 ENKMTWAP 182
>gi|39930475 iroquois homeobox 2 [Homo sapiens]
Length = 471
Score = 43.1 bits (100), Expect = 0.001
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 591 TATLATHPSAKRQSWHQTPDFTPTKYKER-APEQLRALESSFAQNPLPLDEELDRLRSET 649
T ++ HP +Q D K R A L+A + +NP P E L T
Sbjct: 95 TGAISYHPYGSAAYPYQLNDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIIT 154
Query: 650 KMTRREIDSWFSERRKKVNAEETKK-AEENASQEEEEAAEDEGGEEDLASELRVSGENGS 708
KMT ++ +WF+ R+++ E A N S++E+E D +D + + G S
Sbjct: 155 KMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDEDEDEGDATRSKDESPDKAQEGTETS 214
Query: 709 LE 710
E
Sbjct: 215 AE 216
Score = 40.8 bits (94), Expect = 0.006
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 307 PTY--NAAMDSNSFLK---NSFHKFPYPTKAELCYLTVVTKYPEEQLKIWF--TAQRLKQ 359
P Y NA D+ + LK N K PYPTK E L ++TK Q+ WF +RLK+
Sbjct: 115 PAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 174
Query: 360 --GISWSP 365
++W+P
Sbjct: 175 ENKMTWAP 182
>gi|7705555 iroquois homeobox 4 [Homo sapiens]
Length = 519
Score = 42.7 bits (99), Expect = 0.002
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 624 LRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAE-------ETKKAE 676
L+A +NP P E L TKMT ++ +WF+ R+++ E K A+
Sbjct: 157 LKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCAD 216
Query: 677 EN---ASQEEEEAAEDEGGEEDLAS 698
E A EEEE E+E EE L S
Sbjct: 217 EKRPYAEGEEEEGGEEEAREEPLKS 241
Score = 37.0 bits (84), Expect = 0.088
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 310 NAAMDSNSFLK---NSFHKFPYPTKAELCYLTVVTKYPEEQLKIWF--TAQRLKQ--GIS 362
NA ++ S LK K PYPTK E L ++TK Q+ WF +RLK+ ++
Sbjct: 148 NATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 207
Query: 363 WSP 365
W P
Sbjct: 208 WPP 210
>gi|5174681 SIX homeobox 1 [Homo sapiens]
Length = 284
Score = 42.0 bits (97), Expect = 0.003
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 616 YKERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEETKKA 675
+KE++ LR +A NP P E L T +T ++ +WF RR++ A E K+
Sbjct: 131 FKEKSRGVLREW---YAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKER 187
Query: 676 E-----ENASQEEEEAAEDEGGEEDLAS 698
E ++S ++ + + EGG+ ++S
Sbjct: 188 ENTENNNSSSNKQNQLSPLEGGKPLMSS 215
Score = 35.0 bits (79), Expect = 0.33
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 509 LKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCR 550
L+ + N +P E L + TGL+T +V WF +RR R
Sbjct: 139 LREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 180
Score = 30.4 bits (67), Expect = 8.2
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 774 QQRHLLRQLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRG 833
+ R +LR+ + +PS ++ + TGL +V WF + R + + K E+ +
Sbjct: 134 KSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENTENN 193
Query: 834 N 834
N
Sbjct: 194 N 194
>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
sapiens]
Length = 796
Score = 42.0 bits (97), Expect = 0.003
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 601 KRQSWHQTPDFTPTKYKERAPEQLRALESSFAQ-----NPLPLDEELDRLRSETKMTRRE 655
K +S PDF T+ KE + AL +Q LDE+++++R + K +E
Sbjct: 76 KNRSADFNPDFVFTE-KEGTYDGSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKE 134
Query: 656 IDSWFSERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLAS 698
S E+ K+ K +E+ + +EE +EDE E D +S
Sbjct: 135 AKSGKLEKEKEAKEGSEPKEQEDLQENDEEGSEDEASETDYSS 177
>gi|116256475 zinc finger protein 827 [Homo sapiens]
Length = 1077
Score = 41.6 bits (96), Expect = 0.004
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 13/103 (12%)
Query: 75 YLYSCKYCDFRSHDMTQFVGHMNSEHTDFNKDP-TFVCSGCSFLAKTPEGLSLHNATCHS 133
Y YSC C F + QFV HM S H D + + C+ C F+ + H T H+
Sbjct: 895 YYYSCHVCGFETELNVQFVSHM-SLHVDKEQWMFSICCTACDFVTMEEAEIKTHIGTKHT 953
Query: 134 GEASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEP-SAEGADG 175
GE D E + P S+S L+ S + +DG
Sbjct: 954 GE----------DRKTPSESNSPSSSSLSALSDSANSKDDSDG 986
Score = 32.7 bits (73), Expect = 1.7
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 15/92 (16%)
Query: 77 YSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLAKTPEGLSLHNATCHSGEA 136
+ C C FR HM H ++ TF C C F + L LH CH
Sbjct: 402 HQCPLCPFRCARKDNLKSHMKV-HQHQDRGETFQCQLCPFTSSRHFSLKLH-MRCHQ--- 456
Query: 137 SFVWNVAKPDNHVVVEQSIPESTSTPDLAGEP 168
F+ AK V++ IP+ PD+ G P
Sbjct: 457 HFLRTEAK------VKEEIPD----PDVKGSP 478
>gi|219275578 SIX homeobox 2 [Homo sapiens]
Length = 291
Score = 41.2 bits (95), Expect = 0.005
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 616 YKERAPEQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEETKKA 675
+KE++ LR +A NP P E L T +T ++ +WF RR++ A E K+
Sbjct: 131 FKEKSRSVLREW---YAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKER 187
Query: 676 EEN 678
E N
Sbjct: 188 ENN 190
Score = 36.6 bits (83), Expect = 0.12
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 507 SALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCR 550
S L+ + N +P E L + TGL+T +V WF +RR R
Sbjct: 137 SVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 180
Score = 30.8 bits (68), Expect = 6.3
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 774 QQRHLLRQLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRG 833
+ R +LR+ + +PS ++ + TGL +V WF + R + + K E+ +
Sbjct: 134 KSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENNENS 193
Query: 834 N 834
N
Sbjct: 194 N 194
>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
Length = 480
Score = 40.8 bits (94), Expect = 0.006
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 310 NAAMDSNSFLK---NSFHKFPYPTKAELCYLTVVTKYPEEQLKIWF--TAQRLKQ--GIS 362
NA +S S LK N K PYPTK E L ++TK Q+ WF +RLK+ ++
Sbjct: 133 NATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 192
Query: 363 WSPEEIEDARKKMFNTVIQSVPQ 385
W + +F + + P+
Sbjct: 193 WGARSKDQEDGALFGSDTEGDPE 215
Score = 38.5 bits (88), Expect = 0.030
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 8/131 (6%)
Query: 592 ATLATHPSAKRQSWHQTPDFTPTKYKERAPEQ---LRALESSFAQNPLPLDEELDRLRSE 648
AT A H + + Q P + K E L+A + +NP P E L
Sbjct: 107 ATFAAHTAPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAII 166
Query: 649 TKMTRREIDSWFSERRKKVNAEETKKAEENASQEEEEAA----EDEGGEEDLASELRVSG 704
TKMT ++ +WF+ R+++ +E K S+++E+ A + EG E + +
Sbjct: 167 TKMTLTQVSTWFANARRRLK-KENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDL 225
Query: 705 ENGSLEMPSSH 715
E+ ++ H
Sbjct: 226 ESIDIDKIDEH 236
>gi|24308179 CTTNBP2 N-terminal like [Homo sapiens]
Length = 639
Score = 40.8 bits (94), Expect = 0.006
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 615 KYKERAPEQLRALESS---FAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVN--A 669
K +ER +QL +S F + L +L+ RS K + E +K N A
Sbjct: 138 KERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSML---VLECKKATNKAA 194
Query: 670 EETKKAEENASQEEEEAAEDEGGEEDLASE-LRVSGENGSLEMPSSHILAERKVSPIKIN 728
EE +KA E + + E+E + EE+LA+E R +E S ER+ K+N
Sbjct: 195 EEGQKAGELSLKLEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLN 254
Query: 729 LKNLRVTEANGRNEIPGLGACDPEDDESNKLA---EQLPGKVSCKK-TAQQRHLLRQLFV 784
+ R + E+ L + + S++ + EQL V+ K TA + +L +F
Sbjct: 255 REENRTKTL--KEEMESLKKIVKDLEASHQHSSPNEQLKKPVTVSKGTATEPLMLMSVFC 312
Query: 785 QTQ-WPSNQDYDSIMAQ---TGLPRPEVVRWFGDSRYALKNG 822
QT+ +P+ + + S +A+ TGLP P + YA NG
Sbjct: 313 QTESFPAERTHGSNIAKMTNTGLPGPATPAY----SYAKTNG 350
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 40.8 bits (94), Expect = 0.006
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 307 PTY--NAAMDSNSFLK---NSFHKFPYPTKAELCYLTVVTKYPEEQLKIWF--TAQRLKQ 359
P Y NA D+ + LK N K PYPTK E L ++TK Q+ WF +RLK+
Sbjct: 114 PAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK 173
Query: 360 --GISWSP 365
++W+P
Sbjct: 174 ENKMTWTP 181
Score = 39.3 bits (90), Expect = 0.018
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 593 TLATHPSAKRQSWHQTPDFTPTKYKER-APEQLRALESSFAQNPLPLDEELDRLRSETKM 651
+L HP A + D K R A L+A + +NP P E L TKM
Sbjct: 96 SLGYHPYAAPLGSYPYGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKM 155
Query: 652 TRREIDSWFSERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLASELRVSGENGSLEM 711
T ++ +WF+ R+++ E E+EE E+ E++ E + + G E
Sbjct: 156 TLTQVSTWFANARRRLKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDKGDPEG 215
Query: 712 PSS 714
P +
Sbjct: 216 PEA 218
>gi|15375314 LIM homeobox protein 4 [Homo sapiens]
Length = 390
Score = 40.8 bits (94), Expect = 0.006
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 26/114 (22%)
Query: 622 EQLRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNA------------ 669
+QL L++++ +P P ++L SET + R + WF RR K
Sbjct: 167 KQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRWGQ 226
Query: 670 --EETKKAEENASQEEEEAAEDEG--------GEEDLASEL----RVSGENGSL 709
+ K++ ++ QE+E +AED G E+ + SEL R+ G G +
Sbjct: 227 FYKSVKRSRGSSKQEKESSAEDCGVSDSELSFREDQILSELGHTNRIYGNVGDV 280
Score = 35.0 bits (79), Expect = 0.33
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 504 EQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTREVRKWFSDRRYHCRNLK 553
+QL LK ++ + P + E L+ TGL R V+ WF +RR + LK
Sbjct: 167 KQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLK 216
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 40.0 bits (92), Expect = 0.010
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 13/150 (8%)
Query: 319 LKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISW-SPEEIEDARKKMFN 377
L+ +F K YP L PE ++++WF +R K W E++E + K+ +
Sbjct: 151 LERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAK----WRRQEKLEVSSMKLQD 206
Query: 378 TVIQSVPQPTITVLNTPLVASAGNVQHLIQAALPGHVVGQPEGTGGGLLVTQPLMANGLQ 437
+ + S + + +PL A G+ ALP P GGG Q L G
Sbjct: 207 SPLLSFSRSPPSATLSPLGAGPGSGGGPAGGALPLESWLGPPLPGGGATALQSLPGFGPP 266
Query: 438 ATSSPLPLT--------VTSVPKQPGVAPI 459
A S P T + S P PG+ P+
Sbjct: 267 AQSLPASYTPPPPPPPFLNSPPLGPGLQPL 296
>gi|46359075 zinc finger protein 423 [Homo sapiens]
Length = 1284
Score = 40.0 bits (92), Expect = 0.010
Identities = 40/176 (22%), Positives = 58/176 (32%), Gaps = 30/176 (17%)
Query: 77 YSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPT-----FVCSGCSFLAKTPEGLSLH--NA 129
+ C YC D+ H+ H N +P+ F C+ CS T L+ H A
Sbjct: 480 FHCNYCPEMFADINSLQEHIRVSHCGPNANPSDGNNAFFCNQCSMGFLTESSLTEHIQQA 539
Query: 130 TCHSGEASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADGQAEIIITKTPIMKI 189
C G A V +P + S P T++P I+K+
Sbjct: 540 HCSVGSAKLESPVVQPTQSFMEVYSCPYCTNSPIFGS-------------------ILKL 580
Query: 190 MKGKAEAKK----IHTLKENVPSQPVGEALPKLSTGEMEVREGDHSFINGAVPVSQ 241
K E K H+ K PV + S + +S NG P +Q
Sbjct: 581 TKHIKENHKNIPLAHSKKSKAEQSPVSSDVEVSSPKRQRLSASANSISNGEYPCNQ 636
Score = 33.9 bits (76), Expect = 0.75
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 45 ASAASSEAAQNPSST--DGSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFVGHMNSEHTD 102
AS+ SS+ +P+ DG L G G Y C++CD +S ++ H+D
Sbjct: 104 ASSPSSKDVASPTQMIGDGCDLGLGEEEGGTGLPYPCQFCD-KSFIRLSYLKRHEQIHSD 162
Query: 103 FNKDPTFVCSGCSFLAKTPEG----LSLHNAT----CHSGEASF 138
K P F C+ CS L K + LH CH EA+F
Sbjct: 163 --KLP-FKCTYCSRLFKHKRSRDRHIKLHTGDKKYHCHECEAAF 203
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,171,233
Number of Sequences: 37866
Number of extensions: 2028790
Number of successful extensions: 13509
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 322
Number of HSP's that attempted gapping in prelim test: 10265
Number of HSP's gapped (non-prelim): 2739
length of query: 956
length of database: 18,247,518
effective HSP length: 112
effective length of query: 844
effective length of database: 14,006,526
effective search space: 11821507944
effective search space used: 11821507944
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.