SIX1 32010

Name: SIX1	Sequence: fasta or formatted (284aa)		NCBI GI: 5174681
Description: SIX homeobox 1		Referenced in: Homeobox and Related Proteins Additional Genes in Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 16 2 C cysteine 1.4 4 1 D aspartate 2.1 6 1 E glutamate 8.1 23 3 F phenylalanine 3.5 10 1 G glycine 6.7 19 2 H histidine 4.2 12 1 I isoleucine 0.7 2 1 K lysine 5.6 16 1 L leucine 12.0 34 3 M methionine 1.4 4 1 N asparagine 5.6 16 3 P proline 6.3 18 2 Q glutamine 6.7 19 2 R arginine 7.0 20 2 S serine 10.2 29 3 T threonine 3.9 11 3 V valine 4.6 13 2 W tryptophan 1.8 5 1 Y tyrosine 2.5 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SIX homeobox 1 SIX2 0.732 SIX homeobox 2 SIX3 0.455 sine oculis homeobox homolog 3 SIX6 0.455 SIX homeobox 6 SIX4 0.443 sine oculis homeobox homolog 4 SIX5 0.354 sine oculis homeobox homolog 5 PBX2 0.050 pre-B-cell leukemia homeobox 2 PBX4 0.048 pre-B-cell leukemia homeobox 4 PBX1 0.046 pre-B-cell leukemia homeobox 1 LOC100291517 0.046 PREDICTED: hypothetical protein XP_002347726 LOC100289629 0.046 PREDICTED: hypothetical protein XP_002344158 TGIF2LX 0.046 TGFB-induced factor homeobox 2-like, X-linked MEIS3 0.046 Meis1, myeloid ecotropic viral integration site 1 ho... MEIS3 0.045 Meis1, myeloid ecotropic viral integration site 1 ho... MEIS1 0.045 Meis homeobox 1 TGIF1 0.045 TG-interacting factor isoform a TGIF1 0.045 TG-interacting factor isoform c TGIF1 0.045 TG-interacting factor isoform d TGIF1 0.045 TG-interacting factor isoform d TGIF1 0.045 TG-interacting factor isoform d TGIF1 0.045 TG-interacting factor isoform d TGIF1 0.045 TG-interacting factor isoform c TGIF1 0.045 TG-interacting factor isoform b MEIS2 0.045 Meis homeobox 2 isoform h MEIS2 0.045 Meis homeobox 2 isoform g MEIS2 0.045 Meis homeobox 2 isoform a MEIS2 0.045 Meis homeobox 2 isoform d MEIS2 0.045 Meis homeobox 2 isoform c MEIS2 0.045 Meis homeobox 2 isoform b MEIS2 0.045 Meis homeobox 2 isoform f Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.