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Search of human proteins with 28603842
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28603842 tetratricopeptide repeat domain 9C [Homo sapiens]
(171 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28603842 tetratricopeptide repeat domain 9C [Homo sapiens] 350 3e-97
gi|46275820 tetratricopeptide repeat domain 9B [Homo sapiens] 159 1e-39
gi|150456465 tetratricopeptide repeat domain 9 [Homo sapiens] 157 4e-39
gi|206725544 FK506 binding protein 6 isoform b [Homo sapiens] 66 1e-11
gi|146229346 FK506 binding protein 6 isoform a [Homo sapiens] 66 1e-11
gi|4503729 FK506 binding protein 52 [Homo sapiens] 59 2e-09
gi|52630440 FK506-binding protein 8 [Homo sapiens] 57 1e-08
gi|224809329 FK506 binding protein 5 isoform 1 [Homo sapiens] 55 4e-08
gi|224809327 FK506 binding protein 5 isoform 1 [Homo sapiens] 55 4e-08
gi|4758384 FK506 binding protein 5 isoform 1 [Homo sapiens] 55 4e-08
gi|4826932 peptidylprolyl isomerase D [Homo sapiens] 53 1e-07
gi|89179321 smooth muscle cell associated protein-1 isoform 3 [H... 51 4e-07
gi|29725607 smooth muscle cell associated protein-1 isoform 2 [H... 51 4e-07
gi|201860300 aryl hydrocarbon receptor interacting protein [Homo... 50 7e-07
gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled... 47 6e-06
gi|74272280 aryl hydrocarbon receptor interacting protein-like 1... 44 9e-05
gi|74272278 aryl hydrocarbon receptor interacting protein-like 1... 44 9e-05
gi|74272276 aryl hydrocarbon receptor interacting protein-like 1... 44 9e-05
gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens] 43 2e-04
gi|27262638 sperm associated antigen 1 [Homo sapiens] 42 2e-04
gi|27262636 sperm associated antigen 1 [Homo sapiens] 42 2e-04
gi|75750484 cardiomyopathy associated 4 isoform 2 [Homo sapiens] 41 6e-04
gi|27477061 cardiomyopathy associated 4 isoform 1 [Homo sapiens] 41 6e-04
gi|4507711 tetratricopeptide repeat domain 1 [Homo sapiens] 39 0.003
gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sap... 38 0.004
gi|54607135 translocase of outer mitochondrial membrane 70 homol... 38 0.005
gi|21361356 translocase of outer mitochondrial membrane 34 [Homo... 38 0.005
gi|225735593 RNA polymerase II associated protein 3 isoform 2 [H... 37 0.006
gi|225735591 RNA polymerase II associated protein 3 isoform 1 [H... 37 0.006
gi|157739945 tetratricopeptide repeat, ankyrin repeat and coiled... 37 0.006
>gi|28603842 tetratricopeptide repeat domain 9C [Homo sapiens]
Length = 171
Score = 350 bits (898), Expect = 3e-97
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALT 60
MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALT
Sbjct: 1 MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALT 60
Query: 61 PEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFH 120
PEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFH
Sbjct: 61 PEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFH 120
Query: 121 LQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMFG 171
LQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMFG
Sbjct: 121 LQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMFG 171
>gi|46275820 tetratricopeptide repeat domain 9B [Homo sapiens]
Length = 239
Score = 159 bits (402), Expect = 1e-39
Identities = 82/162 (50%), Positives = 111/162 (68%), Gaps = 6/162 (3%)
Query: 1 MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGP-----Q 55
++ L+ A +K EG + YRE K+R+A+ +YHRALLQL+ + PS LP P
Sbjct: 58 LDSSLRAAVAFKAEGQRCYREKKFREAIGKYHRALLQLKAAQGARPSGLPAPAPGPTSSP 117
Query: 56 GPA-LTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRA 114
GPA L+ EQ ++ +T+ +CY++L ACLLQ E VNYERVREY KVLE+Q N KA YRA
Sbjct: 118 GPARLSEEQRRLVESTEVECYDSLTACLLQSELVNYERVREYCLKVLEKQQGNFKATYRA 177
Query: 115 GVAFFHLQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELS 156
G+AF+HL DY +A YL A +R+P D NV RY+QLTQ +++
Sbjct: 178 GIAFYHLGDYARALRYLQEARSREPTDTNVLRYIQLTQLKMN 219
>gi|150456465 tetratricopeptide repeat domain 9 [Homo sapiens]
Length = 222
Score = 157 bits (397), Expect = 4e-39
Identities = 80/167 (47%), Positives = 113/167 (67%), Gaps = 7/167 (4%)
Query: 5 LQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPA------ 58
++ A +K +G Q Y++ K+R+A+ +YHRALL+L+GL P + P PA
Sbjct: 54 IRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPG 113
Query: 59 -LTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVA 117
L+ EQ + + DCYN+LAACLLQ E VNYERV+EY KVL+++ +N KALYR+GVA
Sbjct: 114 RLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVA 173
Query: 118 FFHLQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQ 164
F+HL DYD+A +YL A +QP D NV RY+QLT+ +LS ++EK+
Sbjct: 174 FYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKE 220
>gi|206725544 FK506 binding protein 6 isoform b [Homo sapiens]
Length = 322
Score = 66.2 bits (160), Expect = 1e-11
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 1 MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALT 60
++K L+ A +E GN +R+ ++ DA RY RALL LR +
Sbjct: 159 LQKVLKVAATEREFGNYLFRQNRFYDAKVRYKRALLLLRRR----------------SAP 202
Query: 61 PEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFH 120
PE+++++ + NL+ L+++ Y ++ L NAKAL+R G A
Sbjct: 203 PEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC--YGEQALIIDQKNAKALFRCGQACLL 260
Query: 121 LQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMF 170
L +Y +AR +L+ A QP + ++ L+ S Y KEK+++ MF
Sbjct: 261 LTEYQKARDFLVRAQKEQPFNHDINNELKKLASCYRDYVDKEKEMWHRMF 310
>gi|146229346 FK506 binding protein 6 isoform a [Homo sapiens]
Length = 327
Score = 66.2 bits (160), Expect = 1e-11
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 1 MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALT 60
++K L+ A +E GN +R+ ++ DA RY RALL LR +
Sbjct: 164 LQKVLKVAATEREFGNYLFRQNRFYDAKVRYKRALLLLRRR----------------SAP 207
Query: 61 PEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFH 120
PE+++++ + NL+ L+++ Y ++ L NAKAL+R G A
Sbjct: 208 PEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC--YGEQALIIDQKNAKALFRCGQACLL 265
Query: 121 LQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMF 170
L +Y +AR +L+ A QP + ++ L+ S Y KEK+++ MF
Sbjct: 266 LTEYQKARDFLVRAQKEQPFNHDINNELKKLASCYRDYVDKEKEMWHRMF 315
>gi|4503729 FK506 binding protein 52 [Homo sapiens]
Length = 459
Score = 59.3 bits (142), Expect = 2e-09
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 2 EKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTP 61
E++L+++ + KE G ++EGKY+ A+ +Y + + L + +
Sbjct: 264 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLE---------------YESSFSN 308
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
E+ + + NLA C L+++ + E K LE +N K L+R G A +
Sbjct: 309 EEAQKAQALRLASHLNLAMCHLKLQA--FSAAIESCNKALELDSNNEKGLFRRGEAHLAV 366
Query: 122 QDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMF 170
D++ AR + P + + L + Q + +EK+LY MF
Sbjct: 367 NDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 415
>gi|52630440 FK506-binding protein 8 [Homo sapiens]
Length = 413
Score = 56.6 bits (135), Expect = 1e-08
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 2 EKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTP 61
++R+ A +E GN Y+ + A + Y L ++ + S + T
Sbjct: 216 QERVALANRKRECGNAHYQRADFVLAANSYD---LAIKAITSSAKVDM----------TF 262
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
E+E L + C NNLAA L+++ +Y VLE QPDN KAL+R G
Sbjct: 263 EEEAQLLQLKVKCLNNLAASQLKLD--HYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQ 320
Query: 122 QDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMFG 171
+Y +A L AA+ +P + + L + ++ E LY M G
Sbjct: 321 GEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTETALYRKMLG 370
>gi|224809329 FK506 binding protein 5 isoform 1 [Homo sapiens]
Length = 457
Score = 54.7 bits (130), Expect = 4e-08
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 2 EKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTP 61
+++L++A + KE+G ++ GKY AV +Y + + L L+
Sbjct: 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLE---------------MEYGLSE 306
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
++ + + NLA C L++ Y + E K L N K LYR G A +
Sbjct: 307 KESKASESFLLAAFLNLAMCYLKLR--EYTKAVECCDKALGLDSANEKGLYRRGEAQLLM 364
Query: 122 QDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMF 170
+++ A+ + P++ R + + Q + ++ +++++Y MF
Sbjct: 365 NEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMF 413
>gi|224809327 FK506 binding protein 5 isoform 1 [Homo sapiens]
Length = 457
Score = 54.7 bits (130), Expect = 4e-08
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 2 EKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTP 61
+++L++A + KE+G ++ GKY AV +Y + + L L+
Sbjct: 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLE---------------MEYGLSE 306
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
++ + + NLA C L++ Y + E K L N K LYR G A +
Sbjct: 307 KESKASESFLLAAFLNLAMCYLKLR--EYTKAVECCDKALGLDSANEKGLYRRGEAQLLM 364
Query: 122 QDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMF 170
+++ A+ + P++ R + + Q + ++ +++++Y MF
Sbjct: 365 NEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMF 413
>gi|4758384 FK506 binding protein 5 isoform 1 [Homo sapiens]
Length = 457
Score = 54.7 bits (130), Expect = 4e-08
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 2 EKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTP 61
+++L++A + KE+G ++ GKY AV +Y + + L L+
Sbjct: 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLE---------------MEYGLSE 306
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
++ + + NLA C L++ Y + E K L N K LYR G A +
Sbjct: 307 KESKASESFLLAAFLNLAMCYLKLR--EYTKAVECCDKALGLDSANEKGLYRRGEAQLLM 364
Query: 122 QDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMF 170
+++ A+ + P++ R + + Q + ++ +++++Y MF
Sbjct: 365 NEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMF 413
>gi|4826932 peptidylprolyl isomerase D [Homo sapiens]
Length = 370
Score = 53.1 bits (126), Expect = 1e-07
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 74 CYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQARHYLLA 133
C N+ AC L+M N++ + + LE P N KALYR + L++YDQA L
Sbjct: 275 CVLNIGACKLKMS--NWQGAIDSCLEALELDPSNTKALYRRAQGWQGLKEYDQALADLKK 332
Query: 134 AVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMF 170
A P+D ++ L + ++ + KEK +Y MF
Sbjct: 333 AQGIAPEDKAIQAELLKVKQKIKAQKDKEKAVYAKMF 369
>gi|89179321 smooth muscle cell associated protein-1 isoform 3 [Homo
sapiens]
Length = 929
Score = 51.2 bits (121), Expect = 4e-07
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 36/162 (22%)
Query: 12 KEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQ 71
++EGN+ ++ G Y A++ Y +AL GLD TP+ + +LH
Sbjct: 10 RKEGNELFKCGDYGGALAAYTQAL----GLDA----------------TPQDQAVLH--- 46
Query: 72 TDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQARHYL 131
N AAC L++E +Y++ + K +E+ + KALYR A L DQA L
Sbjct: 47 ----RNRAACHLKLE--DYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDL 100
Query: 132 LAAVNRQPKD-------ANVRRYLQLTQSELSSYHRKEKQLY 166
V+ +PK+ N+ +Q +SS K +Q++
Sbjct: 101 QRCVSLEPKNKVFQEALRNIGGQIQEKVRYMSSTDAKVEQMF 142
>gi|29725607 smooth muscle cell associated protein-1 isoform 2 [Homo
sapiens]
Length = 944
Score = 51.2 bits (121), Expect = 4e-07
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 36/162 (22%)
Query: 12 KEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQ 71
++EGN+ ++ G Y A++ Y +AL GLD TP+ + +LH
Sbjct: 25 RKEGNELFKCGDYGGALAAYTQAL----GLDA----------------TPQDQAVLH--- 61
Query: 72 TDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQARHYL 131
N AAC L++E +Y++ + K +E+ + KALYR A L DQA L
Sbjct: 62 ----RNRAACHLKLE--DYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDL 115
Query: 132 LAAVNRQPKD-------ANVRRYLQLTQSELSSYHRKEKQLY 166
V+ +PK+ N+ +Q +SS K +Q++
Sbjct: 116 QRCVSLEPKNKVFQEALRNIGGQIQEKVRYMSSTDAKVEQMF 157
>gi|201860300 aryl hydrocarbon receptor interacting protein [Homo
sapiens]
Length = 330
Score = 50.4 bits (119), Expect = 7e-07
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 2 EKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTP 61
E++ + L +EGN+ YREG ++A ++Y+ A+ L+ L P +TP
Sbjct: 173 EEKAKAVPLIHQEGNRLYREGHVKEAAAKYYDAIACLKNLQMKEQPGSPEWIQLDQQITP 232
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
N C L +E Y V ++ +L + DN KA ++ G A +
Sbjct: 233 ------------LLLNYCQCKLVVE--EYYEVLDHCSSILNKYDDNVKAYFKRGKAHAAV 278
Query: 122 QDYDQARHYLLAAVNRQPKDAN-VRRYLQLTQSELSSYHRKEKQLYLGMF 170
+ +A+ + P A V R LQ ++ + ++K + G+F
Sbjct: 279 WNAQEAQADFAKVLELDPALAPVVSRELQALEARIRQKDEEDKARFRGIF 328
>gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled-coil
containing 1 isoform 1 [Homo sapiens]
Length = 1861
Score = 47.4 bits (111), Expect = 6e-06
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 19/160 (11%)
Query: 9 QLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILH 68
Q EEGN Y++GK ++A RY AL + P G E +
Sbjct: 1290 QKLMEEGNVMYKKGKMKEAAQRYQYALRKF---------PREGFG--------EDMRPFN 1332
Query: 69 TTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQAR 128
+ Y NL+ C + + ++ E++ K LE +P + +A Y A + + + A
Sbjct: 1333 ELRVSLYLNLSRC--RRKTNDFGMAEEFASKALELKPKSYEAFYARARAKRNSRQFVAAL 1390
Query: 129 HYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLG 168
L AV P + V+R L + E R ++Q G
Sbjct: 1391 ADLQEAVKLCPTNQEVKRLLARVEEECKQLQRSQQQKQQG 1430
>gi|74272280 aryl hydrocarbon receptor interacting protein-like 1
isoform 3 [Homo sapiens]
Length = 324
Score = 43.5 bits (101), Expect = 9e-05
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 3 KRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLD-PSLPSPLPNLGPQGPALTP 61
++++ + EGN+ ++ G+Y +A S+Y A++ LR L P + L
Sbjct: 113 EKMKAVPVLHGEGNRLFKLGRYEEASSKYQEAIICLRNLQTKEKPWEVQWL--------- 163
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
+ E +++T N CLL+ E Y V E++ +L P KA Y A +
Sbjct: 164 KLEKMINT----LILNYCQCLLKKE--EYYEVLEHTSDILRHHPGIVKAYYVRARAHAEV 217
Query: 122 QDYDQARHYLLAAVNRQPK-DANVRRYLQLTQSELSSYHRKEK 163
+ +A+ L + +P VRR L+L ++ ++ +E+
Sbjct: 218 WNEAEAKADLQKVLELEPSMQKAVRRELRLLENRMAEKQEEER 260
>gi|74272278 aryl hydrocarbon receptor interacting protein-like 1
isoform 2 [Homo sapiens]
Length = 321
Score = 43.5 bits (101), Expect = 9e-05
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 3 KRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLD-PSLPSPLPNLGPQGPALTP 61
++++ + EGN+ ++ G+Y +A S+Y A++ LR L P + L
Sbjct: 110 EKMKAVPVLHGEGNRLFKLGRYEEASSKYQEAIICLRNLQTKEKPWEVQWL--------- 160
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
+ E +++T N CLL+ E Y V E++ +L P KA Y A +
Sbjct: 161 KLEKMINT----LILNYCQCLLKKE--EYYEVLEHTSDILRHHPGIVKAYYVRARAHAEV 214
Query: 122 QDYDQARHYLLAAVNRQPK-DANVRRYLQLTQSELSSYHRKEK 163
+ +A+ L + +P VRR L+L ++ ++ +E+
Sbjct: 215 WNEAEAKADLQKVLELEPSMQKAVRRELRLLENRMAEKQEEER 257
>gi|74272276 aryl hydrocarbon receptor interacting protein-like 1
isoform 1 [Homo sapiens]
Length = 384
Score = 43.5 bits (101), Expect = 9e-05
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 3 KRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLD-PSLPSPLPNLGPQGPALTP 61
++++ + EGN+ ++ G+Y +A S+Y A++ LR L P + L
Sbjct: 173 EKMKAVPVLHGEGNRLFKLGRYEEASSKYQEAIICLRNLQTKEKPWEVQWL--------- 223
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
+ E +++T N CLL+ E Y V E++ +L P KA Y A +
Sbjct: 224 KLEKMINT----LILNYCQCLLKKE--EYYEVLEHTSDILRHHPGIVKAYYVRARAHAEV 277
Query: 122 QDYDQARHYLLAAVNRQPK-DANVRRYLQLTQSELSSYHRKEK 163
+ +A+ L + +P VRR L+L ++ ++ +E+
Sbjct: 278 WNEAEAKADLQKVLELEPSMQKAVRRELRLLENRMAEKQEEER 320
>gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens]
Length = 349
Score = 42.7 bits (99), Expect = 2e-04
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 26/131 (19%)
Query: 12 KEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQ 71
+ G + +R G A Y RAL L L P P + +LH
Sbjct: 214 RARGTELFRAGNPEGAARCYGRALRLLLTLPPP---------------GPPERTVLHA-- 256
Query: 72 TDCYNNLAAC-LLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQARHY 130
NLAAC LL +P + + +VLER+P + KALYR GVA L + ++A
Sbjct: 257 -----NLAACQLLLGQP---QLAAQSCDRVLEREPGHLKALYRRGVAQAALGNLEKATAD 308
Query: 131 LLAAVNRQPKD 141
L + PK+
Sbjct: 309 LKKVLAIDPKN 319
>gi|27262638 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 42.4 bits (98), Expect = 2e-04
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 12 KEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQ 71
KE+GN+ + G Y +AV Y R++ S LP +
Sbjct: 213 KEKGNEAFNSGDYEEAVMYYTRSI-----------SALPTVV------------------ 243
Query: 72 TDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQARHYL 131
YNN A ++++ N+ + +KVLE +P N KAL R + H +A L
Sbjct: 244 --AYNNRAQAEIKLQ--NWNSAFQDCEKVLELEPGNVKALLRRATTYKHQNKLREATEDL 299
Query: 132 LAAVNRQPKDANVRRYLQLTQSELSS 157
++ +P + ++ L + +L +
Sbjct: 300 SKVLDVEPDNDLAKKTLSEVERDLKN 325
Score = 37.7 bits (86), Expect = 0.005
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 32/116 (27%)
Query: 12 KEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQ 71
KEEGNQ + Y+DA+S+Y L ++ +
Sbjct: 627 KEEGNQCVNDKNYKDALSKYSECLK------------------------------INNKE 656
Query: 72 TDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQA 127
Y N A C L++ +E ++ + L+ N KA YR +A L++Y ++
Sbjct: 657 CAIYTNRALCYLKL--CQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNYQKS 710
Score = 35.4 bits (80), Expect = 0.024
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 24/116 (20%)
Query: 12 KEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQ 71
K +GN+ +R G++ +A +Y A+ L P G + + +IL++ +
Sbjct: 449 KSQGNELFRSGQFAEAAGKYSAAIALLE--------------PAGSEIA-DDLSILYSNR 493
Query: 72 TDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQA 127
CY C ++ N + LE P + K L R +A+ L+ Y +A
Sbjct: 494 AACYLKEGNCSGCIQDCN---------RALELHPFSMKPLLRRAMAYETLEQYGKA 540
>gi|27262636 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 42.4 bits (98), Expect = 2e-04
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 12 KEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQ 71
KE+GN+ + G Y +AV Y R++ S LP +
Sbjct: 213 KEKGNEAFNSGDYEEAVMYYTRSI-----------SALPTVV------------------ 243
Query: 72 TDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQARHYL 131
YNN A ++++ N+ + +KVLE +P N KAL R + H +A L
Sbjct: 244 --AYNNRAQAEIKLQ--NWNSAFQDCEKVLELEPGNVKALLRRATTYKHQNKLREATEDL 299
Query: 132 LAAVNRQPKDANVRRYLQLTQSELSS 157
++ +P + ++ L + +L +
Sbjct: 300 SKVLDVEPDNDLAKKTLSEVERDLKN 325
Score = 37.7 bits (86), Expect = 0.005
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 32/116 (27%)
Query: 12 KEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQ 71
KEEGNQ + Y+DA+S+Y L ++ +
Sbjct: 627 KEEGNQCVNDKNYKDALSKYSECLK------------------------------INNKE 656
Query: 72 TDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQA 127
Y N A C L++ +E ++ + L+ N KA YR +A L++Y ++
Sbjct: 657 CAIYTNRALCYLKL--CQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNYQKS 710
Score = 35.4 bits (80), Expect = 0.024
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 24/116 (20%)
Query: 12 KEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQ 71
K +GN+ +R G++ +A +Y A+ L P G + + +IL++ +
Sbjct: 449 KSQGNELFRSGQFAEAAGKYSAAIALLE--------------PAGSEIA-DDLSILYSNR 493
Query: 72 TDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQA 127
CY C ++ N + LE P + K L R +A+ L+ Y +A
Sbjct: 494 AACYLKEGNCSGCIQDCN---------RALELHPFSMKPLLRRAMAYETLEQYGKA 540
>gi|75750484 cardiomyopathy associated 4 isoform 2 [Homo sapiens]
Length = 929
Score = 40.8 bits (94), Expect = 6e-04
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 29/143 (20%)
Query: 7 EAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENI 66
EA KEEGN+ ++ Y+ A + Y +AL + D +L + L
Sbjct: 5 EAVQLKEEGNRHFQLQDYKAATNSYSQALKLTK--DKALLATL----------------- 45
Query: 67 LHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQ 126
Y N AAC L+ E +Y + + + ++ + KALYR A HL DQ
Sbjct: 46 --------YRNRAACGLKTE--SYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQ 95
Query: 127 ARHYLLAAVNRQPKDANVRRYLQ 149
A + +P++ N + L+
Sbjct: 96 AFKDVQRCATLEPRNQNFQEMLR 118
>gi|27477061 cardiomyopathy associated 4 isoform 1 [Homo sapiens]
Length = 931
Score = 40.8 bits (94), Expect = 6e-04
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 29/143 (20%)
Query: 7 EAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENI 66
EA KEEGN+ ++ Y+ A + Y +AL + D +L + L
Sbjct: 5 EAVQLKEEGNRHFQLQDYKAATNSYSQALKLTK--DKALLATL----------------- 45
Query: 67 LHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQ 126
Y N AAC L+ E +Y + + + ++ + KALYR A HL DQ
Sbjct: 46 --------YRNRAACGLKTE--SYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQ 95
Query: 127 ARHYLLAAVNRQPKDANVRRYLQ 149
A + +P++ N + L+
Sbjct: 96 AFKDVQRCATLEPRNQNFQEMLR 118
>gi|4507711 tetratricopeptide repeat domain 1 [Homo sapiens]
Length = 292
Score = 38.5 bits (88), Expect = 0.003
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 27/167 (16%)
Query: 2 EKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTP 61
+KR +E+ KEEGN+++++G Y +A S Y RAL P+
Sbjct: 110 QKRREESTRLKEEGNEQFKKGDYIEAESSYSRAL------------------EMCPSCFQ 151
Query: 62 EQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHL 121
++ +IL ++N AA +M+ E K ++ P +A+ R +
Sbjct: 152 KERSIL-------FSNRAAA--RMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKT 202
Query: 122 QDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLG 168
D+A + + + P R ++ + + K+ LG
Sbjct: 203 DKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERNERLKEEMLG 249
>gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo
sapiens]
Length = 504
Score = 38.1 bits (87), Expect = 0.004
Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 28/167 (16%)
Query: 3 KRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPE 62
K++++ E + R+G+Y DA S+Y + +PS+
Sbjct: 263 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKT----EPSIAE----------YTVRS 308
Query: 63 QENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQ 122
+E I H D +PV RV +VL+ +PDN AL A+ +
Sbjct: 309 KERICHCFSKD-----------EKPVEAIRV---CSEVLQMEPDNVNALKDRAEAYLIEE 354
Query: 123 DYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGM 169
YD+A A D +R L+ Q L +++ LG+
Sbjct: 355 MYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGV 401
>gi|54607135 translocase of outer mitochondrial membrane 70 homolog
A [Homo sapiens]
Length = 608
Score = 37.7 bits (86), Expect = 0.005
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 27/113 (23%)
Query: 5 LQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQE 64
L AQ K +GN+ ++ GKY A+ Y A+ +L P ++
Sbjct: 111 LDRAQAAKNKGNKYFKAGKYEQAIQCYTEAI----------------------SLCPTEK 148
Query: 65 NILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVA 117
N+ +T Y N AA Q++ ++ V + K +E P KAL+R A
Sbjct: 149 NVDLST---FYQNRAAAFEQLQ--KWKEVAQDCTKAVELNPKYVKALFRRAKA 196
>gi|21361356 translocase of outer mitochondrial membrane 34 [Homo
sapiens]
Length = 309
Score = 37.7 bits (86), Expect = 0.005
Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 32/151 (21%)
Query: 5 LQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQE 64
+++A++ KEEGN+ ++G ++ A+ +Y +LL
Sbjct: 190 VEKARVLKEEGNELVKKGNHKKAIEKYSESLL---------------------------- 221
Query: 65 NILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDY 124
++ Y+N A C L ++ Y + + L+ N KA YR A L+DY
Sbjct: 222 --CSNLESATYSNRALCYLVLK--QYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDY 277
Query: 125 DQARHYLLAAVNRQPKDANVRRYLQLTQSEL 155
+ + + +P++ ++ Q + L
Sbjct: 278 KSSFADISNLLQIEPRNGPAQKLRQEVKQNL 308
Score = 33.9 bits (76), Expect = 0.070
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 15 GNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQTDC 74
GN+ +R G+Y +A + Y RAL L+ S PE+E++L
Sbjct: 16 GNESFRNGQYAEASALYGRALRVLQAQGSS---------------DPEEESVL------- 53
Query: 75 YNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQA 127
Y+N AAC ++ N + L P + K L R A+ L+ Y A
Sbjct: 54 YSNRAAC--HLKDGNCRDCIKDCTSALALVPFSIKPLLRRASAYEALEKYPMA 104
>gi|225735593 RNA polymerase II associated protein 3 isoform 2 [Homo
sapiens]
Length = 631
Score = 37.4 bits (85), Expect = 0.006
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 22/169 (13%)
Query: 6 QEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQEN 65
Q+A + KE+GN+ +++GKY +A+ Y +G+D +P+ P A +
Sbjct: 131 QKALVLKEKGNKYFKQGKYDEAIDCY------TKGMDADPYNPVL---PTNRASAYFRLK 181
Query: 66 ILHTTQTDCYNNLAACLLQMEPVNYER---VREYSQKVLERQPDNAKALYRAGVAFFHLQ 122
++DC NLA L + Y R R QK+ E + D + L F
Sbjct: 182 KFAVAESDC--NLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATN 239
Query: 123 DYDQARHYLLAAVNRQPKDANV--------RRYLQLTQSELSSYHRKEK 163
+ + L + N PK+A++ R+ ++ Q++ + K++
Sbjct: 240 ELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDR 288
Score = 28.1 bits (61), Expect = 3.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 2 EKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRAL 35
++ Q+A K+ GN ++EGKY A+ Y R +
Sbjct: 276 QQNKQQAISEKDRGNGFFKEGKYERAIECYTRGI 309
>gi|225735591 RNA polymerase II associated protein 3 isoform 1 [Homo
sapiens]
Length = 665
Score = 37.4 bits (85), Expect = 0.006
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 22/169 (13%)
Query: 6 QEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQEN 65
Q+A + KE+GN+ +++GKY +A+ Y +G+D +P+ P A +
Sbjct: 131 QKALVLKEKGNKYFKQGKYDEAIDCY------TKGMDADPYNPVL---PTNRASAYFRLK 181
Query: 66 ILHTTQTDCYNNLAACLLQMEPVNYER---VREYSQKVLERQPDNAKALYRAGVAFFHLQ 122
++DC NLA L + Y R R QK+ E + D + L F
Sbjct: 182 KFAVAESDC--NLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATN 239
Query: 123 DYDQARHYLLAAVNRQPKDANV--------RRYLQLTQSELSSYHRKEK 163
+ + L + N PK+A++ R+ ++ Q++ + K++
Sbjct: 240 ELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDR 288
Score = 28.1 bits (61), Expect = 3.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 2 EKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRAL 35
++ Q+A K+ GN ++EGKY A+ Y R +
Sbjct: 276 QQNKQQAISEKDRGNGFFKEGKYERAIECYTRGI 309
>gi|157739945 tetratricopeptide repeat, ankyrin repeat and coiled-coil
containing 2 [Homo sapiens]
Length = 1990
Score = 37.4 bits (85), Expect = 0.006
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 13 EEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALTPEQENILHTTQT 72
EEG+ Y++GK ++A RY AL + P G E +
Sbjct: 1249 EEGDMFYKKGKVKEAAQRYQYALKKF---------PREGFG--------EDLKTFRELKV 1291
Query: 73 DCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQARHYLL 132
NL+ C +M ++ E++ K LE +P + +A Y A + + A L
Sbjct: 1292 SLLLNLSRCRRKMN--DFGMAEEFATKALELKPKSYEAYYARARAKRSSRQFAAALEDLN 1349
Query: 133 AAVNRQPKDANVRRYLQLTQSE 154
A+ P + ++R L + E
Sbjct: 1350 EAIKLCPNNREIQRLLLRVEEE 1371
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,934,311
Number of Sequences: 37866
Number of extensions: 319765
Number of successful extensions: 1703
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1559
Number of HSP's gapped (non-prelim): 147
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.