Guide to the Human Genome
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Name: FKBP6 Sequence: fasta or formatted (322aa) NCBI GI: 206725544
Description:

FK506 binding protein 6 isoform b

Referenced in:

Peptidylprolyl Isomerases
Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [327aa] FK506 binding protein 6 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         26           2
 C cysteine            2.5          8           1
 D aspartate           6.2         20           1
 E glutamate           6.8         22           2
 F phenylalanine       5.0         16           1
 G glycine             5.6         18           1
 H histidine           1.2          4           1
 I isoleucine          2.8          9           2
 K lysine              6.2         20           2
 L leucine            14.0         45           4
 M methionine          2.8          9           1
 N asparagine          3.4         11           2
 P proline             5.6         18           2
 Q glutamine           4.3         14           2
 R arginine            7.5         24           3
 S serine              5.6         18           2
 T threonine           3.1         10           2
 V valine              4.0         13           1
 W tryptophan          0.9          3           1
 Y tyrosine            4.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 6 isoform b 
FKBP6                 0.956   FK506 binding protein 6 isoform a 
FKBP4                 0.108   FK506 binding protein 52 
FKBP5                 0.090   FK506 binding protein 5 isoform 2 
FKBP5                 0.090   FK506 binding protein 5 isoform 1 
FKBP5                 0.090   FK506 binding protein 5 isoform 1 
FKBP5                 0.090   FK506 binding protein 5 isoform 1 
TTC9C                 0.065   tetratricopeptide repeat domain 9C 
FKBP8                 0.065   FK506-binding protein 8 
FKBP1A                0.062   FK506 binding protein 1A, 12kDa 
FKBP1A                0.062   FK506 binding protein 1A, 12kDa 
FKBP1B                0.059   FK506 binding protein 1B, 12.6 kDa isoform a 
FKBP10                0.048   FK506 binding protein 10 
PPID                  0.046   peptidylprolyl isomerase D 
FKBP2                 0.046   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.046   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.046   FK506 binding protein 2, 13kDa precursor 
FKBP3                 0.038   FK506 binding protein 3, 25kDa 
FKBP11                0.033   FK506 binding protein 11 isoform 1 precursor 
FKBP7                 0.033   FK506 binding protein 7 isoform b precursor 
FKBP9                 0.032   FK506 binding protein 9 
FKBP7                 0.027   FK506 binding protein 7 isoform a precursor 
TTC12                 0.024   tetratricopeptide repeat domain 12 
FKBPL                 0.022   WAF-1/CIP1 stabilizing protein 39 
AIP                   0.021   aryl hydrocarbon receptor interacting protein [Homo...
FKBP11                0.021   FK506 binding protein 11 isoform 3 precursor 
RPAP3                 0.019   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.019   RNA polymerase II associated protein 3 isoform 1 [H...
TTC9                  0.017   tetratricopeptide repeat domain 9 
TTC9B                 0.016   tetratricopeptide repeat domain 9B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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