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Search of human proteins with 28372499
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28372499 myosin light chain, phosphorylatable, fast skeletal
muscle [Homo sapiens]
(169 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28372499 myosin light chain, phosphorylatable, fast skeletal ... 342 7e-95
gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo s... 254 2e-68
gi|34147532 myosin, light chain 10, regulatory [Homo sapiens] 238 2e-63
gi|10864037 myosin light chain 2a [Homo sapiens] 210 5e-55
gi|4505305 myosin regulatory light chain 5 [Homo sapiens] 208 2e-54
gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric [... 182 1e-46
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo... 181 3e-46
gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo... 181 3e-46
gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo ... 181 3e-46
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi... 178 2e-45
gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo... 176 1e-44
gi|88981341 PREDICTED: similar to myosin regulatory light chain ... 157 3e-39
gi|51464364 PREDICTED: similar to myosin regulatory light chain ... 157 3e-39
gi|169167243 PREDICTED: similar to myosin regulatory light chain... 154 3e-38
gi|58218968 calmodulin 3 [Homo sapiens] 81 4e-16
gi|4502549 calmodulin 2 [Homo sapiens] 81 4e-16
gi|5901912 calmodulin 1 [Homo sapiens] 81 4e-16
gi|31563524 myosin regulatory light chain 9 isoform b [Homo sapi... 80 6e-16
gi|4885111 calmodulin-like 3 [Homo sapiens] 80 8e-16
gi|4757902 caltractin [Homo sapiens] 64 6e-11
gi|46397403 centrin 3 [Homo sapiens] 63 1e-10
gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens] 60 7e-10
gi|4757974 centrin 1 [Homo sapiens] 59 2e-09
gi|4505303 smooth muscle and non-muscle myosin alkali light chai... 59 2e-09
gi|88999583 myosin, light chain 6, alkali, smooth muscle and non... 59 2e-09
gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo sap... 58 4e-09
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 55 2e-08
gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f... 55 2e-08
gi|17986258 myosin, light chain 6, alkali, smooth muscle and non... 55 2e-08
gi|4557777 slow skeletal ventricular myosin alkali light chain 3... 55 3e-08
>gi|28372499 myosin light chain, phosphorylatable, fast skeletal
muscle [Homo sapiens]
Length = 169
Score = 342 bits (878), Expect = 7e-95
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRL 60
MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRL
Sbjct: 1 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRL 60
Query: 61 NVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFL 120
NVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFL
Sbjct: 61 NVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFL 120
Query: 121 EELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
EELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE
Sbjct: 121 EELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
>gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo
sapiens]
Length = 166
Score = 254 bits (649), Expect = 2e-68
Identities = 120/167 (71%), Positives = 145/167 (86%), Gaps = 1/167 (0%)
Query: 1 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRL 60
MAPK+AK+R G +S+VFSMF+QTQIQEFKEAFT++DQNRDG IDK DLRDTFAA+GR+
Sbjct: 1 MAPKKAKKRA-GGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRV 59
Query: 61 NVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFL 120
NVKNEE+D M+KEA GPINFTVFLTMFGEKLKGADPE+ I AFKV DPEGKG +K ++
Sbjct: 60 NVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYV 119
Query: 121 EELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKD 167
E+LTTQ +RFS+EE+ M+AAFPPDV GN+DYKN+ ++ITHG+ KD
Sbjct: 120 REMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD 166
>gi|34147532 myosin, light chain 10, regulatory [Homo sapiens]
Length = 226
Score = 238 bits (606), Expect = 2e-63
Identities = 121/200 (60%), Positives = 143/200 (71%), Gaps = 34/200 (17%)
Query: 2 APKRAKRRTVEGGSSSVFSMFDQTQIQEFKE----------------------------- 32
AP+RA++R SS+VFSMFDQ+QIQEFKE
Sbjct: 27 APRRARKRAEGTASSNVFSMFDQSQIQEFKESLALSPRLERNGMISAHCNLCLTGSSNSP 86
Query: 33 -----AFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEASGPINFTVFLTMF 87
AFT++DQNRDG IDKEDLRDTFAA+GR+NVKNEEL+AM+KEA GPINFTVFLTMF
Sbjct: 87 ASASQAFTIMDQNRDGFIDKEDLRDTFAALGRINVKNEELEAMVKEAPGPINFTVFLTMF 146
Query: 88 GEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDV 147
GEKLKG DPE+ I AFKV D EGKG +K ++E L TQ DRFS+EE+K M+AAFPPDV
Sbjct: 147 GEKLKGTDPEETILHAFKVFDTEGKGFVKADVIKEKLMTQADRFSEEEVKQMFAAFPPDV 206
Query: 148 GGNVDYKNICYVITHGDAKD 167
GN+DY+N+CYVITHG+ KD
Sbjct: 207 CGNLDYRNLCYVITHGEEKD 226
>gi|10864037 myosin light chain 2a [Homo sapiens]
Length = 175
Score = 210 bits (534), Expect = 5e-55
Identities = 96/165 (58%), Positives = 128/165 (77%)
Query: 4 KRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVK 63
K A + + GSS+VFSMF+Q QIQEFKEAF+ IDQNRDGII K DLR+T++ +G+++V
Sbjct: 11 KVAATKQAQRGSSNVFSMFEQAQIQEFKEAFSCIDQNRDGIICKADLRETYSQLGKVSVP 70
Query: 64 NEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEEL 123
EELDAM++E GPINFTVFLT+FGEKL G DPE+ I AF++ DP GKG + K ++L
Sbjct: 71 EEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKGVVNKDEFKQL 130
Query: 124 LTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQ 168
L TQ D+FS E++ M+A P D+ GN+DYK++CY+ITHGD K++
Sbjct: 131 LLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE 175
>gi|4505305 myosin regulatory light chain 5 [Homo sapiens]
Length = 173
Score = 208 bits (529), Expect = 2e-54
Identities = 101/175 (57%), Positives = 136/175 (77%), Gaps = 9/175 (5%)
Query: 1 MAPKRAKRRTVEGG-------SSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDT 53
MA ++ K++ EGG SS+VFS F+QTQIQEFKEAFT++DQNRDG IDKEDL+DT
Sbjct: 1 MASRKTKKK--EGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDT 58
Query: 54 FAAMGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKG 113
+A++G+ NVK++ELDAM+KEASGPINFT+FL +FGEKL G D E+ I AFK+LDP+GKG
Sbjct: 59 YASLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKG 118
Query: 114 TIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQ 168
I K++++ LL +Q D+ + EE+ M+ DV GN+DYK + YVITHG+ K++
Sbjct: 119 KINKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE 173
>gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric
[Homo sapiens]
Length = 171
Score = 182 bits (462), Expect = 1e-46
Identities = 96/172 (55%), Positives = 121/172 (70%), Gaps = 5/172 (2%)
Query: 1 MAPKRAKRRTV---EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAM 57
M+ KR K +T + +S+VF+MFDQ+QIQEFKEAF +IDQNRDG IDKEDL D A++
Sbjct: 1 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL 60
Query: 58 GRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKK 117
G+ N +E LDAMM EA GPINFT+FLTMFGEKL G DPEDVI AF D E GTI++
Sbjct: 61 GK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE 119
Query: 118 KFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
+L ELLTT DRF+ EE+ ++ P D GN +Y ++ HG AKD++
Sbjct: 120 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG-AKDKD 170
>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 181 bits (458), Expect = 3e-46
Identities = 95/173 (54%), Positives = 121/173 (69%), Gaps = 6/173 (3%)
Query: 1 MAPKRAKRRTV----EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAA 56
M+ K+AK +T + +S+VF+MFDQ+QIQEFKEAF +IDQNRDG IDKEDL D A+
Sbjct: 1 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
Query: 57 MGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIK 116
+G+ N + LDAMM EA GPINFT+FLTMFGEKL G DPEDVI AF D E GTI+
Sbjct: 61 LGK-NPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQ 119
Query: 117 KKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
+ +L ELLTT DRF+ EE+ ++ P D GN +Y ++ HG AKD++
Sbjct: 120 EDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG-AKDKD 171
>gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 181 bits (458), Expect = 3e-46
Identities = 95/173 (54%), Positives = 121/173 (69%), Gaps = 6/173 (3%)
Query: 1 MAPKRAKRRTV----EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAA 56
M+ K+AK +T + +S+VF+MFDQ+QIQEFKEAF +IDQNRDG IDKEDL D A+
Sbjct: 1 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
Query: 57 MGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIK 116
+G+ N + LDAMM EA GPINFT+FLTMFGEKL G DPEDVI AF D E GTI+
Sbjct: 61 LGK-NPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQ 119
Query: 117 KKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
+ +L ELLTT DRF+ EE+ ++ P D GN +Y ++ HG AKD++
Sbjct: 120 EDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG-AKDKD 171
>gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 181 bits (458), Expect = 3e-46
Identities = 95/173 (54%), Positives = 121/173 (69%), Gaps = 6/173 (3%)
Query: 1 MAPKRAKRRTV----EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAA 56
M+ K+AK +T + +S+VF+MFDQ+QIQEFKEAF +IDQNRDG IDKEDL D A+
Sbjct: 1 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
Query: 57 MGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIK 116
+G+ N + LDAMM EA GPINFT+FLTMFGEKL G DPEDVI AF D E GTI+
Sbjct: 61 LGK-NPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQ 119
Query: 117 KKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
+ +L ELLTT DRF+ EE+ ++ P D GN +Y ++ HG AKD++
Sbjct: 120 EDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG-AKDKD 171
>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
sapiens]
Length = 172
Score = 178 bits (451), Expect = 2e-45
Identities = 95/173 (54%), Positives = 118/173 (68%), Gaps = 6/173 (3%)
Query: 1 MAPKRAKRRTV----EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAA 56
M+ KRAK +T + +S+VF+MFDQ+QIQEFKEAF +IDQNRDG IDKEDL D A+
Sbjct: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
Query: 57 MGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIK 116
+G+ N +E L+ MM EA GPINFT+FLTMFGEKL G DPEDVI AF D E G I
Sbjct: 61 LGK-NPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIH 119
Query: 117 KKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
+ L ELLTT DRF+ EE+ M+ P D GN +Y ++ HG AKD++
Sbjct: 120 EDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG-AKDKD 171
>gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo
sapiens]
Length = 154
Score = 176 bits (445), Expect = 1e-44
Identities = 90/154 (58%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Query: 16 SSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEAS 75
SS+F+MFDQ+QIQEFKEAF +IDQNRDG IDKEDL D A++G+ N + LDAMM EA
Sbjct: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGK-NPTDAYLDAMMNEAP 60
Query: 76 GPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEE 135
GPINFT+FLTMFGEKL G DPEDVI AF D E GTI++ +L ELLTT DRF+ EE
Sbjct: 61 GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEE 120
Query: 136 IKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
+ ++ P D GN +Y ++ HG AKD++
Sbjct: 121 VDELYREAPIDKKGNFNYIEFTRILKHG-AKDKD 153
>gi|88981341 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 157 bits (398), Expect = 3e-39
Identities = 84/166 (50%), Positives = 110/166 (66%), Gaps = 3/166 (1%)
Query: 4 KRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVK 63
K K+R + +S VF+ FDQ+QIQEFKEAF +IDQNRDG I KEDL A++G+ N
Sbjct: 214 KTTKKRP-QCATSKVFATFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGK-NPT 271
Query: 64 NEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEEL 123
+ LDA+M EA GPINFT+ L MFG+KL G DPEDVI AF D E GTI++ +L EL
Sbjct: 272 DACLDAVMNEAPGPINFTMLLAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQEDYLREL 331
Query: 124 LTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
LTT D+F+ EE+ ++ P D GN +Y ++ HG KD++
Sbjct: 332 LTTVGDQFTDEEVDELYTEAPIDKKGNFNYIEFTSILKHG-VKDKD 376
>gi|51464364 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 157 bits (398), Expect = 3e-39
Identities = 84/166 (50%), Positives = 110/166 (66%), Gaps = 3/166 (1%)
Query: 4 KRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVK 63
K K+R + +S VF+ FDQ+QIQEFKEAF +IDQNRDG I KEDL A++G+ N
Sbjct: 214 KTTKKRP-QCATSKVFATFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGK-NPT 271
Query: 64 NEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEEL 123
+ LDA+M EA GPINFT+ L MFG+KL G DPEDVI AF D E GTI++ +L EL
Sbjct: 272 DACLDAVMNEAPGPINFTMLLAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQEDYLREL 331
Query: 124 LTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
LTT D+F+ EE+ ++ P D GN +Y ++ HG KD++
Sbjct: 332 LTTVGDQFTDEEVDELYTEAPIDKKGNFNYIEFTSILKHG-VKDKD 376
>gi|169167243 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 154 bits (390), Expect = 3e-38
Identities = 83/166 (50%), Positives = 109/166 (65%), Gaps = 3/166 (1%)
Query: 4 KRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVK 63
K K+R + +S VF+ FDQ+QIQEFKEAF +IDQNRDG I KEDL A++G+ N
Sbjct: 214 KTTKKRP-QCATSKVFATFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGK-NPT 271
Query: 64 NEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEEL 123
+ LDA+M EA GPINFT+ L MFG+KL G DPEDVI AF D E GTI++ +L EL
Sbjct: 272 DACLDAVMNEAPGPINFTMLLAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQEDYLREL 331
Query: 124 LTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
LTT D+F+ EE+ ++ D GN +Y ++ HG KD++
Sbjct: 332 LTTVGDQFTDEEVDELYTEASIDKKGNFNYIEFTSILKHG-VKDKD 376
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 81.3 bits (199), Expect = 4e-16
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 24 QTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SGPIN 79
+ QI EFKEAF++ D++ DG I ++L ++G+ N EL M+ E +G I+
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTID 65
Query: 80 FTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNM 139
F FLTM K+K D E+ I AF+V D +G G I L ++T ++ + EE+ M
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 140 WAAFPPDVGGNVDYKNICYVIT 161
D G V+Y+ ++T
Sbjct: 126 IREADIDGDGQVNYEEFVQMMT 147
Score = 40.8 bits (94), Expect = 6e-04
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 21 MFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SG 76
M D +E +EAF V D++ +G I +LR +G + +EE+D M++EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDG 135
Query: 77 PINFTVFLTMFGEK 90
+N+ F+ M K
Sbjct: 136 QVNYEEFVQMMTAK 149
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 81.3 bits (199), Expect = 4e-16
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 24 QTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SGPIN 79
+ QI EFKEAF++ D++ DG I ++L ++G+ N EL M+ E +G I+
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTID 65
Query: 80 FTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNM 139
F FLTM K+K D E+ I AF+V D +G G I L ++T ++ + EE+ M
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 140 WAAFPPDVGGNVDYKNICYVIT 161
D G V+Y+ ++T
Sbjct: 126 IREADIDGDGQVNYEEFVQMMT 147
Score = 40.8 bits (94), Expect = 6e-04
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 21 MFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SG 76
M D +E +EAF V D++ +G I +LR +G + +EE+D M++EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDG 135
Query: 77 PINFTVFLTMFGEK 90
+N+ F+ M K
Sbjct: 136 QVNYEEFVQMMTAK 149
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 81.3 bits (199), Expect = 4e-16
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 24 QTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SGPIN 79
+ QI EFKEAF++ D++ DG I ++L ++G+ N EL M+ E +G I+
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTID 65
Query: 80 FTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNM 139
F FLTM K+K D E+ I AF+V D +G G I L ++T ++ + EE+ M
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 140 WAAFPPDVGGNVDYKNICYVIT 161
D G V+Y+ ++T
Sbjct: 126 IREADIDGDGQVNYEEFVQMMT 147
Score = 40.8 bits (94), Expect = 6e-04
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 21 MFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SG 76
M D +E +EAF V D++ +G I +LR +G + +EE+D M++EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDG 135
Query: 77 PINFTVFLTMFGEK 90
+N+ F+ M K
Sbjct: 136 QVNYEEFVQMMTAK 149
>gi|31563524 myosin regulatory light chain 9 isoform b [Homo
sapiens]
Length = 118
Score = 80.5 bits (197), Expect = 6e-16
Identities = 59/173 (34%), Positives = 78/173 (45%), Gaps = 60/173 (34%)
Query: 1 MAPKRAKRRTV----EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAA 56
M+ KRAK +T + +S+VF+MFDQ+QIQEFKEAF +IDQNRDG IDK
Sbjct: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDK--------- 51
Query: 57 MGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIK 116
E+L M+ G I
Sbjct: 52 --------EDLHDMLASL--------------------------------------GFIH 65
Query: 117 KKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
+ L ELLTT DRF+ EE+ M+ P D GN +Y ++ HG AKD++
Sbjct: 66 EDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG-AKDKD 117
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 80.1 bits (196), Expect = 8e-16
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 24 QTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKE----ASGPIN 79
+ Q+ EFKEAF++ D++ DG I +L ++G+ N EL MM E +G ++
Sbjct: 7 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQ-NPTEAELRDMMSEIDRDGNGTVD 65
Query: 80 FTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNM 139
F FL M K+K D E+ I AF+V D +G G + L ++T ++ S EE+ M
Sbjct: 66 FPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEM 125
Query: 140 WAAFPPDVGGNVDYKNICYVI 160
A D G V+Y+ V+
Sbjct: 126 IRAADTDGDGQVNYEEFVRVL 146
Score = 37.7 bits (86), Expect = 0.005
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 21 MFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SG 76
M D +E +EAF V D++ +G + +LR +G + +EE+D M++ A G
Sbjct: 77 MKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGE-KLSDEEVDEMIRAADTDGDG 135
Query: 77 PINFTVFLTMFGEK 90
+N+ F+ + K
Sbjct: 136 QVNYEEFVRVLVSK 149
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 63.9 bits (154), Expect = 6e-11
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 24 QTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMM----KEASGPIN 79
+ Q QE +EAF + D + G ID ++L+ A+G K EE+ M+ KE +G +N
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALG-FEPKKEEIKKMISEIDKEGTGKMN 85
Query: 80 FTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNM 139
F FLT+ +K+ D ++ I AFK+ D + G I K L+ + + + EE++ M
Sbjct: 86 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 145
Query: 140 WAAFPPDVGGNV 151
D G V
Sbjct: 146 IDEADRDGDGEV 157
Score = 28.5 bits (62), Expect = 2.9
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 100 ITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYV 159
I AF + D +G GTI K L+ + +EEIK M + + G +++ + V
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 92
Query: 160 IT 161
+T
Sbjct: 93 MT 94
>gi|46397403 centrin 3 [Homo sapiens]
Length = 167
Score = 62.8 bits (151), Expect = 1e-10
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 4 KRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVK 63
KR KRR + + Q QE K+AF + D ++D ID +L+ A+G +VK
Sbjct: 15 KRKKRRELS-----------EEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALG-FDVK 62
Query: 64 NEELDAMMK----EASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKF 119
++ ++K EA+G I F F + + + DP + I AFK+ D + G I +
Sbjct: 63 KADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRN 122
Query: 120 LEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVIT 161
L + + S EE++ M F D G ++ + ++T
Sbjct: 123 LRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMT 164
>gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]
Length = 196
Score = 60.5 bits (145), Expect = 7e-10
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 24 QTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNE---ELDAMMKEASGPINF 80
Q QI E+KE F++ D+ + G I DL +G E L + +G ++F
Sbjct: 50 QDQINEYKECFSLYDKQQRGKIKATDLMVAMRCLGASPTPGEVQRHLQTHGIDGNGELDF 109
Query: 81 TVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNMW 140
+ FLT+ ++K DP+ I A ++D E KG + L LT+ ++ + +E+ +++
Sbjct: 110 STFLTIMHMQIKQEDPKKEILLAMLMVDKEKKGYVMASDLRSKLTSLGEKLTHKEVDDLF 169
Query: 141 AAFPPDVGGNVDYKNICYVIT 161
+ G V Y + IT
Sbjct: 170 READIEPNGKVKYDEFIHKIT 190
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 59.3 bits (142), Expect = 2e-09
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 24 QTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMM----KEASGPIN 79
+ Q QE +EAF + D + G ID ++L+ A+G + EE+ M+ +E +G I+
Sbjct: 27 EDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALG-FEPRKEEMKKMISEVDREGTGKIS 85
Query: 80 FTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNM 139
F FL + +K+ D ++ I AF++ D + G I K L+ + + + EE++ M
Sbjct: 86 FNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEM 145
Query: 140 WAAFPPDVGGNVD 152
D G V+
Sbjct: 146 IDEADRDGDGEVN 158
Score = 28.9 bits (63), Expect = 2.2
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 95 DPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYK 154
D + + AF + D +G GTI K L+ + +EE+K M + + G + +
Sbjct: 28 DQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFN 87
Query: 155 NICYVIT 161
+ V+T
Sbjct: 88 DFLAVMT 94
>gi|4505303 smooth muscle and non-muscle myosin alkali light chain
6B [Homo sapiens]
Length = 208
Score = 58.9 bits (141), Expect = 2e-09
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 2 APKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLN 61
AP++ + V+ S V F++ Q++EFKEAF + D+ DG I D A+G+
Sbjct: 43 APQKTQEPPVD--LSKVVIEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNP 100
Query: 62 VKNEELDAMMKEASGP-----INFTVFLTMFGEKLKGADP---EDVITGAFKVLDPEGKG 113
E L + S ++F FL M K ED + G F+V D EG G
Sbjct: 101 TNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEG-FRVFDKEGNG 159
Query: 114 TIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYK 154
+ L +LTT ++ ++EE++ + A D G ++Y+
Sbjct: 160 KVMGAELRHVLTTLGEKMTEEEVETVLAGH-EDSNGCINYE 199
>gi|88999583 myosin, light chain 6, alkali, smooth muscle and
non-muscle isoform 2 [Homo sapiens]
Length = 151
Score = 58.9 bits (141), Expect = 2e-09
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 22 FDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEASGPIN-- 79
F + Q EFKEAF + D+ DG I D A+G+ E L + S +N
Sbjct: 4 FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVK 63
Query: 80 ---FTVFLTMFGEKLKGADP---EDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQ 133
F FL M K D ED + G +V D EG GT+ + +L T ++ ++
Sbjct: 64 VLDFEHFLPMLQTVAKNKDQGTYEDYVEG-LRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 122
Query: 134 EEIKNMWAAFPPDVGGNVDYKNICYVITHG 163
EE++ M A D G ++Y+ + ++ +G
Sbjct: 123 EEVE-MLVAGHEDSNGCINYEELVRMVLNG 151
>gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo
sapiens]
Length = 162
Score = 57.8 bits (138), Expect = 4e-09
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 28 QEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMK----EASGPINFTVF 83
++ KEAF V D + +D ++ ++G + E D + + E +G I F F
Sbjct: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
Query: 84 LTMFGEKLKGAD----PEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNM 139
L + E L PEDV+ AF+VLD +G + K L + +T + + FSQEE++ M
Sbjct: 77 LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEM 136
Query: 140 WAAFPPDVGGNVDYKN 155
+A +++YK+
Sbjct: 137 LSAAIDPESNSINYKD 152
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 55.5 bits (132), Expect = 2e-08
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 20 SMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----S 75
S + I EFK AF + D + G I ++L +G+ K EELDA+++E S
Sbjct: 10 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTK-EELDAIIEEVDEDGS 68
Query: 76 GPINFTVFLTMFGEKLKG---ADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFS 132
G I+F FL M ++K E+ + F++ D G I + L E+ + +
Sbjct: 69 GTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVT 128
Query: 133 QEEIKNMWAAFPPDVGGNVDY 153
EEI+++ + G +D+
Sbjct: 129 DEEIESLMKDGDKNNDGRIDF 149
Score = 46.6 bits (109), Expect = 1e-05
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 28 QEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SGPINFTVF 83
+E E F + D+N DG ID E+L + F A G +V +EE++++MK+ G I+F F
Sbjct: 94 EELAECFRIFDRNADGYIDPEELAEIFRASGE-HVTDEEIESLMKDGDKNNDGRIDFDEF 152
Query: 84 LTM 86
L M
Sbjct: 153 LKM 155
>gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f
[Homo sapiens]
Length = 194
Score = 55.5 bits (132), Expect = 2e-08
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 2 APKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRL- 60
AP AK + + S++ F + Q EFKEAF + D+ D I + D A+G
Sbjct: 27 APAPAKPKEEKIDLSAIKIEFSKEQQDEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNP 86
Query: 61 ----------NVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADP---EDVITGAFKVL 107
N NEEL+A I F FL M D ED + G +V
Sbjct: 87 TNAEVRKVLGNPSNEELNAK------KIEFEQFLPMMQAISNNKDQATYEDFVEG-LRVF 139
Query: 108 DPEGKGTIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYK 154
D EG GT+ L +L T ++ +EE++ + A D G ++Y+
Sbjct: 140 DKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAG-QEDSNGCINYE 185
>gi|17986258 myosin, light chain 6, alkali, smooth muscle and
non-muscle isoform 1 [Homo sapiens]
Length = 151
Score = 55.5 bits (132), Expect = 2e-08
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 22 FDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEASGPIN-- 79
F + Q EFKEAF + D+ DG I D A+G+ E L + S +N
Sbjct: 4 FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVK 63
Query: 80 ---FTVFLTMFGEKLKGADP---EDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQ 133
F FL M K D ED + G +V D EG GT+ + +L T ++ ++
Sbjct: 64 VLDFEHFLPMLQTVAKNKDQGTYEDYVEG-LRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 122
Query: 134 EEIKNMWAAFPPDVGGNVDYK 154
EE++ M A D G ++Y+
Sbjct: 123 EEVE-MLVAGHEDSNGCINYE 142
>gi|4557777 slow skeletal ventricular myosin alkali light chain 3
[Homo sapiens]
Length = 195
Score = 55.1 bits (131), Expect = 3e-08
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 3 PKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNR--DGIIDKEDLRDTFAAMGRL 60
P+ + + VE +S + F QI+EFKEAF + D+ + I D A+G+
Sbjct: 27 PEPERPKEVEFDASKIKIEFTPEQIEEFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQN 86
Query: 61 NVKNEELDAMMKEASGPIN-----FTVFLTMFGEKLKGADP---EDVITGAFKVLDPEGK 112
+ E L + K +N F FL M K D ED + G +V D EG
Sbjct: 87 PTQAEVLRVLGKPRQEELNTKMMDFETFLPMLQHISKNKDTGTYEDFVEG-LRVFDKEGN 145
Query: 113 GTIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYK 154
GT+ L +L T +R +++E++ + A D G ++Y+
Sbjct: 146 GTVMGAELRHVLATLGERLTEDEVEKLMAG-QEDSNGCINYE 186
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,337,104
Number of Sequences: 37866
Number of extensions: 261216
Number of successful extensions: 765
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 619
Number of HSP's gapped (non-prelim): 147
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.