Guide to the Human Genome
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Name: MYLPF Sequence: fasta or formatted (169aa) NCBI GI: 28372499
Description:

myosin light chain, phosphorylatable, fast skeletal muscle

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         12           2
 C cysteine            1.2          2           1
 D aspartate           8.9         15           1
 E glutamate           8.9         15           2
 F phenylalanine       7.1         12           1
 G glycine             7.7         13           2
 H histidine           0.6          1           1
 I isoleucine          5.9         10           2
 K lysine              9.5         16           3
 L leucine             5.3          9           2
 M methionine          4.1          7           2
 N asparagine          4.1          7           1
 P proline             3.6          6           2
 Q glutamine           4.1          7           1
 R arginine            4.1          7           2
 S serine              3.6          6           3
 T threonine           6.5         11           2
 V valine              5.9         10           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin light chain, phosphorylatable, fast skeletal ... 
MYL2                  0.722   slow cardiac myosin regulatory light chain 2 
MYL10                 0.672   myosin, light chain 10, regulatory 
MYL7                  0.584   myosin light chain 2a 
MYL5                  0.577   myosin regulatory light chain 5 
MYL12A                0.495   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL12B                0.492   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.492   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.492   myosin regulatory light chain MRCL2 isoform A 
MYL9                  0.483   myosin regulatory light chain 9 isoform a 
MYL12B                0.476   myosin regulatory light chain MRCL2 isoform B [Homo...
LOC391722             0.416   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.416   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.407   PREDICTED: similar to myosin regulatory light chain...
CALM3                 0.177   calmodulin 3 
CALM2                 0.177   calmodulin 2 
CALM1                 0.177   calmodulin 1 
MYL9                  0.174   myosin regulatory light chain 9 isoform b 
CALML3                0.174   calmodulin-like 3 
CETN2                 0.123   caltractin 
CETN3                 0.120   centrin 3 
CALML4                0.110   calmodulin-like 4 isoform 1 
CETN1                 0.107   centrin 1 
MYL6B                 0.107   smooth muscle and non-muscle myosin alkali light chai...
MYL6                  0.107   myosin, light chain 6, alkali, smooth muscle and non...
EFCAB2                0.104   EF-hand calcium binding domain 2 isoform a 
TNNC2                 0.095   fast skeletal muscle troponin C 
MYL1                  0.095   fast skeletal myosin alkali light chain 1 isoform 1f...
MYL6                  0.095   myosin, light chain 6, alkali, smooth muscle and non...
MYL3                  0.095   slow skeletal ventricular myosin alkali light chain 3...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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