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Search of human proteins with 28269693
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28269693 xylosyltransferase I [Homo sapiens]
(959 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28269693 xylosyltransferase I [Homo sapiens] 1997 0.0
gi|110611246 xylosyltransferase II [Homo sapiens] 951 0.0
gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching e... 79 3e-14
gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Ho... 73 1e-12
gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching en... 73 1e-12
gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching e... 71 4e-12
gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 69 2e-11
gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 69 2e-11
gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 69 2e-11
gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... 69 2e-11
gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6... 69 2e-11
gi|190684701 glucosaminyl (N-acetyl) transferase family member 7... 66 2e-10
gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Ho... 62 3e-09
gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 55 3e-07
gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 55 3e-07
gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... 55 3e-07
gi|4758392 forkhead box D1 [Homo sapiens] 53 1e-06
gi|9966841 cell death regulator aven [Homo sapiens] 53 2e-06
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 52 2e-06
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 51 5e-06
gi|194363768 homeobox D9 [Homo sapiens] 49 3e-05
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 48 5e-05
gi|50843837 hypothetical protein LOC55701 [Homo sapiens] 48 5e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 47 7e-05
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 47 7e-05
gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo ... 47 9e-05
gi|157743259 H6 family homeobox 3 [Homo sapiens] 47 1e-04
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 47 1e-04
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 47 1e-04
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 47 1e-04
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 1997 bits (5174), Expect = 0.0
Identities = 959/959 (100%), Positives = 959/959 (100%)
Query: 1 MVAAPCARRLARRSHSALLAALTVLLLQTLVVWNFSSLDSGAGERRGGAAVGGGEQPPPA 60
MVAAPCARRLARRSHSALLAALTVLLLQTLVVWNFSSLDSGAGERRGGAAVGGGEQPPPA
Sbjct: 1 MVAAPCARRLARRSHSALLAALTVLLLQTLVVWNFSSLDSGAGERRGGAAVGGGEQPPPA 60
Query: 61 PAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEPRGQQPASRGALPARA 120
PAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEPRGQQPASRGALPARA
Sbjct: 61 PAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEPRGQQPASRGALPARA 120
Query: 121 LDPHPSPLITLETQDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRTQKQKHQPE 180
LDPHPSPLITLETQDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRTQKQKHQPE
Sbjct: 121 LDPHPSPLITLETQDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRTQKQKHQPE 180
Query: 181 LAKKPPSRQKELLKRKLEQQEKGKGHTFPGKGPGEVLPPGDRAAANSSHGKDVSRPPHAR 240
LAKKPPSRQKELLKRKLEQQEKGKGHTFPGKGPGEVLPPGDRAAANSSHGKDVSRPPHAR
Sbjct: 181 LAKKPPSRQKELLKRKLEQQEKGKGHTFPGKGPGEVLPPGDRAAANSSHGKDVSRPPHAR 240
Query: 241 KTGGSSPETKYDQPPKCDISGKEAISALSRAKSKHCRQEIGETYCRHKLGLLMPEKVTRF 300
KTGGSSPETKYDQPPKCDISGKEAISALSRAKSKHCRQEIGETYCRHKLGLLMPEKVTRF
Sbjct: 241 KTGGSSPETKYDQPPKCDISGKEAISALSRAKSKHCRQEIGETYCRHKLGLLMPEKVTRF 300
Query: 301 CPLEGKANKNVQWDEDSVEYMPANPVRIAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHV 360
CPLEGKANKNVQWDEDSVEYMPANPVRIAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHV
Sbjct: 301 CPLEGKANKNVQWDEDSVEYMPANPVRIAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHV 360
Query: 361 DKRSNYLHRQVLQVSRQYSNVRVTPWRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFI 420
DKRSNYLHRQVLQVSRQYSNVRVTPWRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFI
Sbjct: 361 DKRSNYLHRQVLQVSRQYSNVRVTPWRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFI 420
Query: 421 NLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGD 480
NLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGD
Sbjct: 421 NLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGD 480
Query: 481 RRIPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSP 540
RRIPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSP
Sbjct: 481 RRIPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSP 540
Query: 541 HCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKF 600
HCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKF
Sbjct: 541 HCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKF 600
Query: 601 EAVVNQEIIGQLDYYLYGNYPAGTPGLRSYWENVYDEPDGIHSLSDVTLTLYHSFARLGL 660
EAVVNQEIIGQLDYYLYGNYPAGTPGLRSYWENVYDEPDGIHSLSDVTLTLYHSFARLGL
Sbjct: 601 EAVVNQEIIGQLDYYLYGNYPAGTPGLRSYWENVYDEPDGIHSLSDVTLTLYHSFARLGL 660
Query: 661 RRAETSLHTDGENSCRYYPMGHPASVHLYFLADRFQGFLIKHHATNLAVSKLETLETWVM 720
RRAETSLHTDGENSCRYYPMGHPASVHLYFLADRFQGFLIKHHATNLAVSKLETLETWVM
Sbjct: 661 RRAETSLHTDGENSCRYYPMGHPASVHLYFLADRFQGFLIKHHATNLAVSKLETLETWVM 720
Query: 721 PKKVFKIASPPSDFGRLQFSEVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTV 780
PKKVFKIASPPSDFGRLQFSEVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTV
Sbjct: 721 PKKVFKIASPPSDFGRLQFSEVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTV 780
Query: 781 TVIWVDPVNVIAATYDILIESTAEFTHYKPPLNLPLRPGVWTVKILHHWVPVAETKFLVA 840
TVIWVDPVNVIAATYDILIESTAEFTHYKPPLNLPLRPGVWTVKILHHWVPVAETKFLVA
Sbjct: 781 TVIWVDPVNVIAATYDILIESTAEFTHYKPPLNLPLRPGVWTVKILHHWVPVAETKFLVA 840
Query: 841 PLTFSNRQPIKPEEALKLHNGPLRNAYMEQSFQSLNPVLSLPINPAQVEQARRNAASTGT 900
PLTFSNRQPIKPEEALKLHNGPLRNAYMEQSFQSLNPVLSLPINPAQVEQARRNAASTGT
Sbjct: 841 PLTFSNRQPIKPEEALKLHNGPLRNAYMEQSFQSLNPVLSLPINPAQVEQARRNAASTGT 900
Query: 901 ALEGWLDSLVGGMWTAMDICATGPTACPVMQTCSQTAWSSFSPDPKSELGAVKPDGRLR 959
ALEGWLDSLVGGMWTAMDICATGPTACPVMQTCSQTAWSSFSPDPKSELGAVKPDGRLR
Sbjct: 901 ALEGWLDSLVGGMWTAMDICATGPTACPVMQTCSQTAWSSFSPDPKSELGAVKPDGRLR 959
>gi|110611246 xylosyltransferase II [Homo sapiens]
Length = 865
Score = 951 bits (2459), Expect = 0.0
Identities = 451/755 (59%), Positives = 552/755 (73%), Gaps = 7/755 (0%)
Query: 209 PGKGPGEVLPPGDRAAANSSHGKDVSRPPHARKTG---GSSPETKYDQPPKCDISGKEAI 265
P + PG G AAA + PPH TG G+ T PKC+I GK+A+
Sbjct: 114 PPEAPGRQNLSG--AAAGEALVGAAGFPPHG-DTGSVEGAPQPTDNGFTPKCEIVGKDAL 170
Query: 266 SALSRAKSKHCRQEIGETYCRHKLGLLMPEKVTRFCPLEGKANKNVQWDEDSVEY-MPAN 324
SAL+RA +K C+QEI C H+ G LMP+ V R C L GK + +QWDE + M
Sbjct: 171 SALARASTKQCQQEIANVVCLHQAGSLMPKAVPRHCQLTGKMSPGIQWDESQAQQPMDGP 230
Query: 325 PVRIAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQVSRQYSNVRVT 384
PVRIA++LVVHGRA RQL+R+ KA+YH+ HF+YIHVDKRS+YLHR+V+++++ Y NVRVT
Sbjct: 231 PVRIAYMLVVHGRAIRQLKRLLKAVYHEQHFFYIHVDKRSDYLHREVVELAQGYDNVRVT 290
Query: 385 PWRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRD 444
PWRM TIWGGASLL YL+SMRDLLE+ W WDFFINLSA DYP RTN++LVAFLS+ RD
Sbjct: 291 PWRMVTIWGGASLLRMYLRSMRDLLEVPGWAWDFFINLSATDYPTRTNEELVAFLSKNRD 350
Query: 445 MNFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRIPEGIAVDGGSDWFLLNRRFVE 504
NFLKSHGRDN+RFI+KQGLDRLF ECD+HMWRLG+R+IP GI VDGGSDWF+L R FVE
Sbjct: 351 KNFLKSHGRDNSRFIKKQGLDRLFHECDSHMWRLGERQIPAGIVVDGGSDWFVLTRSFVE 410
Query: 505 YVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHCDTMVDNNLRITNWNRKLGCKCQ 564
YV ++ D LV +++QFY+YTLLPAESFFHTVLENS C+T+VDNNLR+TNWNRKLGCKCQ
Sbjct: 411 YVVYTDDPLVAQLRQFYTYTLLPAESFFHTVLENSLACETLVDNNLRVTNWNRKLGCKCQ 470
Query: 565 YKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFEAVVNQEIIGQLDYYLYGNYPAGT 624
YKHIVDWCGCSPNDFKPQDF R QQ +RPTFFARKFE+ VNQE++ LD++LYG+YP GT
Sbjct: 471 YKHIVDWCGCSPNDFKPQDFLRLQQVSRPTFFARKFESTVNQEVLEILDFHLYGSYPPGT 530
Query: 625 PGLRSYWENVYDEPDGIHSLSDVTLTLYHSFARLGLRRAETSLHTDGENSCRYYPMGHPA 684
P L++YWEN YD DG LSDV LT Y +FARL L A T+ G CR+ P G P+
Sbjct: 531 PALKAYWENTYDAADGPSGLSDVMLTAYTAFARLSLHHAATAAPPMGTPLCRFEPRGLPS 590
Query: 685 SVHLYFLADRFQGFLIKHHATNLAVSKLETLETWVMPKKVFKIASPPSDFGRLQFSEVGT 744
SVHLYF D FQG+L+ A ETLE W+MP+ K+ RLQ EVGT
Sbjct: 591 SVHLYFYDDHFQGYLVTQAVQPSAQGPAETLEMWLMPQGSLKLLGRSDQASRLQSLEVGT 650
Query: 745 DWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTVTVIWVDPVNVIAATYDILIESTAE 804
DWD KERLFRNFGGLLGP+DEPV +Q+W +GPN+T TV+W+DP V+A +YDI +++ E
Sbjct: 651 DWDPKERLFRNFGGLLGPLDEPVAVQRWARGPNLTATVVWIDPTYVVATSYDITVDTETE 710
Query: 805 FTHYKPPLNLPLRPGVWTVKILHHWVPVAETKFLVAPLTFSNRQPIKPEEALKLHNGPLR 864
T YKPPL+ PLRPG WTV++L W P+ ET+FLV PLTF+ + P++ ++A LH GP
Sbjct: 711 VTQYKPPLSRPLRPGPWTVRLLQFWEPLGETRFLVLPLTFNRKLPLRKDDASWLHAGPPH 770
Query: 865 NAYMEQSFQSLNPVLSLPINPAQVEQARRNAASTGTALEGWLDSLVGGMWTAMDICATGP 924
N YMEQSFQ L+ +L+LP E A+R+ TG ALE W D + W+ +CA GP
Sbjct: 771 NEYMEQSFQGLSSILNLPQPELAEEAAQRHTQLTGPALEAWTDRELSSFWSVAGLCAIGP 830
Query: 925 TACPVMQTCSQTAWSSFSPDPKSELGAVKPDGRLR 959
+ CP ++ C T+WSS SPDPKSELG VK DGRLR
Sbjct: 831 SPCPSLEPCRLTSWSSLSPDPKSELGPVKADGRLR 865
Score = 52.0 bits (123), Expect = 3e-06
Identities = 44/127 (34%), Positives = 55/127 (43%), Gaps = 24/127 (18%)
Query: 1 MVAAPCARRLARRSHSALLAALTVLLLQTLVVWNFSSLDSG-AGERRGGAAVGGGEQPPP 59
MVA+ ++L RR A+ AL +LLLQ LVVW+FS L+ AGE+ G Q P
Sbjct: 1 MVASARVQKLVRRYKLAIATALAILLLQGLVVWSFSGLEEDEAGEK--------GRQRKP 52
Query: 60 APAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEP--------RGQQPA 111
P P E + G G G R + R R PG P +Q A
Sbjct: 53 RPLD-------PGEGSKDTDSSAGRRGSTGRRHGRWRGRAESPGVPVAKVVRAVTSRQRA 105
Query: 112 SRGALPA 118
SR PA
Sbjct: 106 SRRVPPA 112
>gi|85790495 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform C [Homo sapiens]
Length = 402
Score = 78.6 bits (192), Expect = 3e-14
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 31/289 (10%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQ-VLQVSRQYSNVRVTPW 386
+A+V+V+H + +R+F+AIY + Y +HVD+++ +++ V Q+ + N +
Sbjct: 97 LAYVMVIH-KDFDTFERLFRAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASK 155
Query: 387 RMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMN 446
+ ++ G S L L ++DL+ ++ PW + IN D+P++TN ++V L ++ N
Sbjct: 156 TESVVYAGISRLQADLNCLKDLVA-SEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKN 214
Query: 447 FL-----KSHGRDNARFIRKQGLDR-LFLECDAHMWRLGDRRIPEGIAVDGGSDWFLLNR 500
H +++ ++ D+ F + ++ + P + + G+ + L R
Sbjct: 215 ITPGVLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTSP---PHQLTIYFGTAYVALTR 271
Query: 501 RFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHCDTMVD----NNLRITNW- 555
FV++V D + Q+ T P E F+ T+ S +M + NLR W
Sbjct: 272 DFVDFVL--RDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIKWS 329
Query: 556 ---NRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFE 601
+R GC Y H + C D K P+ FA KFE
Sbjct: 330 DMEDRHGGCHGHYVHGI--CIYGNGDLK-------WLVNSPSLFANKFE 369
>gi|7706127 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Homo
sapiens]
Length = 453
Score = 73.2 bits (178), Expect = 1e-12
Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 41/327 (12%)
Query: 303 LEGKANKNVQWDEDSVEYMPANPVRIAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDK 362
L G A K V +E S IA+ LVVH A ++R+ AIY++ + Y IH D+
Sbjct: 116 LRGYAQKLVSKEEKSFP--------IAYSLVVHKDAI-MVERLIHAIYNQHNIYCIHYDR 166
Query: 363 RSNYLHRQVLQ-VSRQYSNVRVTPWRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFIN 421
++ + + +++ +SN+ + A + S L L + DLL+ + W + IN
Sbjct: 167 KAPDTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLK-SSIQWKYVIN 225
Query: 422 LSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNA---RFIRKQGLDRLFLECDAHMWR- 477
L D+P+++N +LV+ L + N L++ N+ RF L R+ E R
Sbjct: 226 LCGQDFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPIRT 285
Query: 478 -LGDRRIPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTV- 535
+ P I + GS +F+L++ FV+Y+ + +V + T P E F+ T+
Sbjct: 286 NISKEAPPHNIQIFVGSAYFVLSQAFVKYI--FNNSIVQDFFAWSKDTYSPDEHFWATLI 343
Query: 536 --------LENSPHCDTMVDNNLRITNWNRKLGC---KCQYKHIVDWC--GCSPNDFKPQ 582
+ S + + + R+ WN G C H+ C G + + +
Sbjct: 344 RVPGIPGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIK 403
Query: 583 DFHRFQQTARPTFFARKFEAVVNQEII 609
D H +FA KF++ V+ +I
Sbjct: 404 DGH---------WFANKFDSKVDPILI 421
>gi|4503963 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform B [Homo sapiens]
Length = 400
Score = 73.2 bits (178), Expect = 1e-12
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 35/291 (12%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVL-QVSRQYSNVRVTPW 386
+A+++V+H R+F+AIY + Y +HVD+++ + + Q+ + N +
Sbjct: 95 LAYIMVIHHHFDT-FARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASK 153
Query: 387 RMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMN 446
++GG S L L +RDL + W + IN D+P++TN ++V +L ++ N
Sbjct: 154 MEPVVYGGISRLQADLNCIRDLSAF-EVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKN 212
Query: 447 FL-----KSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRR--IPEGIAVDGGSDWFLLN 499
+H +++ ++ L + +++ R + P + + GS + L+
Sbjct: 213 ITPGVLPPAHAIGRTKYVHQEHLGKEL----SYVIRTTALKPPPPHNLTIYFGSAYVALS 268
Query: 500 RRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHCDTMVDN-----NLRITN 554
R F +V D + Q+ T P E F+ T L P + N NLR
Sbjct: 269 REFANFVLH--DPRAVDLLQWSKDTFSPDEHFWVT-LNRIPGVPGSMPNASWTGNLRAIK 325
Query: 555 W----NRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFE 601
W +R GC Y H + C D K P+ FA KFE
Sbjct: 326 WSDMEDRHGGCHGHYVHGI--CIYGNGDLK-------WLVNSPSLFANKFE 367
>gi|21717810 glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme isoform A [Homo sapiens]
Length = 402
Score = 71.2 bits (173), Expect = 4e-12
Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 35/291 (12%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHR-QVLQVSRQYSNVRVTPW 386
+A+ + +H + +R+F+AIY + Y +H+D+++ + V Q+ + N +
Sbjct: 97 LAYTVTIH-KDFGTFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASK 155
Query: 387 RMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMN 446
+ + ++GG S L L + DL+ ++ PW + IN D+P++TN ++V +L ++ N
Sbjct: 156 KESVVYGGISRLQADLNCLEDLVA-SEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKN 214
Query: 447 FL-----KSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRI--PEGIAVDGGSDWFLLN 499
H +++ ++ L+ ++++ + + P + + G+ + L
Sbjct: 215 ITPGVLPPDHAVGRTKYVHQELLNHK----NSYVIKTTKLKTPPPHDMVIYFGTAYVALT 270
Query: 500 RRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHCDTMVDN-----NLRITN 554
R F +V D L + + T P E F+ T L P + N NLR
Sbjct: 271 RDFANFVL--QDQLALDLLSWSKDTYSPDEHFWVT-LNRIPGVPGSMPNASWTGNLRAIK 327
Query: 555 W----NRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFE 601
W +R GC Y H + C D K P+ FA KFE
Sbjct: 328 WSDMEDRHGGCHGHYVHGI--CIYGNGDLK-------WLVNSPSLFANKFE 369
>gi|148277035 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 69.3 bits (168), Expect = 2e-11
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRS--NYLHRQVLQVSRQYSNVRVTP 385
IA+ +VVH + L R+ +AIY +FY IHVD +S +YL V+ ++ +SNV V
Sbjct: 123 IAYSIVVHHKIE-MLDRLLRAIYMPQNFYCIHVDTKSEDSYL-AAVMGIASCFSNVFVAS 180
Query: 386 WRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDM 445
+ ++ S + L M+DL M+ W + INL D+PI+TN ++V L
Sbjct: 181 RLESVVYASWSRVQADLNCMKDLYAMSA-NWKYLINLCGMDFPIKTNLEIVRKLKLLMGE 239
Query: 446 NFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRI--PEGIAVDGGSDWFLLNRRFV 503
N L++ + +++ + + + + G ++ P + GS +F+++R +V
Sbjct: 240 NNLETERMPSH---KEERWKKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFVVSREYV 296
Query: 504 EYVTFSTDDLVTKMKQFYSYTLLPAESFFHTV 535
YV ++ + K+ ++ T P E + T+
Sbjct: 297 GYVL--QNEKIQKLMEWAQDTYSPDEYLWATI 326
>gi|148277033 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 69.3 bits (168), Expect = 2e-11
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRS--NYLHRQVLQVSRQYSNVRVTP 385
IA+ +VVH + L R+ +AIY +FY IHVD +S +YL V+ ++ +SNV V
Sbjct: 123 IAYSIVVHHKIE-MLDRLLRAIYMPQNFYCIHVDTKSEDSYL-AAVMGIASCFSNVFVAS 180
Query: 386 WRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDM 445
+ ++ S + L M+DL M+ W + INL D+PI+TN ++V L
Sbjct: 181 RLESVVYASWSRVQADLNCMKDLYAMSA-NWKYLINLCGMDFPIKTNLEIVRKLKLLMGE 239
Query: 446 NFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRI--PEGIAVDGGSDWFLLNRRFV 503
N L++ + +++ + + + + G ++ P + GS +F+++R +V
Sbjct: 240 NNLETERMPSH---KEERWKKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFVVSREYV 296
Query: 504 EYVTFSTDDLVTKMKQFYSYTLLPAESFFHTV 535
YV ++ + K+ ++ T P E + T+
Sbjct: 297 GYVL--QNEKIQKLMEWAQDTYSPDEYLWATI 326
>gi|148277031 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 69.3 bits (168), Expect = 2e-11
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRS--NYLHRQVLQVSRQYSNVRVTP 385
IA+ +VVH + L R+ +AIY +FY IHVD +S +YL V+ ++ +SNV V
Sbjct: 123 IAYSIVVHHKIE-MLDRLLRAIYMPQNFYCIHVDTKSEDSYL-AAVMGIASCFSNVFVAS 180
Query: 386 WRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDM 445
+ ++ S + L M+DL M+ W + INL D+PI+TN ++V L
Sbjct: 181 RLESVVYASWSRVQADLNCMKDLYAMSA-NWKYLINLCGMDFPIKTNLEIVRKLKLLMGE 239
Query: 446 NFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRI--PEGIAVDGGSDWFLLNRRFV 503
N L++ + +++ + + + + G ++ P + GS +F+++R +V
Sbjct: 240 NNLETERMPSH---KEERWKKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFVVSREYV 296
Query: 504 EYVTFSTDDLVTKMKQFYSYTLLPAESFFHTV 535
YV ++ + K+ ++ T P E + T+
Sbjct: 297 GYVL--QNEKIQKLMEWAQDTYSPDEYLWATI 326
>gi|148277029 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 69.3 bits (168), Expect = 2e-11
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRS--NYLHRQVLQVSRQYSNVRVTP 385
IA+ +VVH + L R+ +AIY +FY IHVD +S +YL V+ ++ +SNV V
Sbjct: 123 IAYSIVVHHKIE-MLDRLLRAIYMPQNFYCIHVDTKSEDSYL-AAVMGIASCFSNVFVAS 180
Query: 386 WRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDM 445
+ ++ S + L M+DL M+ W + INL D+PI+TN ++V L
Sbjct: 181 RLESVVYASWSRVQADLNCMKDLYAMSA-NWKYLINLCGMDFPIKTNLEIVRKLKLLMGE 239
Query: 446 NFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRI--PEGIAVDGGSDWFLLNRRFV 503
N L++ + +++ + + + + G ++ P + GS +F+++R +V
Sbjct: 240 NNLETERMPSH---KEERWKKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFVVSREYV 296
Query: 504 EYVTFSTDDLVTKMKQFYSYTLLPAESFFHTV 535
YV ++ + K+ ++ T P E + T+
Sbjct: 297 GYVL--QNEKIQKLMEWAQDTYSPDEYLWATI 326
>gi|21614523 beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 428
Score = 69.3 bits (168), Expect = 2e-11
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRS--NYLHRQVLQVSRQYSNVRVTP 385
IA+ +VVH + L R+ +AIY +FY IHVD +S +YL V+ ++ +SNV V
Sbjct: 123 IAYSIVVHHKIE-MLDRLLRAIYMPQNFYCIHVDTKSEDSYL-AAVMGIASCFSNVFVAS 180
Query: 386 WRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDM 445
+ ++ S + L M+DL M+ W + INL D+PI+TN ++V L
Sbjct: 181 RLESVVYASWSRVQADLNCMKDLYAMSA-NWKYLINLCGMDFPIKTNLEIVRKLKLLMGE 239
Query: 446 NFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRI--PEGIAVDGGSDWFLLNRRFV 503
N L++ + +++ + + + + G ++ P + GS +F+++R +V
Sbjct: 240 NNLETERMPSH---KEERWKKRYEVVNGKLTNTGTVKMLPPLETPLFSGSAYFVVSREYV 296
Query: 504 EYVTFSTDDLVTKMKQFYSYTLLPAESFFHTV 535
YV ++ + K+ ++ T P E + T+
Sbjct: 297 GYVL--QNEKIQKLMEWAQDTYSPDEYLWATI 326
>gi|190684701 glucosaminyl (N-acetyl) transferase family member 7
[Homo sapiens]
Length = 430
Score = 65.9 bits (159), Expect = 2e-10
Identities = 66/300 (22%), Positives = 137/300 (45%), Gaps = 27/300 (9%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQ-VSRQYSNVRVTPW 386
+A+++ +H + +Q + +AIY + Y IHVD+++ ++ +Q + + NV ++
Sbjct: 111 LAYIITIHKELAMFVQ-LLRAIYVPQNVYCIHVDEKAPMKYKTAVQTLVNCFENVFISSK 169
Query: 387 RMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFL-SRYRDM 445
+ G + L + M+ L+ + + W++ INL D+PI+TN +++ ++ S++ D
Sbjct: 170 TEKVAYAGFTRLQADINCMKVLVH-SKFQWNYVINLCGQDFPIKTNREIIHYIRSKWSDK 228
Query: 446 NFLKSHGRDNARFIR-KQGLDRLFLECDAHMWRLGDRRI----PEGIAVDGGSDWFLLNR 500
N + G I+ K L ++ + R P + + GS +++L R
Sbjct: 229 NI--TPGVIQPLHIKSKTSQSHLEFVPKGSIYAPPNNRFKDKPPHNLTIYFGSAYYVLTR 286
Query: 501 RFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTV--LENSPHCDTMV--DNNLRITNWN 556
+FVE++ TD M Q+ P + ++ T+ L+++P + N+R
Sbjct: 287 KFVEFIL--TDIHAKDMLQWSKDIRSPEQHYWVTLNRLKDAPGATPNAGWEGNVRAIKRK 344
Query: 557 RKLG---CKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFEAVVNQEIIGQLD 613
+ G C+ +++ D C P D P+ FA KFE + ++ L+
Sbjct: 345 SEEGNVHDGCKGRYVEDICVYGPGDLP-------WLIQSPSLFANKFEPSTDPLVVTCLE 397
>gi|4758422 glucosaminyl (N-acetyl) transferase 3, mucin type [Homo
sapiens]
Length = 438
Score = 62.0 bits (149), Expect = 3e-09
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 328 IAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQ-VSRQYSNVRVTPW 386
IA+ +V+H + +R+ +A+Y + Y +HVD++S ++ ++ + + NV +
Sbjct: 133 IAYSMVIHEKIEN-FERLLRAVYAPQNIYCVHVDEKSPETFKEAVKAIISCFPNVFIASK 191
Query: 387 RMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMN 446
+ ++ S + L M DLL+ + PW +F+N D+PI++N ++V L N
Sbjct: 192 LVRVVYASWSRVQADLNCMEDLLQ-SSVPWKYFLNTCGTDFPIKSNAEMVQALKMLNGRN 250
Query: 447 FLKS-----HGRDNARFIRKQGLDRLFLECDAHMWRLGDRRIPEGIAVDGGSDWFLLNRR 501
++S H ++ + D L H+ P + + G+ + + +R
Sbjct: 251 SMESEVPPKHKETRWKYHFEVVRDTL------HLTNKKKDPPPYNLTMFTGNAYIVASRD 304
Query: 502 FVEYVTFS--TDDLVTKMKQFYS 522
FV++V + + L+ +K YS
Sbjct: 305 FVQHVLKNPKSQQLIEWVKDTYS 327
>gi|239754233 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 55.1 bits (131), Expect = 3e-07
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 345 MFKAIYHKDHFYYIHVDKRSNYLHR-QVLQVSRQYSNVRVTPWRMATIWGGASLLSTYLQ 403
+F AIY + Y IHVDK + + V ++ +SN ++ I+GG S L L
Sbjct: 115 LFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLA 174
Query: 404 SMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKS-----HGRDNARF 458
MRDL+ T W + N D+P++TN ++V +L N + + ++
Sbjct: 175 CMRDLIASTV-QWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKY 233
Query: 459 IRKQGLDRLFLECDAHMWRLGDRR----IPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLV 514
++ R AH + L + P + + GS + L R FV + + + +
Sbjct: 234 THREYRTR------AHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALY--NKIA 285
Query: 515 TKMKQFYSYTLLPAESFFHTVLENSP 540
++ Q T P + F+ T L N P
Sbjct: 286 IELLQRSQDTYSPDKHFWIT-LNNIP 310
>gi|239748765 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 55.1 bits (131), Expect = 3e-07
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 345 MFKAIYHKDHFYYIHVDKRSNYLHR-QVLQVSRQYSNVRVTPWRMATIWGGASLLSTYLQ 403
+F AIY + Y IHVDK + + V ++ +SN ++ I+GG S L L
Sbjct: 115 LFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLA 174
Query: 404 SMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKS-----HGRDNARF 458
MRDL+ T W + N D+P++TN ++V +L N + + ++
Sbjct: 175 CMRDLIASTV-QWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKY 233
Query: 459 IRKQGLDRLFLECDAHMWRLGDRR----IPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLV 514
++ R AH + L + P + + GS + L R FV + + + +
Sbjct: 234 THREYRTR------AHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALY--NKIA 285
Query: 515 TKMKQFYSYTLLPAESFFHTVLENSP 540
++ Q T P + F+ T L N P
Sbjct: 286 IELLQRSQDTYSPDKHFWIT-LNNIP 310
>gi|239742810 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [Homo
sapiens]
Length = 391
Score = 55.1 bits (131), Expect = 3e-07
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 345 MFKAIYHKDHFYYIHVDKRSNYLHR-QVLQVSRQYSNVRVTPWRMATIWGGASLLSTYLQ 403
+F AIY + Y IHVDK + + V ++ +SN ++ I+GG S L L
Sbjct: 115 LFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSEYIIYGGKSRLQADLA 174
Query: 404 SMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKS-----HGRDNARF 458
MRDL+ T W + N D+P++TN ++V +L N + + ++
Sbjct: 175 CMRDLIASTV-QWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNITPNLVSVLKSTERIKY 233
Query: 459 IRKQGLDRLFLECDAHMWRLGDRR----IPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLV 514
++ R AH + L + P + + GS + L R FV + + + +
Sbjct: 234 THREYRTR------AHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVHFALY--NKIA 285
Query: 515 TKMKQFYSYTLLPAESFFHTVLENSP 540
++ Q T P + F+ T L N P
Sbjct: 286 IELLQRSQDTYSPDKHFWIT-LNNIP 310
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 53.1 bits (126), Expect = 1e-06
Identities = 66/252 (26%), Positives = 84/252 (33%), Gaps = 60/252 (23%)
Query: 49 AAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEPRGQ 108
A GG PP PAP A G G GGGGGGGG G A G G P +
Sbjct: 80 APPAGGSPAPPGPAP-------------AAGAGAGGGGGGGGAGGGGSA-GSGAKNPLVK 125
Query: 109 QPASRGALPARALDPHPSPLITLETQDGYFSHR--------------------------- 141
P S AL A+ P +TL + S R
Sbjct: 126 PPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVK 185
Query: 142 -PKEKVRTDSNNENSV-PKDFENVDNSNFAPRTQKQKHQPELAKKPPSRQKELLKRKLEQ 199
P+E N ++ P+ + DN +F R ++ K QP L + + LL
Sbjct: 186 IPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPPNAAAAESLLL------ 239
Query: 200 QEKGKGHTFPGKGPGEVLPPGDRAAANSSHGKDVSRPPHARKTGGSSPETKYDQPPKCDI 259
+G G GD AAA + PPHA G PP
Sbjct: 240 -----------RGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPYAPP 288
Query: 260 SGKEAISALSRA 271
S A +A + A
Sbjct: 289 SALFAAAAAAAA 300
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 52.8 bits (125), Expect = 2e-06
Identities = 43/126 (34%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 48 GAAVGGGEQPPPA-PAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARG------- 99
GA G G +P P R A A ARGGGGGGGG GGGR + R RG
Sbjct: 6 GARGGRGRRPGRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRGRGFRGARGG 65
Query: 100 -GGPGEPRG--QQPASRGALPARALDPHPSPLITLETQDGYFSHRPKEKVRTDSNNENSV 156
GG G PRG ++P GA A A S T ++ + K K+ ++ + +
Sbjct: 66 RGGGGAPRGSRREPGGWGA-GASAPVEDDSDAETYGEENDEQGNYSKRKIVSNWDRYQDI 124
Query: 157 PKDFEN 162
K+ N
Sbjct: 125 EKEVNN 130
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 52.4 bits (124), Expect = 2e-06
Identities = 31/79 (39%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 53 GGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEPRGQQPAS 112
G ++P R+ R PA AA GGGGGGGGGGGG G G G G G+ P
Sbjct: 36 GAKEPTGCTEAGRDDRSSPAVRAAGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGGRSPVR 95
Query: 113 RGALPARALDPHP-SPLIT 130
+ A P SP +T
Sbjct: 96 ELDMGAAERSREPGSPRLT 114
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 51.2 bits (121), Expect = 5e-06
Identities = 39/107 (36%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 41 GAGERRGGAAVGGGEQPPPAPAPRRERRD--LPAEPAAARGGGGGGGGGGGGRGPQARAR 98
G G G GG +PPP P P R R P RGG GGG GGGG P
Sbjct: 699 GPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPH-EGP 757
Query: 99 GGGPGEPRGQQP-ASRGALPARALDPHPSPLITLETQDGYFSHRPKE 144
GGG G G +P G PH P + G HRP E
Sbjct: 758 GGGMGNSSGHRPHEGPGGGMGSGHRPHEGP---GGSMGGGGGHRPHE 801
Score = 38.9 bits (89), Expect = 0.023
Identities = 27/65 (41%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 57 PPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGG-GPGEPRGQQPASRGA 115
PPP P D P +P GG GG G G GP R RGG G EP P RGA
Sbjct: 669 PPPPPRGGDPFWDGPGDPMR---GGPMRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGA 725
Query: 116 LPARA 120
R+
Sbjct: 726 RGGRS 730
Score = 34.7 bits (78), Expect = 0.44
Identities = 52/214 (24%), Positives = 65/214 (30%), Gaps = 49/214 (22%)
Query: 40 SGAGERRGGAAVGGGEQPPPAPAPRRERRD--LPAE-PAAARGGG-------GGGGGGGG 89
+G G GG GGG +P P P E P G G GG GGGG
Sbjct: 736 NGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGG 795
Query: 90 GRGPQARARGG--GPGEPRGQQPASRGALPARALDPHPSPLITLETQDGYFSHRPKEKVR 147
G P GG G R + G PH P ++ G+ H
Sbjct: 796 GHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGG 855
Query: 148 TDSNNENSVPKDFENVDNSNFAPRTQKQKHQPELAKKPPSRQKELLKRKLEQQEKGKGHT 207
+ + VP H+ + PP + +GH
Sbjct: 856 PHGHRPHDVP------------------GHRGHDHRGPPPHEH-------------RGHD 884
Query: 208 FPGKGPGEVLPPGDRA-AANSSHGKDVSRPPHAR 240
PG G G G R SHG D+S P R
Sbjct: 885 GPGHGGG-----GHRGHDGGHSHGGDMSNRPVCR 913
Score = 32.0 bits (71), Expect = 2.8
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 8/69 (11%)
Query: 57 PPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGR---GPQARARGG-----GPGEPRGQ 108
PP P + + P P G GG GG G GP RGG GPG+P
Sbjct: 630 PPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRG 689
Query: 109 QPASRGALP 117
P G P
Sbjct: 690 GPMRGGPGP 698
Score = 31.2 bits (69), Expect = 4.9
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 28/78 (35%)
Query: 38 LDSGAGERR-----GGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRG 92
+ G+G R GG GGG +P P GG GG GG
Sbjct: 807 ISGGSGHRPHEGPGGGMGAGGGHRPHEGP--------------------GGSMGGSGGHR 846
Query: 93 PQARARGGGPGEPRGQQP 110
P G G G P G +P
Sbjct: 847 PH---EGPGHGGPHGHRP 861
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 48.5 bits (114), Expect = 3e-05
Identities = 34/86 (39%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 57 PPPAPAPRRE--------RRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEPRGQ 108
PPP A E LP P A GGGGGGGGGG GRGP G G G
Sbjct: 102 PPPLAASASEPGRYVRSWMEPLPGFPGGA-GGGGGGGGGGPGRGPSPGPSGPANGRHYGI 160
Query: 109 QPASRGA-LPARALDPHPSPLITLET 133
+P +R A PA A S +L +
Sbjct: 161 KPETRAAPAPATAASTTSSSSTSLSS 186
Score = 31.2 bits (69), Expect = 4.9
Identities = 37/148 (25%), Positives = 49/148 (33%), Gaps = 38/148 (25%)
Query: 41 GAGERRGGAAVGGGEQPPPAPAP---------RRERRDLPAEPAAARGGGGGGGG----- 86
GAG GG G G P P P+ + E R PA AA
Sbjct: 129 GAGGGGGGGGGGPGRGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSSSSTSLSSSS 188
Query: 87 ----------GGGGRGPQ-----------ARARGG-GPGEPRGQQPASRGALPARALDPH 124
G GP+ A A GG GPG G + G+ A H
Sbjct: 189 KRTECSVARESQGSSGPEFSCNSFLQEKAAAATGGTGPGAGIGAATGTGGSSEPSACSDH 248
Query: 125 PSPLITLETQDGYFSHRPKEKVRTDSNN 152
P P +L+ ++ H ++ + D NN
Sbjct: 249 PIPGCSLKEEEK--QHSQPQQQQLDPNN 274
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 47.8 bits (112), Expect = 5e-05
Identities = 42/121 (34%), Positives = 50/121 (41%), Gaps = 24/121 (19%)
Query: 4 APCARRLARRSHSALLAALTVLLLQT------LVVWNFSSLDSGAGERRGGAAVGGGEQP 57
AP R AR + + +L++ L + L A E RG A +
Sbjct: 91 APAPRERARGLRLRTVVGVAGVLVERDDLHALLAIQVIVQLLCAAAEARGAATL------ 144
Query: 58 PPAPAPRRERRDLPAEPAAAR---------GGGGGGGGGGGGRGPQARARGGGP-GEPRG 107
PA A D P A GGGGGGGGGGGGRG + R RGGG G PR
Sbjct: 145 -PAAAATTTALDGPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSR-RGRGGGERGGPRA 202
Query: 108 Q 108
Q
Sbjct: 203 Q 203
Score = 33.9 bits (76), Expect = 0.75
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 60 APAPRRERRDLPAEPA---AARGGGGGGGGGGGGRGPQARARGGGPGEPRGQQPASRG 114
A A R LPA A A G G GGG GG G + GGG G G + + RG
Sbjct: 134 AAAEARGAATLPAAAATTTALDGPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSRRG 191
>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
Length = 1519
Score = 47.8 bits (112), Expect = 5e-05
Identities = 52/165 (31%), Positives = 66/165 (40%), Gaps = 24/165 (14%)
Query: 58 PPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEPRGQQPASRGALP 117
PPA A P P RGGGGGG G GP R G G R ++ A RGAL
Sbjct: 336 PPAEAVGEASGSCPLRPGELRGGGGGGQ---GAEGPPGTPRRTGKGNRRKKRAAGRGAL- 391
Query: 118 ARALDPHPSPLITLETQDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRTQKQKH 177
+R D +PL + +D SH+ ++P E+ P K
Sbjct: 392 SRGGD--SAPLSPGDKEDA--SHQ---------EALGNLPSPSEHK-----LPECHLVKE 433
Query: 178 QPELAKKPPSRQKEL--LKRKLEQQEKGKGHTFPGKGPGEVLPPG 220
+ E + KP S KEL K Q + G T G G E+ PG
Sbjct: 434 EYEGSGKPESEPKELKTAGEKEPQLSEACGPTEEGAGERELEGPG 478
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 47.4 bits (111), Expect = 7e-05
Identities = 31/69 (44%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 49 AAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGG-GGGGGRGPQARARGGGPGEPRG 107
AA GGG P P A R P P A GGGG GG G G R A RGGG P G
Sbjct: 3 AAAGGGSCPGPGSARGR----FPGRPRGAGGGGGRGGRGNGAERVRVALRRGGGATGPGG 58
Query: 108 QQPASRGAL 116
+P AL
Sbjct: 59 AEPGEDTAL 67
Score = 31.2 bits (69), Expect = 4.9
Identities = 38/177 (21%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
Query: 55 EQPPPAPAPRRERRDLPAEPAAARGGGG---GGGGGGGGRGPQARARGGG-PGEPRGQQP 110
E PPP + + + G G GG GGRG + R RGGG P +
Sbjct: 251 EPPPPVVPVKHQTGSWKCKEGPGPGPGTPRRGGQSSRGGRGGRGRGRGGGLPFVIKFVSR 310
Query: 111 ASRGALPARALDPHPSPLITLETQDGYFSHR------PKEKVRTDSNNENSVPKDFENVD 164
A + + +L LE+ G H P+ +V + K + +D
Sbjct: 311 AKKVKMGQLSLG--------LESGQGQGQHEESWQDVPQRRVGSGQGGSPCWKKQEQKLD 362
Query: 165 NSNFAPRTQKQKHQPELAKKPPSRQKELLKRKLEQQEK--GKGHTFPGKGPGEVLPP 219
+ + +++K + K+ + +E++ +++ K T P P LPP
Sbjct: 363 DEEEEKKEEEEKDKEGEEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPPPLPP 419
Score = 30.8 bits (68), Expect = 6.3
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 21/120 (17%)
Query: 57 PPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARG----GGPGEPRGQQPAS 112
PPP APR + D A + G G GG R RG PGEP G++ S
Sbjct: 2292 PPPYKAPRLD-EDGEASEDTPQVPGLGSGGFSRVRMKTPTVRGVLDLDRPGEPAGEE--S 2348
Query: 113 RGALPARA-LDPHPS----------PLITLETQDGYFS---HRPKEKVRTDSNNENSVPK 158
G L R+ L P P P + LE+Q ++S +E+ + + EN PK
Sbjct: 2349 PGPLQERSPLLPLPEDGPPQVPDGPPDLLLESQWHHYSGEASSSEEEPPSPDDKENQAPK 2408
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 47.4 bits (111), Expect = 7e-05
Identities = 33/89 (37%), Positives = 34/89 (38%), Gaps = 21/89 (23%)
Query: 37 SLDSGAGERRGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQAR 96
SL AG GAA GGG A G GGGGG GGG GP
Sbjct: 124 SLALMAGAGGAGAAAGGG---------------------GAHDGPGGGGGPGGGGGPGGG 162
Query: 97 ARGGGPGEPRGQQPASRGALPARALDPHP 125
GGG G P G G L + PHP
Sbjct: 163 PGGGGGGGPGGGGGGPGGGLLGGSAHPHP 191
>gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
sapiens]
Length = 286
Score = 47.0 bits (110), Expect = 9e-05
Identities = 42/123 (34%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 4 APCARRLARRSHSALLAALTVLLLQT------LVVWNFSSLDSGAGERRGGAAVGGGEQP 57
AP R AR + + +L++ L + L A E RG A +
Sbjct: 91 APAPRERARGLRLRTVVGVAGVLVERDDLHALLAIQVIVQLLCAAAEARGAATL------ 144
Query: 58 PPAPAPRRERRDLPAEPAAAR-----------GGGGGGGGGGGGRGPQARARGGGP-GEP 105
PA A D P A GGGGGGGGGGGGRG + R RGGG G P
Sbjct: 145 -PAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSR-RGRGGGERGGP 202
Query: 106 RGQ 108
R Q
Sbjct: 203 RAQ 205
>gi|157743259 H6 family homeobox 3 [Homo sapiens]
Length = 357
Score = 46.6 bits (109), Expect = 1e-04
Identities = 55/204 (26%), Positives = 75/204 (36%), Gaps = 25/204 (12%)
Query: 52 GGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQ--ARARGGGPGEPRGQQ 109
G +PPP P P PA AAA G G A ++ G PR +
Sbjct: 39 GDHHRPPPKPQPPPRTLFAPASAAAAAAAAAAAAAKGALEGAAGFALSQVGDLAFPRFEI 98
Query: 110 PASRGALPARALDPHPS--PLITLETQDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSN 167
PA R ALPA L+ P+ TL G H P+ + + +S P D +
Sbjct: 99 PAQRFALPAHYLERSPAWWYPYTLTPAGG---HLPRPEASEKALLRDSSPA--SGTDRDS 153
Query: 168 FAPRTQKQKHQPELAKKPPSRQKELLKRKLEQQEKGKGHTFPGKGPGEVLPPGDRAAANS 227
P + EL K P + +L+ ++ K +G PG AA +
Sbjct: 154 PEPLLKADPDHKELDSKSP--DEIILEESDSEESKKEGEAAPG-------------AAGA 198
Query: 228 SHGKDVSRP-PHARKTGGSSPETK 250
S G + P K G SPE K
Sbjct: 199 SVGAAAATPGAEDWKKGAESPEKK 222
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 46.6 bits (109), Expect = 1e-04
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 25/88 (28%)
Query: 53 GGEQPPPAPAPRRERRDLPAE----PAAARGGGGGGGGGGGG------------------ 90
GG +P P P RE +P++ P GGGGGG GGG G
Sbjct: 136 GGRRPGPPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGAGGGSGEREGGAPQPPPPRG 195
Query: 91 ---RGPQARARGGGPGEPRGQQPASRGA 115
+G +A+ RGG GE P+S A
Sbjct: 196 WRGKGVRAQQRGGSGGEGASPSPSSSSA 223
Score = 35.0 bits (79), Expect = 0.34
Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 14/69 (20%)
Query: 41 GAGERRGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGG------GGGGGGGGGRGPQ 94
G G GGA G GE+ AP P P RG G GG GG G P
Sbjct: 168 GGGGEGGGAGGGSGEREGGAPQ--------PPPPRGWRGKGVRAQQRGGSGGEGASPSPS 219
Query: 95 ARARGGGPG 103
+ + G PG
Sbjct: 220 SSSAGKTPG 228
Score = 30.8 bits (68), Expect = 6.3
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 84 GGGGGGGRGPQARARGGGPGEPRGQQPASRGALPARALDP----HPSPLITLETQDGYFS 139
G G GP A RGGG G + A +GA P A+ P +P TL G
Sbjct: 82 GNKTGSRTGPPASIRGGGGGAEKATPLAPKGAAPG-AVQPVAGAEAAPAATLAALGGRRP 140
Query: 140 HRPKEKVR 147
P+E R
Sbjct: 141 GPPEEPPR 148
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 46.6 bits (109), Expect = 1e-04
Identities = 35/93 (37%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 40 SGAGERR-GGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGG---GGGGGRGPQA 95
SGAG R G AA GG PP P R+D P A RGG G G GRG
Sbjct: 407 SGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDP 466
Query: 96 RARGGGPGEPRGQQPASRGALPARALDPHPSPL 128
GG R + RG L + PH PL
Sbjct: 467 ----GGGSRARRRAARGRGCLRSARSSPHARPL 495
Score = 37.4 bits (85), Expect = 0.068
Identities = 64/230 (27%), Positives = 76/230 (33%), Gaps = 55/230 (23%)
Query: 41 GAGERRGGAAVGGGEQPPPAPA-----------PRRERRDLPAEPAAARGGGG------- 82
GAG GAA G AP P+ R L AAAR G
Sbjct: 232 GAGRAGAGAAACGRRGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGF 291
Query: 83 -----GGGGGGGGRGPQARARGGGPGEPRGQ--QPASRGALPARALDPHPSPLIT--LET 133
G GG GRG + G G RG QPAS AL AR P T E
Sbjct: 292 SGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQPASTWALAAR---PRAGGTWTSRFEA 348
Query: 134 QDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRTQKQKHQPELAKKPPSRQKELL 193
Q G + + R + N S P + PR Q+ + P S Q+E
Sbjct: 349 QRGCAHQDGQRRTRDGAGNHASEPARVWSP-----PPRRQRPRRLPR-----ASLQEEPK 398
Query: 194 KRKLEQQEKGKGHTFPGKGPGEVLPPGDRAAANSSHGKDVSRPPHARKTG 243
+R + G G P + P G PPHAR TG
Sbjct: 399 RRPPCARPSGAG---PAREGPAAWPGG------------APTPPHARPTG 433
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 46.6 bits (109), Expect = 1e-04
Identities = 35/93 (37%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 40 SGAGERR-GGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGG---GGGGGRGPQA 95
SGAG R G AA GG PP P R+D P A RGG G G GRG
Sbjct: 407 SGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDP 466
Query: 96 RARGGGPGEPRGQQPASRGALPARALDPHPSPL 128
GG R + RG L + PH PL
Sbjct: 467 ----GGGSRARRRAARGRGCLRSARSSPHARPL 495
Score = 37.4 bits (85), Expect = 0.068
Identities = 64/230 (27%), Positives = 76/230 (33%), Gaps = 55/230 (23%)
Query: 41 GAGERRGGAAVGGGEQPPPAPA-----------PRRERRDLPAEPAAARGGGG------- 82
GAG GAA G AP P+ R L AAAR G
Sbjct: 232 GAGRAGAGAAACGRRGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGF 291
Query: 83 -----GGGGGGGGRGPQARARGGGPGEPRGQ--QPASRGALPARALDPHPSPLIT--LET 133
G GG GRG + G G RG QPAS AL AR P T E
Sbjct: 292 SGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQPASTWALAAR---PRAGGTWTSRFEA 348
Query: 134 QDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRTQKQKHQPELAKKPPSRQKELL 193
Q G + + R + N S P + PR Q+ + P S Q+E
Sbjct: 349 QRGCAHQDGQRRTRDGAGNHASEPARVWSP-----PPRRQRPRRLPR-----ASLQEEPK 398
Query: 194 KRKLEQQEKGKGHTFPGKGPGEVLPPGDRAAANSSHGKDVSRPPHARKTG 243
+R + G G P + P G PPHAR TG
Sbjct: 399 RRPPCARPSGAG---PAREGPAAWPGG------------APTPPHARPTG 433
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,769,917
Number of Sequences: 37866
Number of extensions: 2355376
Number of successful extensions: 29369
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 741
Number of HSP's that attempted gapping in prelim test: 16451
Number of HSP's gapped (non-prelim): 7005
length of query: 959
length of database: 18,247,518
effective HSP length: 112
effective length of query: 847
effective length of database: 14,006,526
effective search space: 11863527522
effective search space used: 11863527522
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.