GCNT1 13463

Name: GCNT1	Sequence: fasta or formatted (428aa)		NCBI GI: 21614523
Description: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase		Referenced in: Protein Glycosylation
Other entries for this name: alt mRNA [428aa] beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylgluc... alt mRNA [428aa] beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylgluc... alt mRNA [428aa] beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylgluc... alt mRNA [428aa] beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylgluc...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 23 2 C cysteine 2.1 9 1 D aspartate 5.1 22 2 E glutamate 6.5 28 2 F phenylalanine 4.4 19 1 G glycine 3.5 15 1 H histidine 3.0 13 2 I isoleucine 5.1 22 1 K lysine 7.5 32 2 L leucine 10.5 45 2 M methionine 3.5 15 1 N asparagine 4.0 17 2 P proline 4.7 20 2 Q glutamine 2.8 12 1 R arginine 5.6 24 3 S serine 7.0 30 2 T threonine 4.0 17 1 V valine 8.4 36 2 W tryptophan 1.9 8 1 Y tyrosine 4.9 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6... GCNT1 1.000 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... GCNT1 1.000 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... GCNT1 1.000 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... GCNT1 1.000 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,... GCNT3 0.492 glucosaminyl (N-acetyl) transferase 3, mucin type [Ho... GCNT4 0.354 core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Ho... GCNT2 0.306 glucosaminyl (N-acetyl) transferase 2, I-branching en... GCNT2 0.298 glucosaminyl (N-acetyl) transferase 2, I-branching e... GCNT2 0.289 glucosaminyl (N-acetyl) transferase 2, I-branching e... GCNT7 0.252 glucosaminyl (N-acetyl) transferase family member 7... GCNT6 0.176 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... GCNT6 0.176 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... GCNT6 0.176 PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H... XYLT2 0.059 xylosyltransferase II XYLT1 0.052 xylosyltransferase I PAXIP1 0.008 PAX interacting protein 1 TRIM60 0.006 ring finger protein 129 ITSN2 0.006 intersectin 2 isoform 1 ITSN2 0.006 intersectin 2 isoform 2 DNAH5 0.005 dynein, axonemal, heavy chain 5 FER1L5 0.005 fer-1-like 5 isoform 2 FER1L5 0.005 fer-1-like 5 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.