Guide to the Human Genome
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Name: XYLT2 Sequence: fasta or formatted (865aa) NCBI GI: 110611246
Description:

xylosyltransferase II

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         71           3
 C cysteine            1.6         14           1
 D aspartate           5.2         45           2
 E glutamate           5.4         47           2
 F phenylalanine       3.8         33           2
 G glycine             7.3         63           2
 H histidine           2.5         22           2
 I isoleucine          2.2         19           1
 K lysine              3.7         32           2
 L leucine            10.9         94           3
 M methionine          1.6         14           1
 N asparagine          2.5         22           2
 P proline             7.9         68           3
 Q glutamine           4.9         42           2
 R arginine            7.6         66           2
 S serine              6.8         59           2
 T threonine           5.4         47           1
 V valine              6.9         60           2
 W tryptophan          2.5         22           1
 Y tyrosine            2.9         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   xylosyltransferase II 
XYLT1                 0.526   xylosyltransferase I 
GCNT2                 0.034   glucosaminyl (N-acetyl) transferase 2, I-branching en...
GCNT2                 0.034   glucosaminyl (N-acetyl) transferase 2, I-branching e...
GCNT2                 0.032   glucosaminyl (N-acetyl) transferase 2, I-branching e...
GCNT4                 0.031   core 2 beta-1,6-N-acetylglucosaminyltransferase 3 [Ho...
GCNT1                 0.028   beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...
GCNT1                 0.028   beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...
GCNT1                 0.028   beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...
GCNT1                 0.028   beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...
GCNT1                 0.028   beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6...
GCNT3                 0.028   glucosaminyl (N-acetyl) transferase 3, mucin type [Ho...
GCNT7                 0.026   glucosaminyl (N-acetyl) transferase family member 7...
GCNT6                 0.018   PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H...
GCNT6                 0.018   PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H...
GCNT6                 0.018   PREDICTED: glucosaminyl (N-acetyl) transferase 6 [H...
COL11A2               0.011   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.011   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.011   collagen, type XI, alpha 2 isoform 1 preproprotein ...
COLEC12               0.008   collectin sub-family member 12 
COL1A1                0.008   alpha 1 type I collagen preproprotein 
COL4A5                0.008   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.008   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.008   type IV collagen alpha 5 isoform 3 precursor 
DNMT3A                0.008   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
DNMT3A                0.008   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
ZFP91                 0.008   zinc finger protein 91 
COL1A2                0.007   alpha 2 type I collagen 
EHMT2                 0.007   euchromatic histone-lysine N-methyltransferase 2 is...
DACT3                 0.007   thymus expressed gene 3-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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