Guide to the Human Genome
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Search of human proteins with 27902281

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]
         (188 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]           390   e-109
gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens]           352   8e-98
gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo ...   342   1e-94
gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo sap...   342   1e-94
gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo sap...   335   1e-92
gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo sap...   325   1e-89
gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo sapi...   323   7e-89
gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo sa...   323   7e-89
gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo sap...   305   2e-83
gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens]            302   1e-82
gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]           291   2e-79
gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo sap...   276   8e-75
gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo sap...   270   7e-73
gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo sap...   182   1e-46
gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo sa...   182   1e-46
gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo ...    94   9e-20
gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]           80   1e-15
gi|147905620 PR domain containing 9 [Homo sapiens]                     79   2e-15
gi|48717241 zinc finger protein 425 [Homo sapiens]                     52   3e-07
gi|25777704 zinc finger 398 isoform a [Homo sapiens]                   42   3e-04
gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo ...    41   5e-04
gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo ...    41   5e-04
gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo ...    41   5e-04
gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo ...    41   5e-04
gi|41152070 zinc finger protein 75 [Homo sapiens]                      41   7e-04
gi|118918411 zinc finger protein 777 [Homo sapiens]                    40   0.002
gi|152963633 zinc finger protein 30 isoform b [Homo sapiens]           39   0.002
gi|210147475 zinc finger protein 92 homolog [Homo sapiens]             38   0.004
gi|170932473 zinc finger protein 786 [Homo sapiens]                    38   0.004
gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens]           38   0.004

>gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]
          Length = 188

 Score =  390 bits (1003), Expect = e-109
 Identities = 188/188 (100%), Positives = 188/188 (100%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK
Sbjct: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG
Sbjct: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180

Query: 181 SDPEEDDE 188
           SDPEEDDE
Sbjct: 181 SDPEEDDE 188


>gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens]
          Length = 188

 Score =  352 bits (904), Expect = 8e-98
 Identities = 172/188 (91%), Positives = 175/188 (93%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFARRPRAG+QIPEKIQK+FDDIAKYFSKKEWEKMKS EKI YVYMKRKYEAMTK
Sbjct: 1   MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFKATLPPFM NTGATDLQGNDFDNDRN  NQVER QMTF RLQ IFPKIMPKKPAE G
Sbjct: 61  LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           NDSK VPEASG QNDGK LCPPGKP+TSEKINK SGPKRGKHAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI 180

Query: 181 SDPEEDDE 188
           SDPEEDDE
Sbjct: 181 SDPEEDDE 188


>gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo
           sapiens]
          Length = 188

 Score =  342 bits (876), Expect = 1e-94
 Identities = 164/188 (87%), Positives = 172/188 (91%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFARRP  G+QIPEKIQKAFDDIAKYFSK+EWEKMK+SEKI YVYMKRKYEAMTK
Sbjct: 1   MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFKATLPPFMCN  A D QGND DND N  NQVER QMTFGRLQGI PKIMPKKPAE G
Sbjct: 61  LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           NDS+EVPEASG QNDGK+LCPPGKPTTSEKI++ SGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180

Query: 181 SDPEEDDE 188
           SDPEEDDE
Sbjct: 181 SDPEEDDE 188


>gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo
           sapiens]
          Length = 188

 Score =  342 bits (876), Expect = 1e-94
 Identities = 164/188 (87%), Positives = 172/188 (91%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFARRP  G+QIPEKIQKAFDDIAKYFSK+EWEKMK+SEKI YVYMKRKYEAMTK
Sbjct: 1   MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFKATLPPFMCN  A D QGND DND N  NQVER QMTFGRLQGI PKIMPKKPAE G
Sbjct: 61  LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           NDS+EVPEASG QNDGK+LCPPGKPTTSEKI++ SGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180

Query: 181 SDPEEDDE 188
           SDPEEDDE
Sbjct: 181 SDPEEDDE 188


>gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo
           sapiens]
          Length = 188

 Score =  335 bits (860), Expect = 1e-92
 Identities = 163/188 (86%), Positives = 168/188 (89%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDD FARRP  G+QIPEKIQKAFDDIAKYFSK+EWEKMK SEKI+YVYMKRKYEAMTK
Sbjct: 1   MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFKA LP FM N   TD QGNDFDND N  NQV+R QMTFGRLQGIFPKIMPKKPAE G
Sbjct: 61  LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           N SKEVPEASG QNDGKQLCPPGKPTTSEKIN  SGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGPKRGEHAWTHRLRERKQLVIYEEI 180

Query: 181 SDPEEDDE 188
           SDPEEDDE
Sbjct: 181 SDPEEDDE 188


>gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo
           sapiens]
          Length = 188

 Score =  325 bits (833), Expect = 1e-89
 Identities = 158/188 (84%), Positives = 166/188 (88%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAF RRPR GSQIPEK+QKAFDDIAKYFS+KEWEKMK+SEKIIYVYMKRKYEAMTK
Sbjct: 1   MNGDDAFVRRPRVGSQIPEKMQKAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFKATLPPFM N    D QGNDFDND N  NQVE  QMTFGRLQGIFPKI P+KPAE G
Sbjct: 61  LGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEG 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           NDSK VPEASG QN+GKQL P GK  TSEK+NK SGPKRGKHAWTHR+RERKQLVIYEEI
Sbjct: 121 NDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEI 180

Query: 181 SDPEEDDE 188
           SDP+EDDE
Sbjct: 181 SDPQEDDE 188


>gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo
           sapiens]
          Length = 188

 Score =  323 bits (827), Expect = 7e-89
 Identities = 156/188 (82%), Positives = 163/188 (86%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFARRPR  +QI EK++KAFDDIAKYFSKKEWEKMKSSEKI+YVYMK  YE MTK
Sbjct: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFK TLPPFM +  A D  GNDF NDRNHRNQVER QMTFG LQ IFPKIMPKKPAE  
Sbjct: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           N  KEVPEASG QNDGKQLCPPG P+T EKINK SGPKRGKHAWTHRLRERKQLV+YEEI
Sbjct: 121 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI 180

Query: 181 SDPEEDDE 188
           SDPEEDDE
Sbjct: 181 SDPEEDDE 188


>gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo
           sapiens]
          Length = 188

 Score =  323 bits (827), Expect = 7e-89
 Identities = 156/188 (82%), Positives = 163/188 (86%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFARRPR  +QI EK++KAFDDIAKYFSKKEWEKMKSSEKI+YVYMK  YE MTK
Sbjct: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFK TLPPFM +  A D  GNDF NDRNHRNQVER QMTFG LQ IFPKIMPKKPAE  
Sbjct: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           N  KEVPEASG QNDGKQLCPPG P+T EKINK SGPKRGKHAWTHRLRERKQLV+YEEI
Sbjct: 121 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI 180

Query: 181 SDPEEDDE 188
           SDPEEDDE
Sbjct: 181 SDPEEDDE 188


>gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo
           sapiens]
          Length = 229

 Score =  305 bits (781), Expect = 2e-83
 Identities = 158/229 (68%), Positives = 166/229 (72%), Gaps = 41/229 (17%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQK------------------------------------- 23
           MNGDDAF RRPR GSQIPEK+QK                                     
Sbjct: 1   MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60

Query: 24  ----AFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTKLGFKATLPPFMCNTGATDL 79
               AFDDIAKYFS+KEWEKMK+SEKIIYVYMKRKYEAMTKLGFKATLPPFM N    D 
Sbjct: 61  GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120

Query: 80  QGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVGNDSKEVPEASGLQNDGKQL 139
           QGNDFDND N  NQVE  QMTFGRLQGIFPKI P+KPAE GNDSK VPEASG QN+GKQL
Sbjct: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180

Query: 140 CPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEISDPEEDDE 188
            P GK  TSEK+NK SGPKRGKHAWTHR+RERKQLVIYEEISDP+EDDE
Sbjct: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229


>gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens]
          Length = 188

 Score =  302 bits (774), Expect = 1e-82
 Identities = 150/188 (79%), Positives = 155/188 (82%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDD FA+RPR  ++  EK  KAFDDIA YFSKKEW+KMK SEKI YVYMKR Y+AMTK
Sbjct: 1   MNGDDTFAKRPRDDAKASEKRSKAFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFK TLPPFMCN  ATD QGNDFDND N R QVE  QMTFGRL  I PKIMPKKPAE  
Sbjct: 61  LGFKVTLPPFMCNKQATDFQGNDFDNDHNRRIQVEHPQMTFGRLHRIIPKIMPKKPAEDE 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           NDSK V EASG QNDGKQL PPGK   SEKINK SGPKRGKHAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSKGVSEASGPQNDGKQLHPPGKANISEKINKRSGPKRGKHAWTHRLRERKQLVIYEEI 180

Query: 181 SDPEEDDE 188
           SDPEEDDE
Sbjct: 181 SDPEEDDE 188


>gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]
          Length = 188

 Score =  291 bits (746), Expect = 2e-79
 Identities = 145/188 (77%), Positives = 159/188 (84%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFA+RPR  ++  EK  KAFDDIAKYFSK+EWEKMK SEKI  V+MKRKYEAMTK
Sbjct: 1   MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGF  TL  FM N  ATD Q ND DNDRN  N+VER QMTFGRLQ I PKIMP+KPAE G
Sbjct: 61  LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
           +DSK VPEASG QNDGK+LCPPGK ++SEKI++ SGPKRGKHAWTHRLRERKQLVIYEEI
Sbjct: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180

Query: 181 SDPEEDDE 188
           SDPEEDD+
Sbjct: 181 SDPEEDDK 188


>gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo
           sapiens]
          Length = 223

 Score =  276 bits (706), Expect = 8e-75
 Identities = 133/161 (82%), Positives = 142/161 (88%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFARRP  G+QIPEKIQKAFDDIAKYFSK+EWEKMK+SEKI YVYMKRKYEAMTK
Sbjct: 1   MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFKATLPPFMCN  A D QGND DND N  NQVER QMTFGRLQGI PKIMPKKPAE G
Sbjct: 61  LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGK 161
           NDS+EVPEASG QNDGK+LCPPGKPTTSEKI++ SG +  +
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGNREAQ 161


>gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo
           sapiens]
          Length = 170

 Score =  270 bits (689), Expect = 7e-73
 Identities = 132/156 (84%), Positives = 136/156 (87%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDD FARRP  G+QIPEKIQKAFDDIAKYFSK+EWEKMK SEKI+YVYMKRKYEAMTK
Sbjct: 1   MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
           LGFKA LP FM N   TD QGNDFDND N  NQV+R QMTFGRLQGIFPKIMPKKPAE G
Sbjct: 61  LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120

Query: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASG 156
           N SKEVPEASG QNDGKQLCPPGKPTTSEKIN  SG
Sbjct: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156


>gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo
           sapiens]
          Length = 153

 Score =  182 bits (463), Expect = 1e-46
 Identities = 88/110 (80%), Positives = 93/110 (84%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFARRPR  +QI EK++KAFDDIAKYFSKKEWEKMKSSEKI+YVYMK  YE MTK
Sbjct: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPK 110
           LGFK TLPPFM +  A D  GNDF NDRNHRNQVER QMTFG LQ IFPK
Sbjct: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110


>gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo
           sapiens]
          Length = 153

 Score =  182 bits (463), Expect = 1e-46
 Identities = 88/110 (80%), Positives = 93/110 (84%)

Query: 1   MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
           MNGDDAFARRPR  +QI EK++KAFDDIAKYFSKKEWEKMKSSEKI+YVYMK  YE MTK
Sbjct: 1   MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60

Query: 61  LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPK 110
           LGFK TLPPFM +  A D  GNDF NDRNHRNQVER QMTFG LQ IFPK
Sbjct: 61  LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110


>gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo
           sapiens]
          Length = 102

 Score = 93.6 bits (231), Expect = 9e-20
 Identities = 48/66 (72%), Positives = 50/66 (75%)

Query: 94  VERSQMTFGRLQGIFPKIMPKKPAEVGNDSKEVPEASGLQNDGKQLCPPGKPTTSEKINK 153
           VE  QMTFGRL  I PKIMPKKPAE  NDSK V EASG QNDGKQL PPGK   SEKINK
Sbjct: 37  VEHPQMTFGRLHRIIPKIMPKKPAEDENDSKGVSEASGPQNDGKQLHPPGKANISEKINK 96

Query: 154 ASGPKR 159
            SG ++
Sbjct: 97  RSGKRK 102


>gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]
          Length = 492

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 13/179 (7%)

Query: 21  IQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTKLGFKATLPPFMCN-TGATDL 79
           ++ AF DI+ YF+K+EW +M   EK  Y  +K  Y A+  +G +AT P FMC+   A  L
Sbjct: 24  VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKL 83

Query: 80  Q---GNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVGNDSKEVPEASGLQNDG 136
           Q     D D +   R QV+   M F   Q    K MPK      +  +E+     L N  
Sbjct: 84  QVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMPKASFNNESSLRELSGTPNLLNTS 143

Query: 137 ------KQLCPPGKPTTSEKINKASGPKRGK--HAWTHRLRERKQLVIYEEISDPEEDD 187
                 K + PPG+ +TS + ++     R K      + LRERK    Y+EIS+P++DD
Sbjct: 144 DSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKGHA-YKEISEPQDDD 201


>gi|147905620 PR domain containing 9 [Homo sapiens]
          Length = 894

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 61/179 (34%), Positives = 89/179 (49%), Gaps = 13/179 (7%)

Query: 21  IQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTKLGFKATLPPFMCN-TGATDL 79
           ++ AF DI+ YF+K+EW +M   EK  Y  +KR Y A+  +G +AT P FMC+   A  L
Sbjct: 24  VKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKRNYNALITIGLRATRPAFMCHRRQAIKL 83

Query: 80  Q---GNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVGNDSKEVP------EAS 130
           Q     D D +   R QV+   M     Q    K MPK      +  KE+        AS
Sbjct: 84  QVDDTEDSDEEWTPRQQVKPPWMALRVEQRKHQKGMPKASFSNESSLKELSRTANLLNAS 143

Query: 131 GLQNDGKQLCPPGKPTTSEKINKASGPKRGKHA--WTHRLRERKQLVIYEEISDPEEDD 187
           G +   K + P G+ +TS + ++     R K      + LRERK    Y+E+S+P++DD
Sbjct: 144 GSEQAQKPVSPSGEASTSGQHSRLKLELRKKETERKMYSLRERKGHA-YKEVSEPQDDD 201


>gi|48717241 zinc finger protein 425 [Homo sapiens]
          Length = 752

 Score = 52.0 bits (123), Expect = 3e-07
 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 30/161 (18%)

Query: 18  PEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVY-MKRKYEAMTKLGFKATLPPFMCNTGA 76
           P  +   FDD+A YFS++EWE ++  +K +Y   MK  YE +  LG+  + P  +     
Sbjct: 4   PASVTVTFDDVALYFSEQEWEILEKWQKQMYKQEMKTNYETLDSLGYAFSKPDLI----- 58

Query: 77  TDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVGNDSKEVPEASGLQNDG 136
                            +E+ +M     QG   K            S    E   ++N G
Sbjct: 59  ---------------TWMEQGRMLLISEQGCLDKTR-------RTTSPPTDEQLNMKNTG 96

Query: 137 KQLC--PPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLV 175
           K LC    G P T E+  + +GP++       R +ERK L+
Sbjct: 97  KLLCFDDEGTPRTKEEDCRLNGPQKQDLCAALRGKERKILL 137


>gi|25777704 zinc finger 398 isoform a [Homo sapiens]
          Length = 642

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 11  PRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYV-YMKRKYEAMTKLGFKATLP 68
           P     IP K+  AFDD++ YFS  EWEK++  +K +Y   MK  YE++  + +    P
Sbjct: 132 PGIKGDIP-KVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAINQP 189


>gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo
           sapiens]
          Length = 546

 Score = 41.2 bits (95), Expect = 5e-04
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 9   RRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVY-MKRKYEAMTKLGFKATL 67
           R P        K+   FDD+A YFS+ EW K++  +K +Y + M+  YE +  L +  + 
Sbjct: 129 RLPPGSKGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISK 188

Query: 68  PPFM 71
           P  +
Sbjct: 189 PDIL 192


>gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo
           sapiens]
          Length = 546

 Score = 41.2 bits (95), Expect = 5e-04
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 9   RRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVY-MKRKYEAMTKLGFKATL 67
           R P        K+   FDD+A YFS+ EW K++  +K +Y + M+  YE +  L +  + 
Sbjct: 129 RLPPGSKGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISK 188

Query: 68  PPFM 71
           P  +
Sbjct: 189 PDIL 192


>gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo
           sapiens]
          Length = 546

 Score = 41.2 bits (95), Expect = 5e-04
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 9   RRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVY-MKRKYEAMTKLGFKATL 67
           R P        K+   FDD+A YFS+ EW K++  +K +Y + M+  YE +  L +  + 
Sbjct: 129 RLPPGSKGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISK 188

Query: 68  PPFM 71
           P  +
Sbjct: 189 PDIL 192


>gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo
           sapiens]
          Length = 546

 Score = 41.2 bits (95), Expect = 5e-04
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 9   RRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVY-MKRKYEAMTKLGFKATL 67
           R P        K+   FDD+A YFS+ EW K++  +K +Y + M+  YE +  L +  + 
Sbjct: 129 RLPPGSKGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISK 188

Query: 68  PPFM 71
           P  +
Sbjct: 189 PDIL 192


>gi|41152070 zinc finger protein 75 [Homo sapiens]
          Length = 510

 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 26/155 (16%)

Query: 17  IPEKIQK-AFDDIAKYFSKKEWEKMKSSEKIIY-VYMKRKYEAMTKLGFKA---TLPPFM 71
           +PE +    F+D+A YFS++EW+ +   EK +Y   M+  YE +  LG K    T     
Sbjct: 228 LPESLSLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHP 287

Query: 72  CNTGATDLQGNDFDNDRNHRNQVERSQMTFGR-----------LQGIFPKIMPKKPAEVG 120
            +   +++Q +  +  +  R ++  +Q T GR               FP+   KKPA   
Sbjct: 288 ISVSTSEIQTSGCEVSKKTRMKI--AQKTMGRENPGDTHSVQKWHRAFPRKKRKKPATC- 344

Query: 121 NDSKEVPEASGLQNDGKQLCPPG-KPTTSEKINKA 154
              +E+P+   L   G    P G KP   ++  K+
Sbjct: 345 --KQELPKLMDLHGKG----PTGEKPFKCQECGKS 373


>gi|118918411 zinc finger protein 777 [Homo sapiens]
          Length = 831

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 11  PRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYV-YMKRKYEAMTKLGFKATLPP 69
           P +  ++P K+   FDD+A +FS++EW  +   +K +Y   M+  YE++  + +  + P 
Sbjct: 274 PGSNGEVP-KVPVTFDDVAVHFSEQEWGNLSEWQKELYKNVMRGNYESLVSMDYAISKPD 332

Query: 70  FM 71
            M
Sbjct: 333 LM 334


>gi|152963633 zinc finger protein 30 isoform b [Homo sapiens]
          Length = 623

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 42/173 (24%), Positives = 65/173 (37%), Gaps = 36/173 (20%)

Query: 25  FDDIAKYFSKKEWEKMKSSEKIIY-VYMKRKYEAMTKLGFKATLPPFMC----------- 72
           F+D+A  FS++EWE + SS++ +Y   M   Y  +  +G   + P  +            
Sbjct: 16  FEDVAIAFSQQEWESLDSSQRGLYRDVMLENYRNLVSMGHSRSKPHVIALLEQWKEPEVT 75

Query: 73  -----NTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVGNDSKEVP 127
                    TDLQ  D D           +  +F     +  KI  +KP E         
Sbjct: 76  VRKDGRRWCTDLQLED-DTIGCKEMPTSENCPSF----ALHQKISRQKPRE--------- 121

Query: 128 EASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
                Q  GK LC   KP   E+I+ +  P R K    +      QL I++ +
Sbjct: 122 ----CQEYGKTLCQDSKPVQHERIHSSEKPNRCKECGKN-FSNGHQLTIHQRL 169


>gi|210147475 zinc finger protein 92 homolog [Homo sapiens]
          Length = 416

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 20 KIQKAFDDIAKYFSKKEWEKMKSSEKIIYV-YMKRKYEAMTKLGFKATLP 68
          K+  +F+D++ YF+K EW+ +   +K++Y   M   Y  +  LGF  + P
Sbjct: 11 KVPVSFEDVSVYFTKTEWKLLDLRQKVLYKRVMLENYSHLVSLGFSFSKP 60


>gi|170932473 zinc finger protein 786 [Homo sapiens]
          Length = 782

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 18 PEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVY-MKRKYEAMTKL 61
          P ++   F+D+A YFS++EW+ +++ +K +Y + M+  YE +  L
Sbjct: 4  PPRLPLTFEDVAIYFSEQEWQDLEAWQKELYKHVMRSNYETLVSL 48


>gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens]
          Length = 425

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 24 AFDDIAKYFSKKEWEKMKSSEKIIY-VYMKRKYEAMTKLGFKATLPPFMCNTGATDLQ 80
          +F+D+A YF+++EW  +   +K +Y   M   Y  M  LGF+   P  +C     D Q
Sbjct: 12 SFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLGFQFPKPEMICQLENWDEQ 69


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.132    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,140,113
Number of Sequences: 37866
Number of extensions: 360178
Number of successful extensions: 1344
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 1185
Number of HSP's gapped (non-prelim): 252
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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