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Search of human proteins with 27735113
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27735113 EF-hand calcium binding domain 3 isoform b [Homo
sapiens]
(438 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222418696 EF-hand calcium binding domain 3 isoform a [Homo sa... 895 0.0
gi|27735113 EF-hand calcium binding domain 3 isoform b [Homo sap... 895 0.0
gi|169171895 PREDICTED: similar to EF-hand calcium binding domai... 284 1e-76
gi|38348382 spermatogenesis associated 21 [Homo sapiens] 82 1e-15
gi|46397403 centrin 3 [Homo sapiens] 56 6e-08
gi|4757902 caltractin [Homo sapiens] 48 2e-05
gi|58218968 calmodulin 3 [Homo sapiens] 46 6e-05
gi|4502549 calmodulin 2 [Homo sapiens] 46 6e-05
gi|5901912 calmodulin 1 [Homo sapiens] 46 6e-05
gi|4885111 calmodulin-like 3 [Homo sapiens] 46 8e-05
gi|4757974 centrin 1 [Homo sapiens] 45 2e-04
gi|223278387 calmodulin-like 5 [Homo sapiens] 41 0.002
gi|194097352 actinin, alpha 1 isoform c [Homo sapiens] 39 0.012
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens] 36 0.079
gi|4501893 actinin, alpha 2 [Homo sapiens] 35 0.10
gi|11067753 calcium binding protein 5 [Homo sapiens] 35 0.10
gi|217035144 EF-hand calcium binding domain 7 [Homo sapiens] 34 0.30
gi|110227596 calmodulin-like 4 isoform 2 [Homo sapiens] 34 0.30
gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens] 34 0.30
gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo ... 33 0.39
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 33 0.39
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo... 33 0.51
gi|20149675 EF-hand domain family, member D2 [Homo sapiens] 33 0.51
gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo... 33 0.51
gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo... 33 0.51
gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo ... 33 0.51
gi|32698884 calcium binding protein 7 [Homo sapiens] 33 0.67
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 33 0.67
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi... 33 0.67
gi|50897266 calmodulin-like 6 [Homo sapiens] 33 0.67
>gi|222418696 EF-hand calcium binding domain 3 isoform a [Homo
sapiens]
Length = 490
Score = 895 bits (2314), Expect = 0.0
Identities = 438/438 (100%), Positives = 438/438 (100%)
Query: 1 MAVSEIKPKLKLNPLTKVPISHNKRDRDLPGSLQCQLQHKEKKLSASQMAAFQDAYNFFY 60
MAVSEIKPKLKLNPLTKVPISHNKRDRDLPGSLQCQLQHKEKKLSASQMAAFQDAYNFFY
Sbjct: 53 MAVSEIKPKLKLNPLTKVPISHNKRDRDLPGSLQCQLQHKEKKLSASQMAAFQDAYNFFY 112
Query: 61 KDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLTDKNLFLK 120
KDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLTDKNLFLK
Sbjct: 113 KDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLTDKNLFLK 172
Query: 121 AVVPEKETCLDLAGNPGILLFEILSRLLETSALPRKSIIEIVSYFQRKFQHTGPGMLWSP 180
AVVPEKETCLDLAGNPGILLFEILSRLLETSALPRKSIIEIVSYFQRKFQHTGPGMLWSP
Sbjct: 173 AVVPEKETCLDLAGNPGILLFEILSRLLETSALPRKSIIEIVSYFQRKFQHTGPGMLWSP 232
Query: 181 YTMGYGKRTLKPDICTPPSSSMAAFANAARIAIMKEKDLFKFLEELKRCNSGSDSPYSKI 240
YTMGYGKRTLKPDICTPPSSSMAAFANAARIAIMKEKDLFKFLEELKRCNSGSDSPYSKI
Sbjct: 233 YTMGYGKRTLKPDICTPPSSSMAAFANAARIAIMKEKDLFKFLEELKRCNSGSDSPYSKI 292
Query: 241 PIFPLFPNVDGVVMGKPFKDMQKLEMLRIKEPLHFFEDYFFHKRDWKTQAANIKSMDPAS 300
PIFPLFPNVDGVVMGKPFKDMQKLEMLRIKEPLHFFEDYFFHKRDWKTQAANIKSMDPAS
Sbjct: 293 PIFPLFPNVDGVVMGKPFKDMQKLEMLRIKEPLHFFEDYFFHKRDWKTQAANIKSMDPAS 352
Query: 301 GYSNNIFTIDQMLKKKQTCTVADATAIKQHVKRATDTYNLGIALEHRKEMLNLWQKIRGD 360
GYSNNIFTIDQMLKKKQTCTVADATAIKQHVKRATDTYNLGIALEHRKEMLNLWQKIRGD
Sbjct: 353 GYSNNIFTIDQMLKKKQTCTVADATAIKQHVKRATDTYNLGIALEHRKEMLNLWQKIRGD 412
Query: 361 LIGMDSRNESFYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHNSRSSSSSDTSEC 420
LIGMDSRNESFYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHNSRSSSSSDTSEC
Sbjct: 413 LIGMDSRNESFYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHNSRSSSSSDTSEC 472
Query: 421 YTDSGRKRKRKGLKGFQQ 438
YTDSGRKRKRKGLKGFQQ
Sbjct: 473 YTDSGRKRKRKGLKGFQQ 490
>gi|27735113 EF-hand calcium binding domain 3 isoform b [Homo
sapiens]
Length = 438
Score = 895 bits (2314), Expect = 0.0
Identities = 438/438 (100%), Positives = 438/438 (100%)
Query: 1 MAVSEIKPKLKLNPLTKVPISHNKRDRDLPGSLQCQLQHKEKKLSASQMAAFQDAYNFFY 60
MAVSEIKPKLKLNPLTKVPISHNKRDRDLPGSLQCQLQHKEKKLSASQMAAFQDAYNFFY
Sbjct: 1 MAVSEIKPKLKLNPLTKVPISHNKRDRDLPGSLQCQLQHKEKKLSASQMAAFQDAYNFFY 60
Query: 61 KDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLTDKNLFLK 120
KDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLTDKNLFLK
Sbjct: 61 KDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLTDKNLFLK 120
Query: 121 AVVPEKETCLDLAGNPGILLFEILSRLLETSALPRKSIIEIVSYFQRKFQHTGPGMLWSP 180
AVVPEKETCLDLAGNPGILLFEILSRLLETSALPRKSIIEIVSYFQRKFQHTGPGMLWSP
Sbjct: 121 AVVPEKETCLDLAGNPGILLFEILSRLLETSALPRKSIIEIVSYFQRKFQHTGPGMLWSP 180
Query: 181 YTMGYGKRTLKPDICTPPSSSMAAFANAARIAIMKEKDLFKFLEELKRCNSGSDSPYSKI 240
YTMGYGKRTLKPDICTPPSSSMAAFANAARIAIMKEKDLFKFLEELKRCNSGSDSPYSKI
Sbjct: 181 YTMGYGKRTLKPDICTPPSSSMAAFANAARIAIMKEKDLFKFLEELKRCNSGSDSPYSKI 240
Query: 241 PIFPLFPNVDGVVMGKPFKDMQKLEMLRIKEPLHFFEDYFFHKRDWKTQAANIKSMDPAS 300
PIFPLFPNVDGVVMGKPFKDMQKLEMLRIKEPLHFFEDYFFHKRDWKTQAANIKSMDPAS
Sbjct: 241 PIFPLFPNVDGVVMGKPFKDMQKLEMLRIKEPLHFFEDYFFHKRDWKTQAANIKSMDPAS 300
Query: 301 GYSNNIFTIDQMLKKKQTCTVADATAIKQHVKRATDTYNLGIALEHRKEMLNLWQKIRGD 360
GYSNNIFTIDQMLKKKQTCTVADATAIKQHVKRATDTYNLGIALEHRKEMLNLWQKIRGD
Sbjct: 301 GYSNNIFTIDQMLKKKQTCTVADATAIKQHVKRATDTYNLGIALEHRKEMLNLWQKIRGD 360
Query: 361 LIGMDSRNESFYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHNSRSSSSSDTSEC 420
LIGMDSRNESFYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHNSRSSSSSDTSEC
Sbjct: 361 LIGMDSRNESFYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHNSRSSSSSDTSEC 420
Query: 421 YTDSGRKRKRKGLKGFQQ 438
YTDSGRKRKRKGLKGFQQ
Sbjct: 421 YTDSGRKRKRKGLKGFQQ 438
>gi|169171895 PREDICTED: similar to EF-hand calcium binding domain 3
[Homo sapiens]
Length = 146
Score = 284 bits (726), Expect = 1e-76
Identities = 137/146 (93%), Positives = 141/146 (96%)
Query: 293 IKSMDPASGYSNNIFTIDQMLKKKQTCTVADATAIKQHVKRATDTYNLGIALEHRKEMLN 352
+KSMDPASGYSNNI TIDQMLKKKQTC VADAT IKQHVKRATDTYNLGIALEHRKEMLN
Sbjct: 1 MKSMDPASGYSNNILTIDQMLKKKQTCIVADATTIKQHVKRATDTYNLGIALEHRKEMLN 60
Query: 353 LWQKIRGDLIGMDSRNESFYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHNSRSS 412
LWQKIRGDLIG+DSRNE+FYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHN RSS
Sbjct: 61 LWQKIRGDLIGIDSRNEAFYDTFSTYTWSWNVCQELLSPKDLRLYDAYVNRNSSHNCRSS 120
Query: 413 SSSDTSECYTDSGRKRKRKGLKGFQQ 438
SSSDTSEC TDSGRKRK+KGLKGFQQ
Sbjct: 121 SSSDTSECDTDSGRKRKQKGLKGFQQ 146
>gi|38348382 spermatogenesis associated 21 [Homo sapiens]
Length = 469
Score = 81.6 bits (200), Expect = 1e-15
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 32 SLQCQLQHKEK---KLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDV 88
SLQ Q++EK +L+ Q AF+ + F + G +D L + +G ++T V
Sbjct: 203 SLQKLYQNREKSEEQLTLKQEEAFRSYFEIF--NGPGEVDAQSLKNILLLMGFSVTLAQV 260
Query: 89 YNELKCADIDRDGKVNFSDFIKVLTDKNLFLKAVVPEKETCLDLA-GNPGILLFEILSRL 147
+ L AD++ DG+V+F DF+ V+TD F +V E+ D+A NP LLFEILS L
Sbjct: 261 EDALMSADVNGDGRVDFKDFLAVMTDTRRFFCSV--EQNALSDMAPHNPHTLLFEILSLL 318
Query: 148 LETSALPRKSIIEIVSYFQRKFQHTGPGMLWSPYTMGYGKRTLKPDICTPPSSSMAAFAN 207
+E ALP + EI +Y+Q+K + G+ L+ P +
Sbjct: 319 VEMLALPEAVLEEITNYYQKKLKE--GTCKAQEMEAAVGRLRLQKLPYNPQQEESSE--- 373
Query: 208 AARIAIMKEKDLFKFLEELKRCNSGSD--SPYSKIPIFPLFPNVD 250
+ E+ + L LK+ N + SPY+++P L P +D
Sbjct: 374 ------VPERKVLSILSRLKQQNYAPNLQSPYAQVPCILLCPQLD 412
>gi|46397403 centrin 3 [Homo sapiens]
Length = 167
Score = 56.2 bits (134), Expect = 6e-08
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 40 KEKKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDR 99
K ++LS Q +DA+ F DK ID+H L + LG ++ K DV LK D +
Sbjct: 18 KRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREA 77
Query: 100 DGKVNFSDFIKVLTD 114
GK+ F DF +V+TD
Sbjct: 78 TGKITFEDFNEVVTD 92
Score = 35.0 bits (79), Expect = 0.13
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 55 AYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLT 113
A+ F D +G I L +LG N++ ++ ++ D D DG++N +FI ++T
Sbjct: 106 AFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMT 164
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 47.8 bits (112), Expect = 2e-05
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 20 ISHNKRDRDLPGSLQCQLQHKEKKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKL 79
++ N + ++ S Q + + +L+ Q ++A++ F D TG ID L + L
Sbjct: 1 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL 60
Query: 80 GMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLTDK 115
G K ++ + D + GK+NF DF+ V+T K
Sbjct: 61 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQK 96
Score = 43.1 bits (100), Expect = 5e-04
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 55 AYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLTD 114
A+ F D+TG I F L +LG NLT ++ + AD D DG+V+ +F++++
Sbjct: 109 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 168
Query: 115 KNLF 118
+L+
Sbjct: 169 TSLY 172
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 46.2 bits (108), Expect = 6e-05
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 53 QDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVL 112
++A+ F KD G I L + LG LT +V ++ ADID DG+VN+ +F++++
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Query: 113 TDK 115
T K
Sbjct: 147 TAK 149
Score = 43.1 bits (100), Expect = 5e-04
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 43 KLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGK 102
+L+ Q+A F++A++ F KD G I L + LG N T+ ++ + + D D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 103 VNFSDFIKVLTDK 115
++F +F+ ++ K
Sbjct: 64 IDFPEFLTMMARK 76
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 46.2 bits (108), Expect = 6e-05
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 53 QDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVL 112
++A+ F KD G I L + LG LT +V ++ ADID DG+VN+ +F++++
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Query: 113 TDK 115
T K
Sbjct: 147 TAK 149
Score = 43.1 bits (100), Expect = 5e-04
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 43 KLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGK 102
+L+ Q+A F++A++ F KD G I L + LG N T+ ++ + + D D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 103 VNFSDFIKVLTDK 115
++F +F+ ++ K
Sbjct: 64 IDFPEFLTMMARK 76
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 46.2 bits (108), Expect = 6e-05
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 53 QDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVL 112
++A+ F KD G I L + LG LT +V ++ ADID DG+VN+ +F++++
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Query: 113 TDK 115
T K
Sbjct: 147 TAK 149
Score = 43.1 bits (100), Expect = 5e-04
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 43 KLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGK 102
+L+ Q+A F++A++ F KD G I L + LG N T+ ++ + + D D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 103 VNFSDFIKVLTDK 115
++F +F+ ++ K
Sbjct: 64 IDFPEFLTMMARK 76
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 45.8 bits (107), Expect = 8e-05
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 53 QDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVL 112
++A+ F KD G + L + +LG L+ +V ++ AD D DG+VN+ +F++VL
Sbjct: 87 REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 146
Query: 113 TDK 115
K
Sbjct: 147 VSK 149
Score = 44.3 bits (103), Expect = 2e-04
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 43 KLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGK 102
+L+ Q+ F++A++ F KD GCI L + LG N T+ ++ + + D D +G
Sbjct: 4 QLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGT 63
Query: 103 VNFSDFIKVLTDK 115
V+F +F+ ++ K
Sbjct: 64 VDFPEFLGMMARK 76
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 44.7 bits (104), Expect = 2e-04
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 55 AYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLTD 114
A+ F D+TG I F L +LG NLT ++ + AD D DG+VN +F++++
Sbjct: 109 AFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKK 168
Query: 115 KNLF 118
+L+
Sbjct: 169 TSLY 172
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 43 KLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGK 102
+L+ Q ++A++ F D +G ID L + LG K ++ + D + GK
Sbjct: 24 ELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGK 83
Query: 103 VNFSDFIKVLTDK 115
++F+DF+ V+T K
Sbjct: 84 ISFNDFLAVMTQK 96
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 41.2 bits (95), Expect = 0.002
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 26 DRDLPGSLQCQLQHKEKKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTK 85
D D G + Q K + + + Q A+ F +D G I L +A LG L +
Sbjct: 57 DSDGDGEISFQEFLTAAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQ 116
Query: 86 HDVYNELKCADIDRDGKVNFSDFIKVLTDK 115
++ ++ AD+D+DG+VN+ +F ++L +
Sbjct: 117 EELDAMIREADVDQDGRVNYEEFARMLAQE 146
Score = 32.0 bits (71), Expect = 1.1
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 43 KLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGK 102
+L+ + A ++ A++ D G I+ L + G NL++ + + D D DG+
Sbjct: 4 ELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGE 63
Query: 103 VNFSDFI 109
++F +F+
Sbjct: 64 ISFQEFL 70
>gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]
Length = 887
Score = 38.5 bits (88), Expect = 0.012
Identities = 27/112 (24%), Positives = 47/112 (41%)
Query: 37 LQHKEKKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCAD 96
L K +S QM F+ ++N F + KTG +D + +G N+ + + + D
Sbjct: 736 LTRDAKGISQEQMNEFRASFNHFDRKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVD 795
Query: 97 IDRDGKVNFSDFIKVLTDKNLFLKAVVPEKETCLDLAGNPGILLFEILSRLL 148
+R G V F FI ++ + + LAG+ + + L R L
Sbjct: 796 PNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITMDELRREL 847
>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
Length = 167
Score = 35.8 bits (81), Expect = 0.079
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 37 LQHKEKKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCAD 96
L K++ L ++ ++A+ F KDK G I+ L + +G T+ ++ + +
Sbjct: 12 LSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQIN 71
Query: 97 IDRDGKVNFSDFIKVLTDKNL 117
++ G V+F DF++++ K L
Sbjct: 72 MNLGGHVDFDDFVELMGPKLL 92
Score = 29.3 bits (64), Expect = 7.4
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 53 QDAYNFFYKDKTGCIDFHGLMCTVAKL-GMNLTKHDVYNELKCADIDRDGKVNFSDFIKV 111
+DA+ F + G I L + KL G + D+ ++ D++ DG+V+F +F+++
Sbjct: 105 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 164
Query: 112 LT 113
++
Sbjct: 165 MS 166
>gi|4501893 actinin, alpha 2 [Homo sapiens]
Length = 894
Score = 35.4 bits (80), Expect = 0.10
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 37 LQHKEKKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCAD 96
L K ++ QM F+ ++N F + K G +D + +G +L + + + D
Sbjct: 743 LTRDAKGITQEQMNEFRASFNHFDRRKNGLMDHEDFRACLISMGYDLGEAEFARIMTLVD 802
Query: 97 IDRDGKVNFSDFIKVLT 113
+ G V F FI +T
Sbjct: 803 PNGQGTVTFQSFIDFMT 819
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 35.4 bits (80), Expect = 0.10
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 38 QHKEKKLSASQMAAFQDAYNFFYKDKTG---CIDFHGLMCTVAKLGMNLTKHDVYNELKC 94
+ +E+ L ++ ++A+ F KD+ G C D LM T+ + + ++ +++
Sbjct: 19 KQRERPLGQDEIEELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQIR- 77
Query: 95 ADIDRDGKVNFSDFIKVLTDKNLFLKA---VVPEKETC---LDLAGNPGILLFEI---LS 145
++ G+V+F DF++++T K L A V E D G+ I L E+ +
Sbjct: 78 --MNLGGRVDFDDFVELMTPKLLAETAGMIGVQEMRDAFKEFDTNGDGEITLVELQQAMQ 135
Query: 146 RLLETSALPRKSIIEIV 162
RLL PR+ I E+V
Sbjct: 136 RLLGERLTPRE-ISEVV 151
Score = 32.3 bits (72), Expect = 0.87
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 53 QDAYNFFYKDKTGCIDFHGLMCTVAKL-GMNLTKHDVYNELKCADIDRDGKVNFSDFIKV 111
+DA+ F + G I L + +L G LT ++ ++ AD++ DG V+F +F+K+
Sbjct: 111 RDAFKEFDTNGDGEITLVELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEEFVKM 170
Query: 112 LT 113
++
Sbjct: 171 MS 172
>gi|217035144 EF-hand calcium binding domain 7 [Homo sapiens]
Length = 629
Score = 33.9 bits (76), Expect = 0.30
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 35 CQLQHKEKKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKC 94
C + KEK S +++ ++ + GCI L + K G +T+ +V +
Sbjct: 93 CIILRKEKPTSKAELLK---SFKQLDVNDDGCILHTDLYKFLTKRGEKMTREEVNAIINL 149
Query: 95 ADIDRDGKVNFSDFIKV-LTDKNLFLKAVVPEKE 127
AD++ DGK ++ F K+ +T LK + + E
Sbjct: 150 ADVNADGKFDYIKFCKLYMTTNEQCLKTTLEKLE 183
>gi|110227596 calmodulin-like 4 isoform 2 [Homo sapiens]
Length = 149
Score = 33.9 bits (76), Expect = 0.30
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 61 KDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLT 113
K+K G + L + LG LT +V + + ADI+ +GKV + +FI +T
Sbjct: 91 KEKKGYVMASDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKYDEFIHKIT 143
>gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]
Length = 196
Score = 33.9 bits (76), Expect = 0.30
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 61 KDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSDFIKVLT 113
K+K G + L + LG LT +V + + ADI+ +GKV + +FI +T
Sbjct: 138 KEKKGYVMASDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKYDEFIHKIT 190
>gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo
sapiens]
Length = 477
Score = 33.5 bits (75), Expect = 0.39
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 46 ASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNF 105
A Q ++ + ++ G +D L + LG+ L + D+++DGK++F
Sbjct: 18 AEQPTRYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDF 77
Query: 106 SDFIKVLTDKNLFLK 120
+F+K L D +K
Sbjct: 78 EEFMKYLKDHEKKMK 92
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 33.5 bits (75), Expect = 0.39
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 36 QLQHKEKKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCA 95
Q++ K S ++A + + F ++ G ID L G ++T ++ + +K
Sbjct: 83 QMKEDAKGKSEEELA---ECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDG 139
Query: 96 DIDRDGKVNFSDFIKVL 112
D + DG+++F +F+K++
Sbjct: 140 DKNNDGRIDFDEFLKMM 156
>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 33.1 bits (74), Expect = 0.51
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 47 SQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFS 106
SQ+ F++A+N +++ G ID L +A LG N T D Y L + G +NF+
Sbjct: 29 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT--DAY--LDAMMNEAPGPINFT 84
Query: 107 DFIKVLTDK 115
F+ + +K
Sbjct: 85 MFLTMFGEK 93
>gi|20149675 EF-hand domain family, member D2 [Homo sapiens]
Length = 240
Score = 33.1 bits (74), Expect = 0.51
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 16/129 (12%)
Query: 42 KKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDG 101
K+ S Q+ + + + + G ID L + KLG T + N +K D D D
Sbjct: 87 KEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDS 146
Query: 102 KVNFSDFIKVLTDKNLFLKAVVPEKETCLDLAGNPGILLFEILSRLLETSALPRKSIIEI 161
K++F +F+ + F KA E + L +L+RL E + + +
Sbjct: 147 KLSFREFLLI------FRKAAAGELQEDSGLC---------VLARLSEID-VSSEGVKGA 190
Query: 162 VSYFQRKFQ 170
S+F+ K Q
Sbjct: 191 KSFFEAKVQ 199
>gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo
sapiens]
Length = 154
Score = 33.1 bits (74), Expect = 0.51
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 47 SQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFS 106
SQ+ F++A+N +++ G ID L +A LG N T D Y L + G +NF+
Sbjct: 11 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT--DAY--LDAMMNEAPGPINFT 66
Query: 107 DFIKVLTDK 115
F+ + +K
Sbjct: 67 MFLTMFGEK 75
>gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 33.1 bits (74), Expect = 0.51
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 47 SQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFS 106
SQ+ F++A+N +++ G ID L +A LG N T D Y L + G +NF+
Sbjct: 29 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT--DAY--LDAMMNEAPGPINFT 84
Query: 107 DFIKVLTDK 115
F+ + +K
Sbjct: 85 MFLTMFGEK 93
>gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 33.1 bits (74), Expect = 0.51
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 47 SQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFS 106
SQ+ F++A+N +++ G ID L +A LG N T D Y L + G +NF+
Sbjct: 29 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT--DAY--LDAMMNEAPGPINFT 84
Query: 107 DFIKVLTDK 115
F+ + +K
Sbjct: 85 MFLTMFGEK 93
>gi|32698884 calcium binding protein 7 [Homo sapiens]
Length = 215
Score = 32.7 bits (73), Expect = 0.67
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 48 QMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFSD 107
++ ++A+ F +D G I L + LG + ++ ++ D+D DG+V+F +
Sbjct: 34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEE 93
Query: 108 FIKVLTDKNLFLKAVVPEK 126
F+ +L K + +PEK
Sbjct: 94 FVTLLGPK--LSTSGIPEK 110
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 32.7 bits (73), Expect = 0.67
Identities = 18/78 (23%), Positives = 41/78 (52%)
Query: 40 KEKKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDR 99
+++ L ++ ++A+ F KDK G I+ L + +G T+ ++ + +++
Sbjct: 218 QDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 277
Query: 100 DGKVNFSDFIKVLTDKNL 117
G V+F DF++++ K L
Sbjct: 278 GGHVDFDDFVELMGPKLL 295
Score = 29.3 bits (64), Expect = 7.4
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 53 QDAYNFFYKDKTGCIDFHGLMCTVAKL-GMNLTKHDVYNELKCADIDRDGKVNFSDFIKV 111
+DA+ F + G I L + KL G + D+ ++ D++ DG+V+F +F+++
Sbjct: 308 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 367
Query: 112 LT 113
++
Sbjct: 368 MS 369
>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
sapiens]
Length = 172
Score = 32.7 bits (73), Expect = 0.67
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 47 SQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDGKVNFS 106
SQ+ F++A+N +++ G ID L +A LG N T D Y E + + G +NF+
Sbjct: 29 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT--DEYLEGMMS--EAPGPINFT 84
Query: 107 DFIKVLTDK 115
F+ + +K
Sbjct: 85 MFLTMFGEK 93
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 32.7 bits (73), Expect = 0.67
Identities = 18/71 (25%), Positives = 36/71 (50%)
Query: 42 KKLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDVYNELKCADIDRDG 101
++LSA Q+ ++ + F ++ G + L ++ LG+N TK ++ + K D D G
Sbjct: 28 ERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRDNKG 87
Query: 102 KVNFSDFIKVL 112
N F+ ++
Sbjct: 88 FFNCDGFLALM 98
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,661,261
Number of Sequences: 37866
Number of extensions: 711897
Number of successful extensions: 2086
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2016
Number of HSP's gapped (non-prelim): 83
length of query: 438
length of database: 18,247,518
effective HSP length: 105
effective length of query: 333
effective length of database: 14,271,588
effective search space: 4752438804
effective search space used: 4752438804
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.