Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 27477136
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27477136 zinc finger antiviral protein isoform 1 [Homo
sapiens]
(902 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens] 1857 0.0
gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens] 1440 0.0
gi|12232413 poly ADP-ribose polymerase 12 [Homo sapiens] 292 8e-79
gi|18087829 zinc finger CCCH-type, antiviral 1-like [Homo sapiens] 179 1e-44
gi|194328777 poly (ADP-ribose) polymerase family, member 11 [Hom... 148 2e-35
gi|38524594 TCDD-inducible poly(ADP-ribose) polymerase [Homo sap... 136 8e-32
gi|22749259 poly (ADP-ribose) polymerase family, member 15 isofo... 102 2e-21
gi|165377137 poly (ADP-ribose) polymerase family, member 15 isof... 102 2e-21
gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Hom... 85 3e-16
gi|226371716 poly (ADP-ribose) polymerase family, member 9 isofo... 69 2e-11
gi|226371714 poly (ADP-ribose) polymerase family, member 9 isofo... 69 2e-11
gi|226371712 poly (ADP-ribose) polymerase family, member 9 isofo... 69 2e-11
gi|226371710 poly (ADP-ribose) polymerase family, member 9 isofo... 69 2e-11
gi|226371706 poly (ADP-ribose) polymerase family, member 9 isofo... 69 2e-11
gi|157738665 poly (ADP-ribose) polymerase family, member 10 [Hom... 64 8e-10
gi|13376842 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 49 3e-05
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 46 1e-04
gi|158634482 poly (ADP-ribose) polymerase family, member 3 isofo... 41 0.004
gi|158634478 poly (ADP-ribose) polymerase family, member 3 isofo... 41 0.004
gi|60097902 filaggrin [Homo sapiens] 37 0.083
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 36 0.14
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 36 0.18
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 36 0.18
gi|83367077 mucin 16 [Homo sapiens] 35 0.31
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 35 0.41
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 35 0.41
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 35 0.41
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 35 0.41
gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo... 33 0.92
gi|17149830 G protein-coupled receptor kinase interacting ArfGAP... 33 0.92
>gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens]
Length = 902
Score = 1857 bits (4811), Expect = 0.0
Identities = 902/902 (100%), Positives = 902/902 (100%)
Query: 1 MADPEVCCFITKILCAHGGRMALDALLQEIALSEPQLCEVLQVAGPDRFVVLETGGEAGI 60
MADPEVCCFITKILCAHGGRMALDALLQEIALSEPQLCEVLQVAGPDRFVVLETGGEAGI
Sbjct: 1 MADPEVCCFITKILCAHGGRMALDALLQEIALSEPQLCEVLQVAGPDRFVVLETGGEAGI 60
Query: 61 TRSVVATTRARVCRRKYCQRPCDNLHLCKLNLLGRCNYSQSERNLCKYSHEVLSEENFKV 120
TRSVVATTRARVCRRKYCQRPCDNLHLCKLNLLGRCNYSQSERNLCKYSHEVLSEENFKV
Sbjct: 61 TRSVVATTRARVCRRKYCQRPCDNLHLCKLNLLGRCNYSQSERNLCKYSHEVLSEENFKV 120
Query: 121 LKNHELSGLNKEELAVLLLQSDPFFMPEICKSYKGEGRQQICNQQPPCSRLHICDHFTRG 180
LKNHELSGLNKEELAVLLLQSDPFFMPEICKSYKGEGRQQICNQQPPCSRLHICDHFTRG
Sbjct: 121 LKNHELSGLNKEELAVLLLQSDPFFMPEICKSYKGEGRQQICNQQPPCSRLHICDHFTRG 180
Query: 181 NCRFPNCLRSHNLMDRKVLAIMREHGLNPDVVQNIQDICNSKHMQKNPPGPRAPSSHRRN 240
NCRFPNCLRSHNLMDRKVLAIMREHGLNPDVVQNIQDICNSKHMQKNPPGPRAPSSHRRN
Sbjct: 181 NCRFPNCLRSHNLMDRKVLAIMREHGLNPDVVQNIQDICNSKHMQKNPPGPRAPSSHRRN 240
Query: 241 MAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPVDDLTRKFTYL 300
MAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPVDDLTRKFTYL
Sbjct: 241 MAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPVDDLTRKFTYL 300
Query: 301 GSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWK 360
GSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWK
Sbjct: 301 GSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWK 360
Query: 361 SLTSWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGTQ 420
SLTSWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGTQ
Sbjct: 361 SLTSWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGTQ 420
Query: 421 DIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHREISSPRIQDAGPASRDVQATGRIAD 480
DIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHREISSPRIQDAGPASRDVQATGRIAD
Sbjct: 421 DIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHREISSPRIQDAGPASRDVQATGRIAD 480
Query: 481 DADPRVALVNDSLSDVTSTTSSRVDDHDSEEICLDHLCKGCPLNGSCSKVHFHLPYRWQM 540
DADPRVALVNDSLSDVTSTTSSRVDDHDSEEICLDHLCKGCPLNGSCSKVHFHLPYRWQM
Sbjct: 481 DADPRVALVNDSLSDVTSTTSSRVDDHDSEEICLDHLCKGCPLNGSCSKVHFHLPYRWQM 540
Query: 541 LIGKTWTDFEHMETIEKGYCNPGIHLCSVGSYTINFRVMSCDSFPIRRLSTPSSVTKPAN 600
LIGKTWTDFEHMETIEKGYCNPGIHLCSVGSYTINFRVMSCDSFPIRRLSTPSSVTKPAN
Sbjct: 541 LIGKTWTDFEHMETIEKGYCNPGIHLCSVGSYTINFRVMSCDSFPIRRLSTPSSVTKPAN 600
Query: 601 SVFTTKWIWYWKNESGTWIQYGEEKDKRKNSNVDSSYLESLYQSCPRGVVPFQAGSRNYE 660
SVFTTKWIWYWKNESGTWIQYGEEKDKRKNSNVDSSYLESLYQSCPRGVVPFQAGSRNYE
Sbjct: 601 SVFTTKWIWYWKNESGTWIQYGEEKDKRKNSNVDSSYLESLYQSCPRGVVPFQAGSRNYE 660
Query: 661 LSFQGMIQTNIASKTQKDVIRRPTFVPQWYVQQMKRGPDHQPAKTSSVSLTATFRPQEDF 720
LSFQGMIQTNIASKTQKDVIRRPTFVPQWYVQQMKRGPDHQPAKTSSVSLTATFRPQEDF
Sbjct: 661 LSFQGMIQTNIASKTQKDVIRRPTFVPQWYVQQMKRGPDHQPAKTSSVSLTATFRPQEDF 720
Query: 721 CFLSSKKYKLSEIHHLHPEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQMKE 780
CFLSSKKYKLSEIHHLHPEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQMKE
Sbjct: 721 CFLSSKKYKLSEIHHLHPEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQMKE 780
Query: 781 EGKLLFYATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNCPYDAKNVVM 840
EGKLLFYATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNCPYDAKNVVM
Sbjct: 781 EGKLLFYATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNCPYDAKNVVM 840
Query: 841 FVAQVLVGKFTEGNITYTSPPPQFDSCVDTRSNPSVFVIFQKDQVYPQYVIEYTEDKACV 900
FVAQVLVGKFTEGNITYTSPPPQFDSCVDTRSNPSVFVIFQKDQVYPQYVIEYTEDKACV
Sbjct: 841 FVAQVLVGKFTEGNITYTSPPPQFDSCVDTRSNPSVFVIFQKDQVYPQYVIEYTEDKACV 900
Query: 901 IS 902
IS
Sbjct: 901 IS 902
>gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens]
Length = 699
Score = 1440 bits (3728), Expect = 0.0
Identities = 698/699 (99%), Positives = 699/699 (100%)
Query: 1 MADPEVCCFITKILCAHGGRMALDALLQEIALSEPQLCEVLQVAGPDRFVVLETGGEAGI 60
MADPEVCCFITKILCAHGGRMALDALLQEIALSEPQLCEVLQVAGPDRFVVLETGGEAGI
Sbjct: 1 MADPEVCCFITKILCAHGGRMALDALLQEIALSEPQLCEVLQVAGPDRFVVLETGGEAGI 60
Query: 61 TRSVVATTRARVCRRKYCQRPCDNLHLCKLNLLGRCNYSQSERNLCKYSHEVLSEENFKV 120
TRSVVATTRARVCRRKYCQRPCDNLHLCKLNLLGRCNYSQSERNLCKYSHEVLSEENFKV
Sbjct: 61 TRSVVATTRARVCRRKYCQRPCDNLHLCKLNLLGRCNYSQSERNLCKYSHEVLSEENFKV 120
Query: 121 LKNHELSGLNKEELAVLLLQSDPFFMPEICKSYKGEGRQQICNQQPPCSRLHICDHFTRG 180
LKNHELSGLNKEELAVLLLQSDPFFMPEICKSYKGEGRQQICNQQPPCSRLHICDHFTRG
Sbjct: 121 LKNHELSGLNKEELAVLLLQSDPFFMPEICKSYKGEGRQQICNQQPPCSRLHICDHFTRG 180
Query: 181 NCRFPNCLRSHNLMDRKVLAIMREHGLNPDVVQNIQDICNSKHMQKNPPGPRAPSSHRRN 240
NCRFPNCLRSHNLMDRKVLAIMREHGLNPDVVQNIQDICNSKHMQKNPPGPRAPSSHRRN
Sbjct: 181 NCRFPNCLRSHNLMDRKVLAIMREHGLNPDVVQNIQDICNSKHMQKNPPGPRAPSSHRRN 240
Query: 241 MAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPVDDLTRKFTYL 300
MAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPVDDLTRKFTYL
Sbjct: 241 MAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPVDDLTRKFTYL 300
Query: 301 GSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWK 360
GSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWK
Sbjct: 301 GSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWK 360
Query: 361 SLTSWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGTQ 420
SLTSWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGTQ
Sbjct: 361 SLTSWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGTQ 420
Query: 421 DIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHREISSPRIQDAGPASRDVQATGRIAD 480
DIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHREISSPRIQDAGPASRDVQATGRIAD
Sbjct: 421 DIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHREISSPRIQDAGPASRDVQATGRIAD 480
Query: 481 DADPRVALVNDSLSDVTSTTSSRVDDHDSEEICLDHLCKGCPLNGSCSKVHFHLPYRWQM 540
DADPRVALVNDSLSDVTSTTSSRVDDHDSEEICLDHLCKGCPLNGSCSKVHFHLPYRWQM
Sbjct: 481 DADPRVALVNDSLSDVTSTTSSRVDDHDSEEICLDHLCKGCPLNGSCSKVHFHLPYRWQM 540
Query: 541 LIGKTWTDFEHMETIEKGYCNPGIHLCSVGSYTINFRVMSCDSFPIRRLSTPSSVTKPAN 600
LIGKTWTDFEHMETIEKGYCNPGIHLCSVGSYTINFRVMSCDSFPIRRLSTPSSVTKPAN
Sbjct: 541 LIGKTWTDFEHMETIEKGYCNPGIHLCSVGSYTINFRVMSCDSFPIRRLSTPSSVTKPAN 600
Query: 601 SVFTTKWIWYWKNESGTWIQYGEEKDKRKNSNVDSSYLESLYQSCPRGVVPFQAGSRNYE 660
SVFTTKWIWYWKNESGTWIQYGEEKDKRKNSNVDSSYLESLYQSCPRGVVPFQAGSRNYE
Sbjct: 601 SVFTTKWIWYWKNESGTWIQYGEEKDKRKNSNVDSSYLESLYQSCPRGVVPFQAGSRNYE 660
Query: 661 LSFQGMIQTNIASKTQKDVIRRPTFVPQWYVQQMKRGPD 699
LSFQGMIQTNIASKTQKDVIRRPTFVPQWYVQQMKRGP+
Sbjct: 661 LSFQGMIQTNIASKTQKDVIRRPTFVPQWYVQQMKRGPE 699
>gi|12232413 poly ADP-ribose polymerase 12 [Homo sapiens]
Length = 701
Score = 292 bits (748), Expect = 8e-79
Identities = 170/438 (38%), Positives = 239/438 (54%), Gaps = 50/438 (11%)
Query: 491 DSLSDVTSTTSSRVDDHDSEEICLDHLCKGCPLNGSCSKVHFHLPYRWQMLIGKTWTDFE 550
DS V+ T S+ + ++ICL H+ K C C +VHFHLPYRWQ L W D +
Sbjct: 257 DSSGSVSPNTLSQ---EEGDQICLYHIRKSCSFQDKCHRVHFHLPYRWQFLDRGKWEDLD 313
Query: 551 HMETIEKGYCNPGIH--LCSVG-----SYTINFRVMSCDSFPIRRLSTPSSVTKPANSVF 603
+ME IE+ YCNP I LCS S+ +NF M+ + RRLST SSVTKP + +
Sbjct: 314 NMELIEEAYCNPKIERILCSESASTFHSHCLNFNAMTYGATQARRLSTASSVTKPPHFIL 373
Query: 604 TTKWIWYWKNESGTWIQYGEEKDKRKNSNVDSSYLESLYQS-CPRG------VVPFQAGS 656
TT WIWYW +E G+W +YG + + V SS +E Y + C G + FQAG
Sbjct: 374 TTDWIWYWSDEFGSWQEYGRQGTVHPVTTVSSSDVEKAYLAYCTPGSDGQAATLKFQAGK 433
Query: 657 RNYELSFQGMIQTNIASKTQKDVIRRPTFVPQWYVQQMKR------GPDHQPAKTSSVSL 710
NYEL F+ +Q N+ T K V RRP +V V M+ GP P S +L
Sbjct: 434 HNYELDFKAFVQKNLVYGTTKKVCRRPKYVSPQDVTTMQTCNTKFPGPKSIPDYWDSSAL 493
Query: 711 TATFRPQEDFCFLSSKKYKLSEIHHLHPEYVRVSEHFKASMKNFKIEKIKKIENSELLDK 770
P F +K LS EY +V F ++ + ++KI++++N L +
Sbjct: 494 -----PDPGF-----QKITLSSSSE---EYQKVWNLFNRTLPFYFVQKIERVQNLALWEV 540
Query: 771 FTWKKSQMKEEG-------KLLFYATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKD 823
+ W+K QM+++ + LF+ TS +V++IC NFD + H YGKG YFA+D
Sbjct: 541 YQWQKGQMQKQNGGKAVDERQLFHGTSAIFVDAICQQNFDWRVCGVHGTSYGKGSYFARD 600
Query: 824 AIYSHKNCPYDAKNVVMFVAQVLVGKFTEGNITYTSPPPQ-------FDSCVDTRSNPSV 876
A YSH D + MF+A+VLVG+F GN ++ PP + +DSCV++ S+PS+
Sbjct: 601 AAYSHHYSKSDTQTHTMFLARVLVGEFVRGNASFVRPPAKEGWSNAFYDSCVNSVSDPSI 660
Query: 877 FVIFQKDQVYPQYVIEYT 894
FVIF+K QVYP+YVI+YT
Sbjct: 661 FVIFEKHQVYPEYVIQYT 678
Score = 136 bits (343), Expect = 8e-32
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 14/238 (5%)
Query: 1 MADPEVCCFITKILCAHGGRMALDALLQEI--ALSEPQLCEVLQVAGPDRFVVLETGGEA 58
MA V +T++LCA GG + L L + + LS L +L+ G RFVV G A
Sbjct: 1 MAQAGVVGEVTQVLCAAGGALELPELRRRLRMGLSADALERLLRQRG--RFVVAVRAGGA 58
Query: 59 GIT--RSVVATTRARVCRRKYCQRP-----CDNLHLCKLNLLGRCNYSQSERNLCKYSHE 111
R V+A + R+CR +P C LHLC+ + G C + ++ +N C+ SH
Sbjct: 59 AAAPERVVLAASPLRLCRAHQGSKPGCVGLCAQLHLCRFMVYGACKFLRAGKN-CRNSHS 117
Query: 112 VLSEENFKVLKNHELSGLNKEELAVLLLQSDPFFMPEICKSY-KGEGRQQICNQQPPCSR 170
+ +E N VL+ H + L+ EL LL Q+DP+ +PEIC+ Y KG+G C Q C +
Sbjct: 118 LTTEHNLSVLRTHGVDHLSYNELCQLLFQNDPWLLPEICQHYNKGDGPHGSCAFQKQCIK 177
Query: 171 LHICDHFTRGNCRF-PNCLRSHNLMDRKVLAIMREHGLNPDVVQNIQDICNSKHMQKN 227
LHIC +F +G C+F +C RSH+ + + L + + G++ D+V + I + H KN
Sbjct: 178 LHICQYFLQGECKFGTSCKRSHDFSNSENLEKLEKLGMSSDLVSRLPTIYRNAHDIKN 235
>gi|18087829 zinc finger CCCH-type, antiviral 1-like [Homo sapiens]
Length = 300
Score = 179 bits (454), Expect = 1e-44
Identities = 98/247 (39%), Positives = 141/247 (57%), Gaps = 24/247 (9%)
Query: 1 MADPEVCCFITKILCAHGGRMALDALLQEIALSEPQLCEVLQVAGPDRFVVLE------- 53
MA+P VC F+TK+LCAHGGRM L L + LSE +L +VLQ AGP+RF++ E
Sbjct: 1 MAEPTVCSFLTKVLCAHGGRMFLKDLRGHVELSEARLRDVLQRAGPERFLLQEVETQEGL 60
Query: 54 -----------TGGEAGITRSVVATTRARVC---RRKYCQRPCDNLHLCKLNLLGRCNYS 99
GG VVA + R+C +R CQ CD LH C+ ++LG+C +
Sbjct: 61 GDAEAEAAAGAVGGGGTSAWRVVAVSSVRLCARYQRGECQ-ACDQLHFCRRHMLGKCP-N 118
Query: 100 QSERNLCKYSHEVLSEENFKVLKNHELSGLNKEELAVLLLQSDPFFMPEICKSY-KGEGR 158
+ + C SH++ + N +VLK+H L GLN+ +L +LLLQ+DP +PE+C Y KGE
Sbjct: 119 RDCWSTCTLSHDIHTPVNMQVLKSHGLFGLNENQLRILLLQNDPCLLPEVCLLYNKGEAL 178
Query: 159 QQICNQQPPCSRLHICDHFTRGNCRFPNCLRSHNLMDRKVLAIMREHGLNPDVVQNIQDI 218
CN + C++ H+C F +G C+ C RSH L+ L ++++ GLN V N Q I
Sbjct: 179 YGYCNLKDKCNKFHVCKSFVKGECKLQTCKRSHQLIHAASLKLLQDQGLNIPSVVNFQII 238
Query: 219 CNSKHMQ 225
KH++
Sbjct: 239 STYKHIK 245
>gi|194328777 poly (ADP-ribose) polymerase family, member 11 [Homo
sapiens]
Length = 338
Score = 148 bits (374), Expect = 2e-35
Identities = 93/324 (28%), Positives = 163/324 (50%), Gaps = 53/324 (16%)
Query: 605 TKWIWYWKNESGTWIQYGEEKDKRKNSNVDSSYLESLYQSCPRGVVPFQAGSRNYELSFQ 664
T+W W++ E G W + + D +V S +E +++ P G + F +Y++ F
Sbjct: 32 TQWGWFYLAECGKWHMF--QPDTNSQCSVSSEDIEKSFKTNPCGSISFTTSKFSYKIDFA 89
Query: 665 GMIQTNIASKTQKDVIRRPTFVPQW-YVQQMKRGPDHQPAKTSSVSLTATFRPQEDFCFL 723
M Q N+ + Q+ + R P + + Y+ + + P P +V+
Sbjct: 90 EMKQMNLTTGKQRLIKRAPFSISAFSYICENEAIP--MPPHWENVN-------------- 133
Query: 724 SSKKYKLSEIHHLHPEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQMKEEG- 782
+ Y+L +H+ EY V+ F +M +I++I++I+N +L + F KK+Q+K++
Sbjct: 134 TQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEFFCRKKAQLKKKRG 193
Query: 783 ------KLLFYATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNCPYDAK 836
++LF+ TS +VE+IC +NFD ++ H +GKG YFA+DA YS + C D K
Sbjct: 194 VPQINEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARDAAYSSRFCKDDIK 253
Query: 837 N--------------------VVMFVAQVLVGKFTEGNITYTSPPPQ-------FDSCVD 869
+ MF+A+VL+G + G+ Y PP + +DSCVD
Sbjct: 254 HGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSKDGSYVNLYDSCVD 313
Query: 870 TRSNPSVFVIFQKDQVYPQYVIEY 893
NP +FV+F +Q+YP+Y+I++
Sbjct: 314 DTWNPKIFVVFDANQIYPEYLIDF 337
>gi|38524594 TCDD-inducible poly(ADP-ribose) polymerase [Homo
sapiens]
Length = 657
Score = 136 bits (343), Expect = 8e-32
Identities = 125/434 (28%), Positives = 187/434 (43%), Gaps = 73/434 (16%)
Query: 511 EICLDHLCKGCPLNGSCSKVHFHLPYRWQMLIGKT--WTDF--EHMETIEKGYCNPGIHL 566
EIC+D L C C K H LPY WQ+ T W + E +E+ YCNP
Sbjct: 241 EICMDFLQGTCIYGRDCLKHHTVLPYHWQIKRTTTQKWQSVFNDSQEHLERFYCNPENDR 300
Query: 567 CSVGSYTINF-------RVMSCDSFP-IRRLSTPSSVTKPANSVFTTKWIWYWKNESGTW 618
+ F V F +RRLSTP S NS++ T W ++ ++ G W
Sbjct: 301 MRMKYGGQEFWADLNAMNVYETTEFDQLRRLSTPPSSN--VNSIYHTVWKFFCRDHFG-W 357
Query: 619 IQYGEEKDKRKNSNVDSSYLESLYQSCPRGV--VPFQAGSRNYELSFQGMIQTNIASKTQ 676
+Y E S + + ++ RG+ V F + +Y L S +
Sbjct: 358 REYPE------------SVIRLIEEANSRGLKEVRFMMWNNHYILH---------NSFFR 396
Query: 677 KDVIRRPTFVPQW----YVQQMKRGPDHQPAKTSSVS----------LTATFRPQEDFCF 722
+++ RRP F + Y+Q + P P + S +A F P+
Sbjct: 397 REIKRRPLFRSCFILLPYLQTLGGVPTQAPPPLEATSSSQIICPDGVTSANFYPETWVYM 456
Query: 723 LSSKKYKLSEIHHLHPEYVRVSEHFKASMKNFK--IEKIKKIENSELLDKFTWKKSQMKE 780
S+ + + Y + F ++ FK I +I +++N L +K+ KK M
Sbjct: 457 HPSQDFIQVPVSAEDKSYRIIYNLFHKTVPEFKYRILQILRVQNQFLWEKYKRKKEYMNR 516
Query: 781 E---------GKLLFYATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNC 831
+ + LF+ TS+ V+ IC +NFD + H +G+G YFAK A YSH
Sbjct: 517 KMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQGSYFAKKASYSHNFS 576
Query: 832 PYDAKNV-VMFVAQVLVGKFTEGNITYTSPPP---------QFDSCVDTRSNPSVFVIFQ 881
+K V MF+A+VL G++T G+ PPP +DSCVD P +FVIF
Sbjct: 577 KKSSKGVHFMFLAKVLTGRYTMGSHGMRRPPPVNPGSVTSDLYDSCVDNFFEPQIFVIFN 636
Query: 882 KDQVYPQYVIEYTE 895
DQ YP +VI+Y E
Sbjct: 637 DDQSYPYFVIQYEE 650
>gi|22749259 poly (ADP-ribose) polymerase family, member 15 isoform
2 [Homo sapiens]
Length = 444
Score = 102 bits (254), Expect = 2e-21
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 18/238 (7%)
Query: 674 KTQKDVIRRPTFVPQWYVQQMKRGPDHQPAKTSSVSLTATFRPQEDFCFLSSKKYKLSEI 733
KT K VI +P + +Y KR S+ S+T P E + ++ + + + ++
Sbjct: 207 KTVKVVIFQPELLNIFYDSMKKRDLSASLNFQSTFSMTTCNLP-EHWTDMNHQLFCMVQL 265
Query: 734 HHLHPEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQM------KEEGKLLFY 787
EY + + F + ++ IEKI++I+N+ L + KK QM K +LLF+
Sbjct: 266 EPGQSEYNTIKDKFTRTCSSYAIEKIERIQNAFLWQSYQVKKRQMDIKNDHKNNERLLFH 325
Query: 788 ATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNC---PYDAKNVVMFVAQ 844
T V + + F+ + YGKG YFA DA YS K+ P M+V +
Sbjct: 326 GTDADSVPYVNQHGFNRSCAGKNAVSYGKGTYFAVDASYSAKDTYSKPDSNGRKHMYVVR 385
Query: 845 VLVGKFTEGNITYTSPPPQ--------FDSCVDTRSNPSVFVIFQKDQVYPQYVIEYT 894
VL G FT+G +PPP+ FDS + +P +FV+F +Q YP+Y+I +T
Sbjct: 386 VLTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNTRSPKLFVVFFDNQAYPEYLITFT 443
>gi|165377137 poly (ADP-ribose) polymerase family, member 15 isoform
1 [Homo sapiens]
Length = 678
Score = 102 bits (254), Expect = 2e-21
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 18/238 (7%)
Query: 674 KTQKDVIRRPTFVPQWYVQQMKRGPDHQPAKTSSVSLTATFRPQEDFCFLSSKKYKLSEI 733
KT K VI +P + +Y KR S+ S+T P E + ++ + + + ++
Sbjct: 441 KTVKVVIFQPELLNIFYDSMKKRDLSASLNFQSTFSMTTCNLP-EHWTDMNHQLFCMVQL 499
Query: 734 HHLHPEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQM------KEEGKLLFY 787
EY + + F + ++ IEKI++I+N+ L + KK QM K +LLF+
Sbjct: 500 EPGQSEYNTIKDKFTRTCSSYAIEKIERIQNAFLWQSYQVKKRQMDIKNDHKNNERLLFH 559
Query: 788 ATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNC---PYDAKNVVMFVAQ 844
T V + + F+ + YGKG YFA DA YS K+ P M+V +
Sbjct: 560 GTDADSVPYVNQHGFNRSCAGKNAVSYGKGTYFAVDASYSAKDTYSKPDSNGRKHMYVVR 619
Query: 845 VLVGKFTEGNITYTSPPPQ--------FDSCVDTRSNPSVFVIFQKDQVYPQYVIEYT 894
VL G FT+G +PPP+ FDS + +P +FV+F +Q YP+Y+I +T
Sbjct: 620 VLTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNTRSPKLFVVFFDNQAYPEYLITFT 677
>gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Homo
sapiens]
Length = 1801
Score = 84.7 bits (208), Expect = 3e-16
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 25/194 (12%)
Query: 717 QEDFCFLSSKKYKLSEIHHLHPEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKS 776
Q++FC + E+ PEY V+ F + +F+IEKI++I+N +L + + KK
Sbjct: 1614 QQNFCVV--------ELLPSDPEYNTVASKFNQTCSHFRIEKIERIQNPDLWNSYQAKKK 1665
Query: 777 QMKEEG------KLLFYATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKN 830
M + K LF+ T V + N F+ + YGKG YFA +A YS +
Sbjct: 1666 TMDAKNGQTMNEKQLFHGTDAGSVPHVNRNGFNRSYAGKNAVAYGKGTYFAVNANYSAND 1725
Query: 831 C---PYDAKNVVMFVAQVLVGKFTEGNITYTSPP---PQ-----FDSCVDTRSNPSVFVI 879
P ++ +VL G +T GN + PP PQ +D+ D +PS+FV
Sbjct: 1726 TYSRPDANGRKHVYYVRVLTGIYTHGNHSLIVPPSKNPQNPTDLYDTVTDNVHHPSLFVA 1785
Query: 880 FQKDQVYPQYVIEY 893
F Q YP+Y+I +
Sbjct: 1786 FYDYQAYPEYLITF 1799
>gi|226371716 poly (ADP-ribose) polymerase family, member 9 isoform
b [Homo sapiens]
Length = 819
Score = 69.3 bits (168), Expect = 2e-11
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 755 KIEKIKKIENSELLDKFTWKKSQMKEE------GKLLFYATSRAYVESICSNNFDSFLHE 808
++ K++KI+N L+ F KK M+E+ LF + +C F
Sbjct: 632 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSHRLFQQVPYQFCNVVCRVGFQRMYST 691
Query: 809 THENKYGKGIYFAKDAIYSHKNCPYDAKNV-------VMFVAQVLVGKFTEGNITYTSPP 861
+ KYG GIYF K+ KN AK + +F A+VL G F +G+ PP
Sbjct: 692 PCDPKYGAGIYFTKNL----KNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPP 747
Query: 862 PQ-------FDSCVDTRSNPSVFVIFQKDQVYPQYVIEYTED 896
P DS VD S+P FVIF Q PQY+ T++
Sbjct: 748 PLSPGAIDGHDSVVDNVSSPETFVIFSGMQAIPQYLWTCTQE 789
>gi|226371714 poly (ADP-ribose) polymerase family, member 9 isoform
b [Homo sapiens]
Length = 819
Score = 69.3 bits (168), Expect = 2e-11
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 755 KIEKIKKIENSELLDKFTWKKSQMKEE------GKLLFYATSRAYVESICSNNFDSFLHE 808
++ K++KI+N L+ F KK M+E+ LF + +C F
Sbjct: 632 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSHRLFQQVPYQFCNVVCRVGFQRMYST 691
Query: 809 THENKYGKGIYFAKDAIYSHKNCPYDAKNV-------VMFVAQVLVGKFTEGNITYTSPP 861
+ KYG GIYF K+ KN AK + +F A+VL G F +G+ PP
Sbjct: 692 PCDPKYGAGIYFTKNL----KNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPP 747
Query: 862 PQ-------FDSCVDTRSNPSVFVIFQKDQVYPQYVIEYTED 896
P DS VD S+P FVIF Q PQY+ T++
Sbjct: 748 PLSPGAIDGHDSVVDNVSSPETFVIFSGMQAIPQYLWTCTQE 789
>gi|226371712 poly (ADP-ribose) polymerase family, member 9 isoform
b [Homo sapiens]
Length = 819
Score = 69.3 bits (168), Expect = 2e-11
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 755 KIEKIKKIENSELLDKFTWKKSQMKEE------GKLLFYATSRAYVESICSNNFDSFLHE 808
++ K++KI+N L+ F KK M+E+ LF + +C F
Sbjct: 632 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSHRLFQQVPYQFCNVVCRVGFQRMYST 691
Query: 809 THENKYGKGIYFAKDAIYSHKNCPYDAKNV-------VMFVAQVLVGKFTEGNITYTSPP 861
+ KYG GIYF K+ KN AK + +F A+VL G F +G+ PP
Sbjct: 692 PCDPKYGAGIYFTKNL----KNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPP 747
Query: 862 PQ-------FDSCVDTRSNPSVFVIFQKDQVYPQYVIEYTED 896
P DS VD S+P FVIF Q PQY+ T++
Sbjct: 748 PLSPGAIDGHDSVVDNVSSPETFVIFSGMQAIPQYLWTCTQE 789
>gi|226371710 poly (ADP-ribose) polymerase family, member 9 isoform
a [Homo sapiens]
Length = 854
Score = 69.3 bits (168), Expect = 2e-11
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 755 KIEKIKKIENSELLDKFTWKKSQMKEE------GKLLFYATSRAYVESICSNNFDSFLHE 808
++ K++KI+N L+ F KK M+E+ LF + +C F
Sbjct: 667 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSHRLFQQVPYQFCNVVCRVGFQRMYST 726
Query: 809 THENKYGKGIYFAKDAIYSHKNCPYDAKNV-------VMFVAQVLVGKFTEGNITYTSPP 861
+ KYG GIYF K+ KN AK + +F A+VL G F +G+ PP
Sbjct: 727 PCDPKYGAGIYFTKNL----KNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPP 782
Query: 862 PQ-------FDSCVDTRSNPSVFVIFQKDQVYPQYVIEYTED 896
P DS VD S+P FVIF Q PQY+ T++
Sbjct: 783 PLSPGAIDGHDSVVDNVSSPETFVIFSGMQAIPQYLWTCTQE 824
>gi|226371706 poly (ADP-ribose) polymerase family, member 9 isoform
a [Homo sapiens]
Length = 854
Score = 69.3 bits (168), Expect = 2e-11
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 755 KIEKIKKIENSELLDKFTWKKSQMKEE------GKLLFYATSRAYVESICSNNFDSFLHE 808
++ K++KI+N L+ F KK M+E+ LF + +C F
Sbjct: 667 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSHRLFQQVPYQFCNVVCRVGFQRMYST 726
Query: 809 THENKYGKGIYFAKDAIYSHKNCPYDAKNV-------VMFVAQVLVGKFTEGNITYTSPP 861
+ KYG GIYF K+ KN AK + +F A+VL G F +G+ PP
Sbjct: 727 PCDPKYGAGIYFTKNL----KNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPP 782
Query: 862 PQ-------FDSCVDTRSNPSVFVIFQKDQVYPQYVIEYTED 896
P DS VD S+P FVIF Q PQY+ T++
Sbjct: 783 PLSPGAIDGHDSVVDNVSSPETFVIFSGMQAIPQYLWTCTQE 824
>gi|157738665 poly (ADP-ribose) polymerase family, member 10 [Homo
sapiens]
Length = 1025
Score = 63.5 bits (153), Expect = 8e-10
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 748 KASMKNFKIEKIKKI---ENSELLDKFTWKKSQMKEEGKLLFYATSRAYVESICSNNFDS 804
++S++ ++E++ + EL + ++ + + ++L++ T+ V IC++ F+
Sbjct: 845 RSSIRVVRVERVSHPLLQQQYELYRERLLQRCERRPVEQVLYHGTTAPAVPDICAHGFNR 904
Query: 805 FLHETHENKYGKGIYFAKDA---IYSHKNCPYDAKNVVMFVAQVLVGKFTEGNITYTSPP 861
+ YGKG+YFA+ A + + P + +FVA+VL G + +G +PP
Sbjct: 905 SFCGRNATVYGKGVYFARRASLSVQDRYSPPNADGHKAVFVARVLTGDYGQGRRGLRAPP 964
Query: 862 --------PQFDSCVDTRSNPSVFVIFQKDQVYPQYVI 891
++DS VD PS+FVIF Q P ++I
Sbjct: 965 LRGPGHVLLRYDSAVDCICQPSIFVIFHDTQALPTHLI 1002
>gi|13376842 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase 2 [Homo sapiens]
Length = 1166
Score = 48.5 bits (114), Expect = 3e-05
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 34/177 (19%)
Query: 746 HFKASMKNFKIEKIKKIENSELLDKFTWKKSQMKEEG------KLLFYATSRAYVESICS 799
H + I KI+K+ N +L +++T ++ ++ EE ++LF+ + +V +I
Sbjct: 984 HAGGIFNRYNILKIQKVCNKKLWERYTHRRKEVSEENHNHANERMLFHGSP--FVNAIIH 1041
Query: 800 NNFDSFLHETHENKYGKGIYFAKDAIYSHK---------NCP-------YDAKNVVMFVA 843
FD H +G GIYFA+++ S++ CP Y ++F
Sbjct: 1042 KGFDE-RHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPVHKDRSCYICHRQLLFCR 1100
Query: 844 QVLVGKFTEGNITYTSPPPQFDSCVDTRSNPSV-------FVIFQKDQVYPQYVIEY 893
L F + + + P V R PSV +VI++ +Q YP+Y+I Y
Sbjct: 1101 VTLGKSFLQFSAMKMAHSPPGHHSVTGR--PSVNGLALAEYVIYRGEQAYPEYLITY 1155
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 46.2 bits (108), Expect = 1e-04
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 36/170 (21%)
Query: 754 FKIEKIKKIENSELLDKFTWKKSQMKEEG------KLLFYATSRAYVESICSNNFDSFLH 807
+ + +I+K+ N +L ++F ++ ++ EE ++LF+ + ++ +I FD H
Sbjct: 1145 YNVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSP--FINAIIHKGFDE-RH 1201
Query: 808 ETHENKYGKGIYFAKDAIYSHK---------NCP-------YDAKNVVMFVAQVLVGKFT 851
+G GIYFA+++ S++ CP Y ++F L F
Sbjct: 1202 AYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSFL 1261
Query: 852 E-GNITYTSPPPQFDSCVDTRSNPSV-------FVIFQKDQVYPQYVIEY 893
+ + PP S + PSV +VI++ +Q YP+Y+I Y
Sbjct: 1262 QFSTMKMAHAPPGHHSVI---GRPSVNGLAYAEYVIYRGEQAYPEYLITY 1308
>gi|158634482 poly (ADP-ribose) polymerase family, member 3 isoform
b [Homo sapiens]
Length = 533
Score = 41.2 bits (95), Expect = 0.004
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 36/152 (23%)
Query: 738 PEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQMKEEG-----------KLLF 786
PEY + + + + N + ++ I WK +Q EE KLL+
Sbjct: 334 PEYKVIQTYLEQTGSNHRCPTLQHI----------WKVNQEGEEDRFQAHSKLGNRKLLW 383
Query: 787 YATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNCPY------DAKNV-V 839
+ T+ A V +I ++ H + GKGIYFA + + K+ Y A +V
Sbjct: 384 HGTNMAVVAAILTSGLRIMPHSG--GRVGKGIYFASE---NSKSAGYVIGMKCGAHHVGY 438
Query: 840 MFVAQVLVGK---FTEGNITYTSPPPQFDSCV 868
MF+ +V +G+ N + SPPP FDS +
Sbjct: 439 MFLGEVALGREHHINTDNPSLKSPPPGFDSVI 470
>gi|158634478 poly (ADP-ribose) polymerase family, member 3 isoform
a [Homo sapiens]
Length = 540
Score = 41.2 bits (95), Expect = 0.004
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 36/152 (23%)
Query: 738 PEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQMKEEG-----------KLLF 786
PEY + + + + N + ++ I WK +Q EE KLL+
Sbjct: 341 PEYKVIQTYLEQTGSNHRCPTLQHI----------WKVNQEGEEDRFQAHSKLGNRKLLW 390
Query: 787 YATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNCPY------DAKNV-V 839
+ T+ A V +I ++ H + GKGIYFA + + K+ Y A +V
Sbjct: 391 HGTNMAVVAAILTSGLRIMPHSG--GRVGKGIYFASE---NSKSAGYVIGMKCGAHHVGY 445
Query: 840 MFVAQVLVGK---FTEGNITYTSPPPQFDSCV 868
MF+ +V +G+ N + SPPP FDS +
Sbjct: 446 MFLGEVALGREHHINTDNPSLKSPPPGFDSVI 477
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 37.0 bits (84), Expect = 0.083
Identities = 58/247 (23%), Positives = 84/247 (34%), Gaps = 18/247 (7%)
Query: 235 SSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPVDDLT 294
SS R+ +R S S+ +G E + S SA P Q SH+ S
Sbjct: 2352 SSAVRDSGHRGSSGSQASDSEGHSEDSDTQSVSAHGQA--GPHQQSHQESTRGRSAGRSG 2409
Query: 295 RK--FTYLGSQDRARPPSGSSKATDLGGTS-----QAGTSQRFLENGSQEDLLHGNPGST 347
R F Y S + T GG QA S R + +D +HG+PGS
Sbjct: 2410 RSGSFLYQVSTHEQSESAHGRTGTSTGGRQGSHHKQARDSSRHSTSQEGQDTIHGHPGS- 2468
Query: 348 YLASNSTSAPNWKSLTSWTNDQGARRK-TVFSPTLPAARSSLGSLQTPEAVTT--RKGTG 404
+S +++ L + G+ T A+ GS + G G
Sbjct: 2469 --SSGGRQGSHYEQLVDRSGHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDG 2526
Query: 405 LLSSDYRIINGKSGTQDIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHREISSPRIQD 464
S R S + ++G T S + S S GH E S +
Sbjct: 2527 SRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSSFSQDSDSQGHSEDSE---RW 2583
Query: 465 AGPASRD 471
+G ASR+
Sbjct: 2584 SGSASRN 2590
Score = 35.0 bits (79), Expect = 0.31
Identities = 54/248 (21%), Positives = 79/248 (31%), Gaps = 19/248 (7%)
Query: 230 GPRAPSSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAP 289
G R SS R+ +R S S+ +G E + S SA P A +
Sbjct: 1374 GHRQASSAVRDSGHRGSSGSQVTNSEGHSEDSDTQSVSAHGQAGPHQQSHKESARGQSGE 1433
Query: 290 VDDLTRKFTYLGSQDRARPPSGSSKATDLGGT-----SQAGTSQRFLENGSQEDLLHGNP 344
+R F Y S + A GG QA S R + +D + G+P
Sbjct: 1434 SSGRSRSFLYQVSSHEQSESTHGQTAPSTGGRQGSRHEQARNSSRHSASQDGQDTIRGHP 1493
Query: 345 GSTYLASNSTSAPNWKSLTSWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRK--- 401
G S+ S + D+ S T P RS Q+ +R+
Sbjct: 1494 G-------SSRGGRQGSYHEQSVDRSGHSGYHHSHTTPQGRSDASHGQSGPRSASRQTRN 1546
Query: 402 ----GTGLLSSDYRIINGKSGTQDIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHREI 457
G G S R + + + + G T S++ S GH E
Sbjct: 1547 EEQSGDGSRHSGSRHHEPSTRAGSSRHSQVGQGESAGSKTSRRQGSSVSQDRDSEGHSED 1606
Query: 458 SSPRIQDA 465
S R + A
Sbjct: 1607 SERRSESA 1614
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 36.2 bits (82), Expect = 0.14
Identities = 58/243 (23%), Positives = 89/243 (36%), Gaps = 51/243 (20%)
Query: 229 PGPRA---PSSHRRNMAYRARSKS-----RDRFFQGSQEFLASASASAERSCTPSPDQIS 280
P P+A P+ R + R S+S RD QGS + S + +R+ T
Sbjct: 523 PEPKAHYEPADRAREVPVRTTSRSPVLSRRDSPLQGSGQ---QNSQAGQRNST------- 572
Query: 281 HRASLEDAPVDDLTRKFTYLGSQDRARPPSGSSKATDLGGT-------SQAGTSQRFLEN 333
+S+E + + K RP SGSS + G+ SQ+G+ +RF
Sbjct: 573 --SSIEPRLLWERVEKLV-------PRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVR 623
Query: 334 GSQEDLLHGNPGSTYLASNSTSAPNWKSLTSWTNDQGARRKTVFSPTLPAARSSLGSLQT 393
S + G+P N+ P K K VF P PA L +L
Sbjct: 624 SSSKS--EGSPSQRL--ENAVKKPEDK-------------KEVFRPLKPAGEVDLTALAK 666
Query: 394 PEAVTTRKGTGLLSSDYRIINGKSGTQDIQPGPLFNNNADGVATDITSTRSLNYKSTSSG 453
+DY + +SGT D + + AD + TR+ + + S+G
Sbjct: 667 ELRAVEDVRPPHKVTDYSSSSEESGTTDEEDDDVEQEGADESTSGPEDTRAASSLNLSNG 726
Query: 454 HRE 456
E
Sbjct: 727 ETE 729
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 35.8 bits (81), Expect = 0.18
Identities = 60/284 (21%), Positives = 105/284 (36%), Gaps = 31/284 (10%)
Query: 231 PRAPSSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPV 290
PR+P++ + + S + S+ +A + + TP + S +
Sbjct: 973 PRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGST 1032
Query: 291 DD--LTRKFTYLGSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTY 348
D L T G + SS +TD T+ + S L G + H NPGST+
Sbjct: 1033 DTTLLPASTTTSGPSQESTTSHSSSGSTD---TALSPGSTTALSFGQESTTFHSNPGSTH 1089
Query: 349 --LASNSTSAPNWKSLTSWTNDQGARRKTVFSP---TLPAARSSLGSLQTPEAVTTRKGT 403
L +ST++ ++ + +T SP T P + + QT A T +
Sbjct: 1090 TTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPS 1149
Query: 404 GLLSSDYRIINGKSGTQDIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHRE-----IS 458
++ + +S T PG T T ST+SGH E S
Sbjct: 1150 PPSTATAPV--EESTTYHRSPGS-------------TPTTHFPASSTTSGHSEKSTIFHS 1194
Query: 459 SPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSS 502
SP P+S +GR + R++ + ++ + +T++
Sbjct: 1195 SPDASGTTPSSAHSTTSGR-GESTTSRISPGSTEITTLPGSTTT 1237
Score = 35.8 bits (81), Expect = 0.18
Identities = 65/302 (21%), Positives = 108/302 (35%), Gaps = 45/302 (14%)
Query: 228 PPGPRAPSSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLED 287
P P PS ++ + +S D S S+ S E S + S +H + D
Sbjct: 2511 PGSPTTPSLSEKSTTFYTSPRSPDATL--SPATTTSSGVSEESSTSHSQPGSTHTTAFPD 2568
Query: 288 APVDD-----LTRKFTYLGSQDRARPP-----SGSSKATDLGGTSQAGT-------SQRF 330
+ T + GS D P SG S+ + +S T S
Sbjct: 2569 STTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTALSPGSTTA 2628
Query: 331 LENGSQEDLLHGNPGSTY--LASNSTSAPNWKSLTSWTNDQGARRKTVFSP---TLPAAR 385
L G + H +PGST+ L +ST++ ++ + +T SP T P +
Sbjct: 2629 LSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQ 2688
Query: 386 SSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGTQDIQPGPLFNNNADGVATDITSTRSL 445
+ QT A T + ++ + +S T PG T T
Sbjct: 2689 GESTTFQTHPASTHTTPSPPSTATAPV--EESTTYHRSPGS-------------TPTTHF 2733
Query: 446 NYKSTSSGHRE-----ISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTT 500
ST+SGH E SSP P+S +GR + R++ + ++ + +T
Sbjct: 2734 PASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGR-GESTTSRISPGSTEITTLPGST 2792
Query: 501 SS 502
++
Sbjct: 2793 TT 2794
Score = 35.8 bits (81), Expect = 0.18
Identities = 60/284 (21%), Positives = 106/284 (37%), Gaps = 31/284 (10%)
Query: 231 PRAPSSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPV 290
PR+P++ + + S + S+ +A + + TP + S +
Sbjct: 3613 PRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGST 3672
Query: 291 DD--LTRKFTYLGSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTY 348
D L T GS + SS +TD T+ + S L G + H +PGST+
Sbjct: 3673 DTTLLPASTTTSGSSQESTTSHSSSGSTD---TALSPGSTTALSFGQESTTFHSSPGSTH 3729
Query: 349 --LASNSTSAPNWKSLTSWTNDQGARRKTVFSP---TLPAARSSLGSLQTPEAVTTRKGT 403
L +ST++ ++ + +T SP T P + + QT A T +
Sbjct: 3730 TTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPS 3789
Query: 404 GLLSSDYRIINGKSGTQDIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHRE-----IS 458
++ + +S T PG T T ST+SGH E S
Sbjct: 3790 PPSTATAPV--EESTTYHRSPGS-------------TPTTHFPASSTTSGHSEKSTIFHS 3834
Query: 459 SPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSS 502
SP P+S +GR + R++ + ++ + +T++
Sbjct: 3835 SPDASGTTPSSAHSTTSGR-GESTTSRISPGSTEITTLPGSTTT 3877
Score = 32.0 bits (71), Expect = 2.7
Identities = 58/284 (20%), Positives = 104/284 (36%), Gaps = 31/284 (10%)
Query: 231 PRAPSSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPV 290
PR+P++ + + S + S+ +A + + TP + S +
Sbjct: 2056 PRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGST 2115
Query: 291 DD--LTRKFTYLGSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTY 348
D L T G + S +TD T+ + S L G + H +PGST+
Sbjct: 2116 DTTLLPASTTTSGPSQESTTSHSSPGSTD---TALSPGSTTALSFGQESTTFHSSPGSTH 2172
Query: 349 --LASNSTSAPNWKSLTSWTNDQGARRKTVFSP---TLPAARSSLGSLQTPEAVTTRKGT 403
L +ST++ ++ + +T SP T P + + QT A T +
Sbjct: 2173 TTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPS 2232
Query: 404 GLLSSDYRIINGKSGTQDIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHRE-----IS 458
++ + +S T PG T T ST+SGH E S
Sbjct: 2233 PPSTATAPV--EESTTYHRSPGS-------------TPTTHFPASSTTSGHSEKSTIFHS 2277
Query: 459 SPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSS 502
SP P+S +GR + R++ + ++ + +T++
Sbjct: 2278 SPDASGTTPSSAHSTTSGR-GESTTSRISPGSTEITTLPGSTTT 2320
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 35.8 bits (81), Expect = 0.18
Identities = 60/284 (21%), Positives = 105/284 (36%), Gaps = 31/284 (10%)
Query: 231 PRAPSSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPV 290
PR+P++ + + S + S+ +A + + TP + S +
Sbjct: 460 PRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGST 519
Query: 291 DD--LTRKFTYLGSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTY 348
D L T G + SS +TD T+ + S L G + H NPGST+
Sbjct: 520 DTTLLPASTTTSGPSQESTTSHSSSGSTD---TALSPGSTTALSFGQESTTFHSNPGSTH 576
Query: 349 --LASNSTSAPNWKSLTSWTNDQGARRKTVFSP---TLPAARSSLGSLQTPEAVTTRKGT 403
L +ST++ ++ + +T SP T P + + QT A T +
Sbjct: 577 TTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPS 636
Query: 404 GLLSSDYRIINGKSGTQDIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHRE-----IS 458
++ + +S T PG T T ST+SGH E S
Sbjct: 637 PPSTATAPV--EESTTYHRSPGS-------------TPTTHFPASSTTSGHSEKSTIFHS 681
Query: 459 SPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSS 502
SP P+S +GR + R++ + ++ + +T++
Sbjct: 682 SPDASGTTPSSAHSTTSGR-GESTTSRISPGSTEITTLPGSTTT 724
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 35.0 bits (79), Expect = 0.31
Identities = 61/251 (24%), Positives = 91/251 (36%), Gaps = 26/251 (10%)
Query: 230 GPRAPSSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAP 289
G + S+ + + +S + G+ E + AS+ R+ P PD H D
Sbjct: 6658 GLKGTSTSQDPIVSTEKSAVLHKLTTGATETSRTEVASSRRTSIPGPD---HSTESPDIS 6714
Query: 290 VDDLTRKFTYLGSQDRARPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYL 349
+ + LG + + + LG TSQ GT S H +
Sbjct: 6715 TEVIPSLPISLGITESSNMTIITRTGPPLGSTSQ-GTFTLDTPTTSSRAGTHSMATQEFP 6773
Query: 350 ASNSTSAPNWK-SLTSWTNDQGARRKTVFSPTL---PAARSSLGSLQTPEAVTTRKG--T 403
S T+ N + SWT KT FS +L PA S S P+ + T T
Sbjct: 6774 HSEMTTVMNKDPEILSWTIPPSIE-KTSFSSSLMPSPAMTSPPVSSTLPKTIHTTPSPMT 6832
Query: 404 GLLSSDYRIINGKSGTQD----IQPGPLFNNNADGVATD-----------ITSTRSLNYK 448
LL+ + GT P L + + + + TD TST + N +
Sbjct: 6833 SLLTPSLVMTTDTLGTSPEPTTSSPPNLSSTSHEILTTDEDTTAIEAMHPSTSTAATNVE 6892
Query: 449 STSSGHREISS 459
+TSSGH SS
Sbjct: 6893 TTSSGHGSQSS 6903
Score = 32.7 bits (73), Expect = 1.6
Identities = 71/344 (20%), Positives = 119/344 (34%), Gaps = 52/344 (15%)
Query: 206 GLNPDVVQN--IQDICNSKHMQKNPPGPRAPSSHRRNMAYRARSKSRDRFFQGSQEFLAS 263
G +PDV I + + P G + +S + S S E L +
Sbjct: 3441 GASPDVTNTLYITSTAQTTSLVSLPSGDQGITSLTNPSGGKTSSASSVTSPSIGLETLRA 3500
Query: 264 ASASAERSCTPSPDQISHRASLEDAPVDDLTRKFTYLGSQDRARPPSGSSKATDLGGTSQ 323
++ + P+ +S +S + + D+T P G S GT+
Sbjct: 3501 NVSAVKSDIAPTAGHLSQTSSPAEVSILDVT-----------TAPTPGISTTITTMGTNS 3549
Query: 324 AGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWKSLT---SWT-NDQGARRKTVFSP 379
T+ E G + P + +++ W S SWT D + K SP
Sbjct: 3550 ISTTTPNPEVGMST--MDSTPATERRTTSTEHPSTWSSTAASDSWTVTDMTSNLKVARSP 3607
Query: 380 ---------TLPAARSSLGSLQTPEAVTTRKGTGLL--SSDYRIINGKSGTQDIQPGPLF 428
+ A+ + L S+ TP T GT L+ SSD + ++ T + P
Sbjct: 3608 GTISTMHTTSFLASSTELDSMSTPHGRITVIGTSLVTPSSDASAVKTETSTSERTLSP-- 3665
Query: 429 NNNADGVATDITSTRSLNYKSTSSGHREIS---SPRIQDAGPASRDVQATGRIADDADPR 485
+D A+ ST S + + S +S +P +A + +T + DP
Sbjct: 3666 ---SDTTASTPISTFSRVQRMSISVPDILSTSWTPSSTEAEDVPVSMVSTDHASTKTDPN 3722
Query: 486 VAL--------------VNDSLSDVTSTTSSRVDDHDSEEICLD 515
L SLS T+TTS+ +E+ L+
Sbjct: 3723 TPLSTFLFDSLSTLDWDTGRSLSSATATTSAPQGATTPQELTLE 3766
Score = 30.4 bits (67), Expect = 7.8
Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)
Query: 309 PSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPN-----WKSLT 363
PS S T T G + +GS PG L++ + S P+ + S T
Sbjct: 10280 PSLSEAMTSFATT---GVPRAISGSGSPFSRTESGPGDATLSTIAESLPSSTPVPFSSST 10336
Query: 364 SWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGTQDIQ 423
T D S T+PA S TP V T GT +++ R++ + Q
Sbjct: 10337 FTTTD---------SSTIPALHEITSSSATPYRVDTSLGTESSTTEGRLVMVSTLDTSSQ 10387
Query: 424 PGPLFNNNADGVATDITSTRSLNYKSTSSGHR 455
PG + D T S+ + +S ++
Sbjct: 10388 PG----RTSSSPILDTRMTESVELGTVTSAYQ 10415
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 34.7 bits (78), Expect = 0.41
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 604 TTKWIWYWKNESGTWIQYGEEKDKRKNSNVDSSYLESLYQSCPRGVVPFQAGSRNYELSF 663
+ W W+ + SG W Y NS +DS++ V F AG R Y + F
Sbjct: 1614 SNNWRWF-DDRSGRWCSYSASN----NSTIDSAWKSG------ETSVRFTAGRRRYTVQF 1662
Query: 664 QGMIQTNIASKTQKDVIRRPTFVPQ 688
M+Q N + ++ V+ VP+
Sbjct: 1663 TTMVQVNEETGNRRPVMLTLLRVPR 1687
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 34.7 bits (78), Expect = 0.41
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 24/157 (15%)
Query: 307 RPPSGSSKATDLGGT-------SQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNW 359
RP SGSS + G+ SQ+G+ +RF S + G+P N+ P
Sbjct: 644 RPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKS--EGSPSQRL--ENAVKKPED 699
Query: 360 KSLTSWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGT 419
K K VF P PA L +L +DY + +SGT
Sbjct: 700 K-------------KEVFRPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGT 746
Query: 420 QDIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHRE 456
D + + AD + TR+ + + S+G E
Sbjct: 747 TDEEDDDVEQEGADESTSGPEDTRAASSLNLSNGETE 783
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 34.7 bits (78), Expect = 0.41
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 24/157 (15%)
Query: 307 RPPSGSSKATDLGGT-------SQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNW 359
RP SGSS + G+ SQ+G+ +RF S + G+P N+ P
Sbjct: 752 RPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKS--EGSPSQRL--ENAVKKPED 807
Query: 360 KSLTSWTNDQGARRKTVFSPTLPAARSSLGSLQTPEAVTTRKGTGLLSSDYRIINGKSGT 419
K K VF P PA L +L +DY + +SGT
Sbjct: 808 K-------------KEVFRPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGT 854
Query: 420 QDIQPGPLFNNNADGVATDITSTRSLNYKSTSSGHRE 456
D + + AD + TR+ + + S+G E
Sbjct: 855 TDEEDDDVEQEGADESTSGPEDTRAASSLNLSNGETE 891
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 34.7 bits (78), Expect = 0.41
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 21/139 (15%)
Query: 232 RAPSSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPVD 291
R+ S RR +R+RS R + ++ +R T SP + SHR S +
Sbjct: 213 RSDSGSRRKRRHRSRSSKCKRKEKNKEK---------KRPHTESPGRRSHRHSSGSSHSP 263
Query: 292 DLTRKFTYLGSQDRARPP------------SGSSKATDLGGTSQAGTSQRFLENGSQEDL 339
L+ ++ S R P S S++ G S G+ QR +G +
Sbjct: 264 SLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGA 323
Query: 340 LHGNPGSTYLASNSTSAPN 358
G PGS + + S+P+
Sbjct: 324 HGGRPGSAHSPPDKPSSPS 342
>gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo
sapiens]
Length = 1724
Score = 33.5 bits (75), Expect = 0.92
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 803 DSFLHETHENKYGKGIYFAKDAIYSHK-NCPYDAKNV-VMFVAQVLVGK---FTEGNITY 857
D + T G GIYF+ S K + P + ++ + V +GK E + +
Sbjct: 461 DRGVQRTDVGNLGSGIYFSDSLSTSIKYSHPGETDGTRLLLICDVALGKCMDLHEKDFSL 520
Query: 858 TSPPPQFDSCVDTRSNPSV--------FVIFQKDQVYPQYVIEYT 894
T PP +DS SV FV+++ +QV +Y+I+++
Sbjct: 521 TEAPPGYDSVHGVSQTASVTTDFEDDEFVVYKTNQVKMKYIIKFS 565
>gi|17149830 G protein-coupled receptor kinase interacting ArfGAP 2
isoform 1 [Homo sapiens]
Length = 759
Score = 33.5 bits (75), Expect = 0.92
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 252 RFFQGSQEFLASASASAERSCTPSPDQISHRASLEDAPV-DDLTRKFTYLGSQDRARPPS 310
R Q + L S +++ + T + Q+ + D L R+ + GS+ + +
Sbjct: 459 RIMQKKLQTLQSENSNLRKQATTNVYQVQTGSEYTDTSNHSSLKRRPSARGSRPMSMYET 518
Query: 311 GSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWKSLTSWTNDQG 370
GS + L G + R E+ + + G + L ++S+S P++ S SW+ D+
Sbjct: 519 GSGQKPYL----PMGEASRPEESRMRLQPFPAHIGRSALVTSSSSLPSFPSTLSWSRDES 574
Query: 371 ARR 373
ARR
Sbjct: 575 ARR 577
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,484,706
Number of Sequences: 37866
Number of extensions: 1747001
Number of successful extensions: 4977
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 4868
Number of HSP's gapped (non-prelim): 83
length of query: 902
length of database: 18,247,518
effective HSP length: 111
effective length of query: 791
effective length of database: 14,044,392
effective search space: 11109114072
effective search space used: 11109114072
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.