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Search of human proteins with 27436971
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27436971 potassium voltage-gated channel, shaker-related
subfamily, beta member 3 [Homo sapiens]
(404 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27436971 potassium voltage-gated channel, shaker-related subf... 825 0.0
gi|27436964 potassium voltage-gated channel, shaker-related subf... 550 e-157
gi|27436962 potassium voltage-gated channel, shaker-related subf... 526 e-149
gi|27436969 potassium voltage-gated channel, shaker-related subf... 521 e-148
gi|27436966 potassium voltage-gated channel, shaker-related subf... 520 e-147
gi|4504825 potassium voltage-gated channel, shaker-related subfa... 516 e-146
gi|223718702 aflatoxin B1 aldehyde reductase 3 isoform 1 [Homo s... 78 1e-14
gi|41327764 aldo-keto reductase family 7, member A2 [Homo sapiens] 77 2e-14
gi|41152114 aldo-keto reductase family 7, member A3 [Homo sapiens] 70 3e-12
gi|223718708 aflatoxin B1 aldehyde reductase 3 isoform 2 [Homo s... 54 3e-07
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 48 2e-05
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 48 2e-05
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 48 2e-05
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 44 3e-04
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 42 0.001
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 42 0.001
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 40 0.004
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 40 0.005
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 39 0.006
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|194363768 homeobox D9 [Homo sapiens] 39 0.008
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 39 0.008
gi|50233789 cancer/testis antigen 2 isoform LAGE-1a [Homo sapiens] 38 0.014
gi|10337609 cancer/testis antigen 2 isoform LAGE-1b [Homo sapiens] 38 0.014
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2... 38 0.014
gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1... 38 0.014
gi|13994190 frizzled 8 [Homo sapiens] 38 0.014
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 38 0.014
>gi|27436971 potassium voltage-gated channel, shaker-related
subfamily, beta member 3 [Homo sapiens]
Length = 404
Score = 825 bits (2130), Expect = 0.0
Identities = 404/404 (100%), Positives = 404/404 (100%)
Query: 1 MQVSIACTEQNLRSRSSEDRLCGPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPR 60
MQVSIACTEQNLRSRSSEDRLCGPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPR
Sbjct: 1 MQVSIACTEQNLRSRSSEDRLCGPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPR 60
Query: 61 PPAPAGALRESTGRGTGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEH 120
PPAPAGALRESTGRGTGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEH
Sbjct: 61 PPAPAGALRESTGRGTGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEH 120
Query: 121 GVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEG 180
GVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEG
Sbjct: 121 GVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEG 180
Query: 181 LRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAY 240
LRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAY
Sbjct: 181 LRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAY 240
Query: 241 SMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRV 300
SMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRV
Sbjct: 241 SMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRV 300
Query: 301 PDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSS 360
PDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSS
Sbjct: 301 PDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSS 360
Query: 361 VLLGVSSAEQLIEHLGALQVLSQLTPQTVMEIDGLLGNKPHSKK 404
VLLGVSSAEQLIEHLGALQVLSQLTPQTVMEIDGLLGNKPHSKK
Sbjct: 361 VLLGVSSAEQLIEHLGALQVLSQLTPQTVMEIDGLLGNKPHSKK 404
>gi|27436964 potassium voltage-gated channel, shaker-related
subfamily, beta member 1 isoform 3 [Homo sapiens]
Length = 401
Score = 550 bits (1417), Expect = e-157
Identities = 277/410 (67%), Positives = 329/410 (80%), Gaps = 19/410 (4%)
Query: 1 MQVSIACTEQNLRSRSSEDRLCGPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARA-ALVP 59
MQVSIACTE NL+SR+ EDRL + P + K R A++
Sbjct: 1 MQVSIACTEHNLKSRNGEDRLLSKQSSTA-------------PNVVNAARAKFRTVAIIA 47
Query: 60 RP-----PAPAGALRESTGRGTGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVL 114
R P +L+EST + TGMKYRNLGKSGLRVSCLGLGTWVTFG QISDE AE ++
Sbjct: 48 RSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLM 107
Query: 115 TVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSR 174
T+AYE GVNLFDTAEVYAAGKAE LG+I+K KGWRRSS VITTK++WGG+AETERGLSR
Sbjct: 108 TIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSR 167
Query: 175 KHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAA 234
KHIIEGL+GSL+RLQL YVD+VFANR D N PMEEIVRAMT+VINQG+A+YWGTSRW A
Sbjct: 168 KHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAM 227
Query: 235 EIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITS 294
EIMEAYS+ARQFN+IPPVCEQAE+HLFQREKVE+QLPELYHKIGVG++TW PLACG+I+
Sbjct: 228 EIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISG 287
Query: 295 KYDGRVPDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLR 354
KY VP++ RAS+K YQWLK+++ SE+G+KQQ K+ DL P+A +LGCT+ QLA+AWCLR
Sbjct: 288 KYGNGVPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLR 347
Query: 355 SEGVSSVLLGVSSAEQLIEHLGALQVLSQLTPQTVMEIDGLLGNKPHSKK 404
+EGVSSVLLG S+ EQLIE+LGA+QVL ++T V EID +L NKP+SKK
Sbjct: 348 NEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKK 397
>gi|27436962 potassium voltage-gated channel, shaker-related
subfamily, beta member 1 isoform 2 [Homo sapiens]
Length = 408
Score = 526 bits (1355), Expect = e-149
Identities = 252/338 (74%), Positives = 298/338 (88%)
Query: 67 ALRESTGRGTGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFD 126
+L+E+T TGM YRNLGKSGLRVSCLGLGTWVTFG QISDE AE ++T+AYE GVNLFD
Sbjct: 67 SLQETTRAETGMAYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFD 126
Query: 127 TAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLE 186
TAEVYAAGKAE LG+I+K KGWRRSS VITTK++WGG+AETERGLSRKHIIEGL+GSL+
Sbjct: 127 TAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQ 186
Query: 187 RLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQF 246
RLQL YVD+VFANR D N PMEEIVRAMT+VINQG+A+YWGTSRW A EIMEAYS+ARQF
Sbjct: 187 RLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQF 246
Query: 247 NLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRVPDTCRA 306
N+IPPVCEQAE+HLFQREKVE+QLPELYHKIGVG++TW PLACG+I+ KY VP++ RA
Sbjct: 247 NMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRA 306
Query: 307 SIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVS 366
S+K YQWLK+++ SE+G+KQQ K+ DL P+A +LGCT+ QLA+AWCLR+EGVSSVLLG S
Sbjct: 307 SLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSS 366
Query: 367 SAEQLIEHLGALQVLSQLTPQTVMEIDGLLGNKPHSKK 404
+ EQLIE+LGA+QVL ++T V EID +L NKP+SKK
Sbjct: 367 TPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKK 404
>gi|27436969 potassium voltage-gated channel, shaker-related
subfamily, beta member 2 isoform 2 [Homo sapiens]
Length = 353
Score = 521 bits (1341), Expect = e-148
Identities = 247/342 (72%), Positives = 297/342 (86%), Gaps = 1/342 (0%)
Query: 63 APAGALRESTGRGTGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGV 122
+PA TG GM YRNLGKSGLRVSCLGLGTWVTFG QI+DE AE ++T+AY++G+
Sbjct: 9 SPARLSLRQTG-SPGMIYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGI 67
Query: 123 NLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLR 182
NLFDTAEVYAAGKAE LGNI+K KGWRRSS VITTKIFWGG+AETERGLSRKHIIEGL+
Sbjct: 68 NLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLK 127
Query: 183 GSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSM 242
SLERLQL YVD+VFANR DPN PMEE VRAMT+VINQG+A+YWGTSRW + EIMEAYS+
Sbjct: 128 ASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSV 187
Query: 243 ARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRVPD 302
ARQFNL PP+CEQAE+H+FQREKVE+QLPEL+HKIGVG++TW PLACG+++ KYD +P
Sbjct: 188 ARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPP 247
Query: 303 TCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVL 362
RAS+KGYQWLKDK+ SE+G++QQAK+ +L +A +LGCT+ QLAIAWCLR+EGVSSVL
Sbjct: 248 YSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVL 307
Query: 363 LGVSSAEQLIEHLGALQVLSQLTPQTVMEIDGLLGNKPHSKK 404
LG S+A+QL+E++GA+QVL +L+ + EID +LGNKP+SKK
Sbjct: 308 LGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPYSKK 349
>gi|27436966 potassium voltage-gated channel, shaker-related
subfamily, beta member 1 isoform 1 [Homo sapiens]
Length = 419
Score = 520 bits (1338), Expect = e-147
Identities = 248/329 (75%), Positives = 292/329 (88%)
Query: 76 TGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGK 135
TGM +RNLGKSGLRVSCLGLGTWVTFG QISDE AE ++T+AYE GVNLFDTAEVYAAGK
Sbjct: 87 TGMPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGK 146
Query: 136 AERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLERLQLGYVDI 195
AE LG+I+K KGWRRSS VITTK++WGG+AETERGLSRKHIIEGL+GSL+RLQL YVD+
Sbjct: 147 AEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDV 206
Query: 196 VFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQ 255
VFANR D N PMEEIVRAMT+VINQG+A+YWGTSRW A EIMEAYS+ARQFN+IPPVCEQ
Sbjct: 207 VFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 266
Query: 256 AEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRVPDTCRASIKGYQWLK 315
AE+HLFQREKVE+QLPELYHKIGVG++TW PLACG+I+ KY VP++ RAS+K YQWLK
Sbjct: 267 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 326
Query: 316 DKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLIEHL 375
+++ SE+G+KQQ K+ DL P+A +LGCT+ QLA+AWCLR+EGVSSVLLG S+ EQLIE+L
Sbjct: 327 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 386
Query: 376 GALQVLSQLTPQTVMEIDGLLGNKPHSKK 404
GA+QVL ++T V EID +L NKP+SKK
Sbjct: 387 GAIQVLPKMTSHVVNEIDNILRNKPYSKK 415
>gi|4504825 potassium voltage-gated channel, shaker-related
subfamily, beta member 2 isoform 1 [Homo sapiens]
Length = 367
Score = 516 bits (1330), Expect = e-146
Identities = 241/325 (74%), Positives = 290/325 (89%)
Query: 80 YRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERT 139
YRNLGKSGLRVSCLGLGTWVTFG QI+DE AE ++T+AY++G+NLFDTAEVYAAGKAE
Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVV 98
Query: 140 LGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFAN 199
LGNI+K KGWRRSS VITTKIFWGG+AETERGLSRKHIIEGL+ SLERLQL YVD+VFAN
Sbjct: 99 LGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFAN 158
Query: 200 RSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHH 259
R DPN PMEE VRAMT+VINQG+A+YWGTSRW + EIMEAYS+ARQFNL PP+CEQAE+H
Sbjct: 159 RPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYH 218
Query: 260 LFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRVPDTCRASIKGYQWLKDKVQ 319
+FQREKVE+QLPEL+HKIGVG++TW PLACG+++ KYD +P RAS+KGYQWLKDK+
Sbjct: 219 MFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKIL 278
Query: 320 SEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLIEHLGALQ 379
SE+G++QQAK+ +L +A +LGCT+ QLAIAWCLR+EGVSSVLLG S+A+QL+E++GA+Q
Sbjct: 279 SEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQ 338
Query: 380 VLSQLTPQTVMEIDGLLGNKPHSKK 404
VL +L+ + EID +LGNKP+SKK
Sbjct: 339 VLPKLSSSIIHEIDSILGNKPYSKK 363
>gi|223718702 aflatoxin B1 aldehyde reductase 3 isoform 1 [Homo
sapiens]
Length = 331
Score = 78.2 bits (191), Expect = 1e-14
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 22/292 (7%)
Query: 102 GSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIF 161
G ++ T+ V E G DTA +Y+ G++E LG + G R S KI
Sbjct: 20 GRRMDAPTSAAVTRAFLERGHTEIDTAFLYSDGQSETILGGL----GLRMGSSDCRVKIA 75
Query: 162 WGGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQG 221
L + L SL+RLQ VD+ + + D + P+EE +RA + +G
Sbjct: 76 TKANPWIGNSLKPDSVRSQLETSLKRLQCPUVDLFYLHAPDHSAPVEETLRACHQLHQEG 135
Query: 222 LALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGS 281
+ G S + A E+ E ++ + I P Q + R+ VE +L G+
Sbjct: 136 KFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYSATTRQ-VETELFPCLRHFGLRF 194
Query: 282 VTWYPLACGLITSKY-----DGRVPDTCRASIKGYQW---LKDKVQSEDGKKQQAKVMDL 333
+ PLA GL+T KY DG+ P G QW ++ E + A V
Sbjct: 195 YAYNPLAGGLLTGKYKYEDKDGKQP---VGRFFGTQWAEIYRNHFWKEHHFEGIALVEKA 251
Query: 334 LPVAHQLGC-TVAQLAIAWC-----LRSEGVSSVLLGVSSAEQLIEHLGALQ 379
L A+ ++ A+ W L+ +V+LG+SS EQL ++L A +
Sbjct: 252 LQAAYGASAPSMTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAAAE 303
>gi|41327764 aldo-keto reductase family 7, member A2 [Homo sapiens]
Length = 359
Score = 77.4 bits (189), Expect = 2e-14
Identities = 87/341 (25%), Positives = 142/341 (41%), Gaps = 44/341 (12%)
Query: 51 PKARAALVPRPPAPAGALRESTGRGTGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETA 110
P+ARA + RPP P RV+ + LGT + G ++ +
Sbjct: 23 PEARALAMSRPPPP------------------------RVASV-LGT-MEMGRRMDAPAS 56
Query: 111 EDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIF-WGGQAETE 169
+ E G DTA +Y+ G++E LG + G I TK W G++
Sbjct: 57 AAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKANPWDGKS--- 113
Query: 170 RGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTS 229
L + L SL+RLQ VD+ + + D P+EE + A + +G + G S
Sbjct: 114 --LKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLS 171
Query: 230 RWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLAC 289
+ + E+ E ++ + I P Q ++ R+ VE +L G+ + PLA
Sbjct: 172 NYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQ-VETELFPCLRHFGLRFYAYNPLAG 230
Query: 290 GLITSKY-----DGRVPDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGC-T 343
GL+T KY DG+ P + +++ E + A V L A+ +
Sbjct: 231 GLLTGKYKYEDKDGKQPVGRFFGNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPS 290
Query: 344 VAQLAIAWC-----LRSEGVSSVLLGVSSAEQLIEHLGALQ 379
V A+ W L+ +V+LG+SS EQL ++L A +
Sbjct: 291 VTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAATE 331
>gi|41152114 aldo-keto reductase family 7, member A3 [Homo sapiens]
Length = 331
Score = 70.5 bits (171), Expect = 3e-12
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 16/289 (5%)
Query: 102 GSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIF 161
G ++ T+ V E G DTA VY+ G++E LG + G I TK
Sbjct: 20 GRRMDAPTSAAVTRAFLERGHTEIDTAFVYSEGQSETILGGLGLRLGGSDCRVKIDTKAI 79
Query: 162 WGGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQG 221
L + L SL+RLQ VD+ + + D + P+EE +RA + +G
Sbjct: 80 ----PLFGNSLKPDSLRFQLETSLKRLQCPRVDLFYLHMPDHSTPVEETLRACHQLHQEG 135
Query: 222 LALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGS 281
+ G S + A E+ E ++ + I P Q ++ R+ VE +L G+
Sbjct: 136 KFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYNAITRQ-VETELFPCLRHFGLRF 194
Query: 282 VTWYPLACGLITSKY-----DGRVPDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPV 336
+ PLA GL+T KY +G+ P + +++ E + A V L
Sbjct: 195 YAFNPLAGGLLTGKYKYEDKNGKQPVGRFFGNTWAEMYRNRYWKEHHFEGIALVEKALQA 254
Query: 337 AHQLGC-TVAQLAIAWC-----LRSEGVSSVLLGVSSAEQLIEHLGALQ 379
A+ ++ + W L+ +V+LG+SS EQL ++L A +
Sbjct: 255 AYGASAPSMTSATLRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAAAE 303
>gi|223718708 aflatoxin B1 aldehyde reductase 3 isoform 2 [Homo
sapiens]
Length = 249
Score = 53.9 bits (128), Expect = 3e-07
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 102 GSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIF 161
G ++ T+ V E G DTA +Y+ G++E LG + G R S KI
Sbjct: 20 GRRMDAPTSAAVTRAFLERGHTEIDTAFLYSDGQSETILGGL----GLRMGSSDCRVKIA 75
Query: 162 WGGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQG 221
L + L SL+RLQ VD+ + + D + P+EE +RA + +G
Sbjct: 76 TKANPWIGNSLKPDSVRSQLETSLKRLQCPUVDLFYLHAPDHSAPVEETLRACHQLHQEG 135
Query: 222 LALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQ 255
+ G S + A E+ E ++ + I P Q
Sbjct: 136 KFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQ 169
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 47.8 bits (112), Expect = 2e-05
Identities = 26/56 (46%), Positives = 28/56 (50%)
Query: 25 RPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTGMKY 80
RPG GGG GG GGG G+ GGGG G A A A A A + G G G Y
Sbjct: 245 RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Score = 42.0 bits (97), Expect = 0.001
Identities = 23/54 (42%), Positives = 24/54 (44%)
Query: 24 PRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTG 77
P G GGG GG GGG G GGGG+G A A A A G G G
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
Score = 37.4 bits (85), Expect = 0.024
Identities = 21/55 (38%), Positives = 23/55 (41%)
Query: 23 GPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTG 77
G G GGG GG G G G GG G+G A+ A A A G G G
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
Score = 29.6 bits (65), Expect = 5.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 28 PGGGNGGPAGGGHGNPPGGGGSG 50
PG G GGG G GGGGSG
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSG 263
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 47.8 bits (112), Expect = 2e-05
Identities = 26/56 (46%), Positives = 28/56 (50%)
Query: 25 RPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTGMKY 80
RPG GGG GG GGG G+ GGGG G A A A A A + G G G Y
Sbjct: 245 RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Score = 42.0 bits (97), Expect = 0.001
Identities = 23/54 (42%), Positives = 24/54 (44%)
Query: 24 PRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTG 77
P G GGG GG GGG G GGGG+G A A A A G G G
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
Score = 37.4 bits (85), Expect = 0.024
Identities = 21/55 (38%), Positives = 23/55 (41%)
Query: 23 GPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTG 77
G G GGG GG G G G GG G+G A+ A A A G G G
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
Score = 29.6 bits (65), Expect = 5.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 28 PGGGNGGPAGGGHGNPPGGGGSG 50
PG G GGG G GGGGSG
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSG 263
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 47.8 bits (112), Expect = 2e-05
Identities = 26/56 (46%), Positives = 28/56 (50%)
Query: 25 RPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTGMKY 80
RPG GGG GG GGG G+ GGGG G A A A A A + G G G Y
Sbjct: 245 RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Score = 42.0 bits (97), Expect = 0.001
Identities = 23/54 (42%), Positives = 24/54 (44%)
Query: 24 PRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTG 77
P G GGG GG GGG G GGGG+G A A A A G G G
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
Score = 37.4 bits (85), Expect = 0.024
Identities = 21/55 (38%), Positives = 23/55 (41%)
Query: 23 GPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTG 77
G G GGG GG G G G GG G+G A+ A A A G G G
Sbjct: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
Score = 29.6 bits (65), Expect = 5.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 28 PGGGNGGPAGGGHGNPPGGGGSG 50
PG G GGG G GGGGSG
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSG 263
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 43.9 bits (102), Expect = 3e-04
Identities = 19/29 (65%), Positives = 19/29 (65%)
Query: 23 GPRPGPGGGNGGPAGGGHGNPPGGGGSGP 51
G PG GGG GG GGG G PGGGG GP
Sbjct: 150 GGGPGGGGGPGGGPGGGGGGGPGGGGGGP 178
Score = 40.8 bits (94), Expect = 0.002
Identities = 17/28 (60%), Positives = 17/28 (60%)
Query: 23 GPRPGPGGGNGGPAGGGHGNPPGGGGSG 50
G GPGGG G GGG G PGGGG G
Sbjct: 142 GAHDGPGGGGGPGGGGGPGGGPGGGGGG 169
Score = 40.4 bits (93), Expect = 0.003
Identities = 25/56 (44%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 23 GPRPGPGGGNGGPAGGGHGNPPGG--GGSG---PKARAALVPRPPAPAGALRESTG 73
GP GPGGG GG GGG G P GG GGS P + PA A A+ +G
Sbjct: 158 GPGGGPGGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSG 213
Score = 34.3 bits (77), Expect = 0.21
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 8/37 (21%)
Query: 23 GPRPGPGGGNGGPAGGG--------HGNPPGGGGSGP 51
G G GG + GP GGG G P GGGG GP
Sbjct: 135 GAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGP 171
Score = 29.6 bits (65), Expect = 5.1
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 30 GGNGGPAGGG--HGNPPGGGGSG 50
GG G AGGG H P GGGG G
Sbjct: 132 GGAGAAAGGGGAHDGPGGGGGPG 154
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 41.6 bits (96), Expect = 0.001
Identities = 21/47 (44%), Positives = 23/47 (48%)
Query: 16 SSEDRLCGPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPP 62
+ E +L GP G GGG GG GGG G GGGG RPP
Sbjct: 441 AEEGQLYGPCGGGGGGGGGGGGGGGGGGGGGGGEAGAVAPYGYTRPP 487
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 41.6 bits (96), Expect = 0.001
Identities = 29/71 (40%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 7 CTEQNLRSRSSED-RLCGPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPA 65
CTE RSS R G G GGG GG GGG G GGGG+G A P
Sbjct: 43 CTEAGRDDRSSPAVRAAG---GGGGGGGGGGGGGGGGGVGGGGAGGGAGGGRSPVRELDM 99
Query: 66 GALRESTGRGT 76
GA S G+
Sbjct: 100 GAAERSREPGS 110
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 40.0 bits (92), Expect = 0.004
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Query: 24 PRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTGMKYRNL 83
P G GGG GG GG GGGSG + A P+PP P G RG G++ +
Sbjct: 161 PPLGEGGGGGGEGGG------AGGGSGEREGGA--PQPPPPRG------WRGKGVRAQQR 206
Query: 84 GKSG 87
G SG
Sbjct: 207 GGSG 210
Score = 30.0 bits (66), Expect = 3.9
Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Query: 9 EQNLRSRSSEDRLCGPRPGPGGG-NGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGA 67
+Q L+ + + G R GP GG G P G+ P A + APA
Sbjct: 72 QQQLQQQQQQGNKTGSRTGPPASIRGGGGGAEKATPLAPKGAAPGAVQPVAGAEAAPAAT 131
Query: 68 LRESTGRGTG 77
L GR G
Sbjct: 132 LAALGGRRPG 141
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 39.7 bits (91), Expect = 0.005
Identities = 21/40 (52%), Positives = 21/40 (52%), Gaps = 12/40 (30%)
Query: 23 GPRPGPGG----GNGGPAGGGHGN--------PPGGGGSG 50
GP PGP G G GGP GGG G PPGGGG G
Sbjct: 29 GPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGPG 68
Score = 37.0 bits (84), Expect = 0.032
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 23 GPRPGP---GGGNGGPAGGGHGNPPGGGGSGPK 52
GP PGP GG GG G G G PPG G+G +
Sbjct: 8 GPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDR 40
Score = 29.6 bits (65), Expect = 5.1
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 10/44 (22%)
Query: 18 EDRLCGPRPGPGG-GNGGPAG---------GGHGNPPGGGGSGP 51
E LC PGPGG G GP G G G PP GG P
Sbjct: 496 EGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPP 539
Score = 28.9 bits (63), Expect = 8.7
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 14 SRSSEDRLCGPRPGPGGGNGGPAGGGHGNPPGGGGSG 50
+R D L R GP G GGP G PPGG G G
Sbjct: 383 ARIINDLLQSLRSGPPGPPGGP-----GMPPGGRGRG 414
Score = 28.9 bits (63), Expect = 8.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 8/31 (25%)
Query: 23 GPRPGPGGGNGGPAGG-------GHGNPPGG 46
GP PGP GG G P GG G+ PPGG
Sbjct: 396 GP-PGPPGGPGMPPGGRGRGRGQGNWGPPGG 425
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 39.3 bits (90), Expect = 0.006
Identities = 26/66 (39%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 23 GPRPGPGGGNGGPAGGG-HGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTGMKYR 81
GP PGP GG GGP G G PP G P P P G +R G G G +R
Sbjct: 649 GPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDG---PGDPMRGGPMRGGPGPGPGPYHR 705
Query: 82 NLGKSG 87
G G
Sbjct: 706 GRGGRG 711
Score = 35.4 bits (80), Expect = 0.093
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 11/56 (19%)
Query: 20 RLCGPRPGPGGGN-----------GGPAGGGHGNPPGGGGSGPKARAALVPRPPAP 64
RL GP P P GG+ GGP GG G PG G R P PP P
Sbjct: 665 RLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPPPP 720
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/26 (61%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 24 PRPGPGGGNGGPAGGGHGNPPGGGGS 49
P GPGGG G AGGGH G GGS
Sbjct: 815 PHEGPGGGMG--AGGGHRPHEGPGGS 838
Score = 30.8 bits (68), Expect = 2.3
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Query: 24 PRPGPGGGNGGPAGGGH--GNPPGGGGSG 50
P GPGG GG GGGH PGGG SG
Sbjct: 783 PHEGPGGSMGG--GGGHRPHEGPGGGISG 809
Score = 30.4 bits (67), Expect = 3.0
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 24 PRPGPGGGNGGPAG-GGHGNPPGGGGSG 50
P GPGGG G +G H P GG GSG
Sbjct: 753 PHEGPGGGMGNSSGHRPHEGPGGGMGSG 780
Score = 30.0 bits (66), Expect = 3.9
Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 23/73 (31%)
Query: 23 GPRPGPG---------GGN-------------GGPAGGGHGNPPGGGGSGPKARAALVPR 60
GP PGPG GGN GG +GGG N GG G G P
Sbjct: 695 GPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPH 754
Query: 61 PPAPAGALRESTG 73
P G + S+G
Sbjct: 755 -EGPGGGMGNSSG 766
Score = 29.3 bits (64), Expect = 6.6
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 24 PRPGPGGG-NGGPAGGGHGNPPGGGGSG 50
P GPGGG +GG H P GG G+G
Sbjct: 799 PHEGPGGGISGGSGHRPHEGPGGGMGAG 826
Score = 28.9 bits (63), Expect = 8.7
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 24 PRPGPGGGNGG---PAGGGHGNPPGGGGSGP 51
P GPGGG G P G G+ GGGG P
Sbjct: 769 PHEGPGGGMGSGHRPHEGPGGSMGGGGGHRP 799
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 26 PGPGGGNGGPAGGGHGNPPGGGGS-----GPKARAALVPRPPAPAGALRESTGRGTGMK 79
PGPGGG G AGGG G GG S G AR + P G + GR +G +
Sbjct: 26 PGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCR 84
Score = 29.3 bits (64), Expect = 6.6
Identities = 27/68 (39%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 26 PGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALR---ESTGRGTGMKYRN 82
PG G GP GGG G GGGG G + R A AGA R + G G + +
Sbjct: 19 PGDGDEAPGP-GGGEGAAAGGGGGGLGSGGRSAQR-RAGAGARRPIGAAPSVGPGGELQG 76
Query: 83 LG-KSGLR 89
G KSG R
Sbjct: 77 WGRKSGCR 84
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 26 PGPGGGNGGPAGGGHGNPPGGGGS-----GPKARAALVPRPPAPAGALRESTGRGTGMK 79
PGPGGG G AGGG G GG S G AR + P G + GR +G +
Sbjct: 26 PGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCR 84
Score = 29.3 bits (64), Expect = 6.6
Identities = 27/68 (39%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 26 PGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALR---ESTGRGTGMKYRN 82
PG G GP GGG G GGGG G + R A AGA R + G G + +
Sbjct: 19 PGDGDEAPGP-GGGEGAAAGGGGGGLGSGGRSAQR-RAGAGARRPIGAAPSVGPGGELQG 76
Query: 83 LG-KSGLR 89
G KSG R
Sbjct: 77 WGRKSGCR 84
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 26 PGPGGGNGGPAGGGHGNPPGGGGS-----GPKARAALVPRPPAPAGALRESTGRGTGMK 79
PGPGGG G AGGG G GG S G AR + P G + GR +G +
Sbjct: 26 PGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCR 84
Score = 29.3 bits (64), Expect = 6.6
Identities = 27/68 (39%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 26 PGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALR---ESTGRGTGMKYRN 82
PG G GP GGG G GGGG G + R A AGA R + G G + +
Sbjct: 19 PGDGDEAPGP-GGGEGAAAGGGGGGLGSGGRSAQR-RAGAGARRPIGAAPSVGPGGELQG 76
Query: 83 LG-KSGLR 89
G KSG R
Sbjct: 77 WGRKSGCR 84
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 38.9 bits (89), Expect = 0.008
Identities = 22/67 (32%), Positives = 25/67 (37%)
Query: 26 PGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTGMKYRNLGK 85
PG GG GG GGG G P G SGP +P A + T +L
Sbjct: 127 PGGAGGGGGGGGGGPGRGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSSSSTSLSS 186
Query: 86 SGLRVSC 92
S R C
Sbjct: 187 SSKRTEC 193
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 38.9 bits (89), Expect = 0.008
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 20 RLCGPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTGMK 79
RLC RPG GGG GG +G GGGG+G +A P P A A + G G +
Sbjct: 13 RLCC-RPGGGGGGGGSSG-------GGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALG 64
Query: 80 YRNLGKS 86
GK+
Sbjct: 65 LLPPGKT 71
Score = 37.4 bits (85), Expect = 0.024
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 26 PGPGGGNGGPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRGTGMKYRNLGK 85
PG G GG AGGG G GG S P A +A A A A + G ++G
Sbjct: 137 PGDDSGGGGGAGGGGG---GGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGA 193
Query: 86 SG 87
+G
Sbjct: 194 AG 195
>gi|50233789 cancer/testis antigen 2 isoform LAGE-1a [Homo
sapiens]
Length = 180
Score = 38.1 bits (87), Expect = 0.014
Identities = 23/52 (44%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 27 GPGGGNG---GPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRG 75
G GG G GP G G + PGG GP A R P AGA R S RG
Sbjct: 7 GTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRG 58
Score = 31.2 bits (69), Expect = 1.7
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 14/57 (24%)
Query: 27 GPGGGNGGP----AGGGHG----------NPPGGGGSGPKARAALVPRPPAPAGALR 69
GPGG GGP A GG G P GG GP AA P GA R
Sbjct: 26 GPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAPRGPHGGAASAQDGRCPCGARR 82
Score = 29.3 bits (64), Expect = 6.6
Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 23 GPRPGPGGG--NGGPAG--GGHGNPPGGGGSGPK---ARAALVPRPPAPAG 66
G GPGG GP G GG G GG GP+ A A PR AP G
Sbjct: 13 GDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAPRG 63
>gi|10337609 cancer/testis antigen 2 isoform LAGE-1b [Homo
sapiens]
Length = 210
Score = 38.1 bits (87), Expect = 0.014
Identities = 23/52 (44%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 27 GPGGGNG---GPAGGGHGNPPGGGGSGPKARAALVPRPPAPAGALRESTGRG 75
G GG G GP G G + PGG GP A R P AGA R S RG
Sbjct: 7 GTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRG 58
Score = 31.2 bits (69), Expect = 1.7
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 14/57 (24%)
Query: 27 GPGGGNGGP----AGGGHG----------NPPGGGGSGPKARAALVPRPPAPAGALR 69
GPGG GGP A GG G P GG GP AA P GA R
Sbjct: 26 GPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAPRGPHGGAASAQDGRCPCGARR 82
Score = 29.3 bits (64), Expect = 6.6
Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 23 GPRPGPGGG--NGGPAG--GGHGNPPGGGGSGPK---ARAALVPRPPAPAG 66
G GPGG GP G GG G GG GP+ A A PR AP G
Sbjct: 13 GDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAPRG 63
>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
[Homo sapiens]
Length = 994
Score = 38.1 bits (87), Expect = 0.014
Identities = 17/28 (60%), Positives = 17/28 (60%)
Query: 23 GPRPGPGGGNGGPAGGGHGNPPGGGGSG 50
GPR GG GGPAGG GN GGG G
Sbjct: 14 GPRSSGGGYGGGPAGGHGGNRGSGGGGG 41
Score = 35.8 bits (81), Expect = 0.071
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 27 GPGGGNGGPAGGGHGNPPGGGGSGPKAR 54
GP GG+GG G G G GGGG G + R
Sbjct: 25 GPAGGHGGNRGSGGGGGGGGGGRGGRGR 52
>gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
[Homo sapiens]
Length = 1008
Score = 38.1 bits (87), Expect = 0.014
Identities = 17/28 (60%), Positives = 17/28 (60%)
Query: 23 GPRPGPGGGNGGPAGGGHGNPPGGGGSG 50
GPR GG GGPAGG GN GGG G
Sbjct: 14 GPRSSGGGYGGGPAGGHGGNRGSGGGGG 41
Score = 35.8 bits (81), Expect = 0.071
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 27 GPGGGNGGPAGGGHGNPPGGGGSGPKAR 54
GP GG+GG G G G GGGG G + R
Sbjct: 25 GPAGGHGGNRGSGGGGGGGGGGRGGRGR 52
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 38.1 bits (87), Expect = 0.014
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 30 GGNGGPAGGGHGNPPGGGGSG 50
GG GGP GGG G P GGGG G
Sbjct: 639 GGGGGPGGGGGGGPGGGGGPG 659
Score = 37.4 bits (85), Expect = 0.024
Identities = 20/39 (51%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 15 RSSEDRLCGPRPGP--GGGNGGPAGGGHGNPPGGGGSGP 51
RS R C G GGG G A GG G P GGGG GP
Sbjct: 614 RSLCTRCCWASKGAAVGGGAGATAAGGGGGPGGGGGGGP 652
Score = 37.4 bits (85), Expect = 0.024
Identities = 17/23 (73%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 27 GPGGGNGGPAGGGHGNPPGGGGS 49
GPGGG GG GGG G P GGGGS
Sbjct: 643 GPGGGGGGGPGGG-GGPGGGGGS 664
Score = 33.1 bits (74), Expect = 0.46
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Query: 26 PGPGGGNGGPAGGGHGNPPG------GGGSGPKARAALVPRPPAPAG 66
P P G P+G GHG PPG GGG G A PPA G
Sbjct: 168 PPPPPGEQPPSGSGHGRPPGARPPHRGGGRGGGGGDAAA--PPARGG 212
Score = 33.1 bits (74), Expect = 0.46
Identities = 20/42 (47%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 14 SRSSEDRLCGPRPGPGGGNGGPAGGGHGNPPG-GGGSGPKAR 54
S S R G RP GG G GG PP GGG G KAR
Sbjct: 178 SGSGHGRPPGARPPHRGGGRGGGGGDAAAPPARGGGGGGKAR 219
>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene
homolog A [Homo sapiens]
Length = 353
Score = 38.1 bits (87), Expect = 0.014
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 17 SEDRLCGPRPGPGGGNGGPAGGGHGNPPGGGGSGP 51
S C P PG GGG G AGGG G+ GG GP
Sbjct: 64 SSPSFCAPSPGTGGG--GGAGGGGGSSQAGGAPGP 96
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,152,789
Number of Sequences: 37866
Number of extensions: 957628
Number of successful extensions: 15817
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 424
Number of HSP's that attempted gapping in prelim test: 8087
Number of HSP's gapped (non-prelim): 5518
length of query: 404
length of database: 18,247,518
effective HSP length: 105
effective length of query: 299
effective length of database: 14,271,588
effective search space: 4267204812
effective search space used: 4267204812
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.