Guide to the Human Genome
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Name: KCNAB2 Sequence: fasta or formatted (353aa) NCBI GI: 27436969
Description:

potassium voltage-gated channel, shaker-related subfamily, beta member 2 isoform 2

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [367aa] potassium voltage-gated channel, shaker-related subfamily, beta m...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         26           2
 C cysteine            1.4          5           1
 D aspartate           2.8         10           1
 E glutamate           7.4         26           2
 F phenylalanine       2.0          7           1
 G glycine             8.8         31           2
 H histidine           1.4          5           1
 I isoleucine          6.8         24           2
 K lysine              5.9         21           3
 L leucine             9.9         35           2
 M methionine          3.7         13           1
 N asparagine          3.4         12           1
 P proline             4.2         15           2
 Q glutamine           4.5         16           2
 R arginine            5.7         20           2
 S serine              8.2         29           3
 T threonine           5.1         18           2
 V valine              5.4         19           2
 W tryptophan          2.3          8           1
 Y tyrosine            3.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, shaker-related subf... 
KCNAB2                0.987   potassium voltage-gated channel, shaker-related subfa...
KCNAB1                0.827   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.823   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.822   potassium voltage-gated channel, shaker-related subf...
KCNAB3                0.725   potassium voltage-gated channel, shaker-related subf...
AKR7A2                0.091   aldo-keto reductase family 7, member A2 
AKR7L                 0.089   aflatoxin B1 aldehyde reductase 3 isoform 1 
AKR7A3                0.085   aldo-keto reductase family 7, member A3 
AKR7L                 0.050   aflatoxin B1 aldehyde reductase 3 isoform 2 
AKR1A1                0.029   aldo-keto reductase family 1, member A1 
AKR1A1                0.029   aldo-keto reductase family 1, member A1 
AKR1B1                0.028   aldo-keto reductase family 1, member B1 
AKR1C2                0.019   aldo-keto reductase family 1, member C2 
AKR1C2                0.019   aldo-keto reductase family 1, member C2 
AKR1CL2               0.015   aldo-keto reductase family 1, member C-like 2 
AKR1C1                0.013   aldo-keto reductase family 1, member C1 
LOC100134257          0.013   hypothetical protein LOC100134257 
AKR1C3                0.013   aldo-keto reductase family 1, member C3 
AKR1C4                0.010   aldo-keto reductase family 1, member C4 
AKR1D1                0.007   aldo-keto reductase family 1, member D1 
IRAK2                 0.006   interleukin-1 receptor-associated kinase 2 
DIP2B                 0.006   DIP2 disco-interacting protein 2 homolog B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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