Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 26787966

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|26787966 general transcription factor IIA, 1-like isoform 2
[Homo sapiens]
         (453 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|26787966 general transcription factor IIA, 1-like isoform 2 [...   899   0.0  
gi|26787968 general transcription factor IIA, 1-like isoform 1 [...   879   0.0  
gi|29553944 STON1-GTF2A1L protein [Homo sapiens]                      869   0.0  
gi|7706735 TFIIA alpha, p55 isoform 1 [Homo sapiens]                   89   8e-18
gi|42476101 TFIIA alpha, p55 isoform 2 [Homo sapiens]                  71   2e-12
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]    47   3e-05
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]    44   3e-04
gi|16445033 ACRC protein [Homo sapiens]                                40   0.006
gi|11545835 TSPY-like 2 [Homo sapiens]                                 39   0.007
gi|60498973 myelin transcription factor 1-like [Homo sapiens]          38   0.022
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]           37   0.037
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]           37   0.037
gi|41872673 NIMA-related kinase 1 [Homo sapiens]                       35   0.11 
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       34   0.24 
gi|115529449 upstream binding transcription factor, RNA polymera...    34   0.24 
gi|115529451 upstream binding transcription factor, RNA polymera...    34   0.24 
gi|7657671 upstream binding transcription factor, RNA polymerase...    34   0.24 
gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens]        34   0.31 
gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens]        34   0.31 
gi|83367077 mucin 16 [Homo sapiens]                                    33   0.41 
gi|186659512 calmodulin regulated spectrin-associated protein 1 ...    33   0.41 
gi|59814411 hypothetical protein LOC253725 [Homo sapiens]              33   0.41 
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo...    33   0.53 
gi|54124343 hypothetical protein LOC387680 [Homo sapiens]              33   0.53 
gi|154090959 hypothetical protein LOC55747 [Homo sapiens]              33   0.53 
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu...    33   0.69 
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre...    33   0.69 
gi|42415492 chromosome 14 open reading frame 106 [Homo sapiens]        33   0.69 
gi|31581524 cordon-bleu homolog [Homo sapiens]                         33   0.69 
gi|210147457 intermediate filament family orphan 2 [Homo sapiens]      33   0.69 

>gi|26787966 general transcription factor IIA, 1-like isoform 2
           [Homo sapiens]
          Length = 453

 Score =  899 bits (2324), Expect = 0.0
 Identities = 453/453 (100%), Positives = 453/453 (100%)

Query: 1   MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNS 60
           MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNS
Sbjct: 1   MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNS 60

Query: 61  IQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVP 120
           IQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVP
Sbjct: 61  IQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVP 120

Query: 121 AGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSL 180
           AGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSL
Sbjct: 121 AGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSL 180

Query: 181 QATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSH 240
           QATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSH
Sbjct: 181 QATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSH 240

Query: 241 YISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILK 300
           YISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILK
Sbjct: 241 YISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILK 300

Query: 301 NRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEE 360
           NRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEE
Sbjct: 301 NRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEE 360

Query: 361 IGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGD 420
           IGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGD
Sbjct: 361 IGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGD 420

Query: 421 DVSEQDVPDLFDTDNVIVCQYDKAFPRRTSFNT 453
           DVSEQDVPDLFDTDNVIVCQYDKAFPRRTSFNT
Sbjct: 421 DVSEQDVPDLFDTDNVIVCQYDKAFPRRTSFNT 453


>gi|26787968 general transcription factor IIA, 1-like isoform 1
           [Homo sapiens]
          Length = 478

 Score =  879 bits (2271), Expect = 0.0
 Identities = 443/443 (100%), Positives = 443/443 (100%)

Query: 1   MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNS 60
           MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNS
Sbjct: 1   MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNS 60

Query: 61  IQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVP 120
           IQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVP
Sbjct: 61  IQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVP 120

Query: 121 AGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSL 180
           AGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSL
Sbjct: 121 AGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSL 180

Query: 181 QATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSH 240
           QATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSH
Sbjct: 181 QATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSH 240

Query: 241 YISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILK 300
           YISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILK
Sbjct: 241 YISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILK 300

Query: 301 NRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEE 360
           NRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEE
Sbjct: 301 NRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEE 360

Query: 361 IGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGD 420
           IGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGD
Sbjct: 361 IGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGD 420

Query: 421 DVSEQDVPDLFDTDNVIVCQYDK 443
           DVSEQDVPDLFDTDNVIVCQYDK
Sbjct: 421 DVSEQDVPDLFDTDNVIVCQYDK 443


>gi|29553944 STON1-GTF2A1L protein [Homo sapiens]
          Length = 1182

 Score =  869 bits (2245), Expect = 0.0
 Identities = 439/442 (99%), Positives = 439/442 (99%)

Query: 2    ACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNSI 61
            AC N  PKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNSI
Sbjct: 706  ACYNIQPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNSI 765

Query: 62   QSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVPA 121
            QSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVPA
Sbjct: 766  QSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVPA 825

Query: 122  GVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSLQ 181
            GVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSLQ
Sbjct: 826  GVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSLQ 885

Query: 182  ATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSHY 241
            ATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSHY
Sbjct: 886  ATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSHY 945

Query: 242  ISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKN 301
            ISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKN
Sbjct: 946  ISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKN 1005

Query: 302  RMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEI 361
            RMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEI
Sbjct: 1006 RMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEI 1065

Query: 362  GSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDD 421
            GSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDD
Sbjct: 1066 GSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDD 1125

Query: 422  VSEQDVPDLFDTDNVIVCQYDK 443
            VSEQDVPDLFDTDNVIVCQYDK
Sbjct: 1126 VSEQDVPDLFDTDNVIVCQYDK 1147


>gi|7706735 TFIIA alpha, p55 isoform 1 [Homo sapiens]
          Length = 376

 Score = 89.0 bits (219), Expect = 8e-18
 Identities = 92/290 (31%), Positives = 130/290 (44%), Gaps = 56/290 (19%)

Query: 5   NPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNSIQSP 64
           N VPKLYRSVIEDVI  VR++F ++G++EQVL +LK LWE K++QS+A  D F +  Q  
Sbjct: 8   NTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV-DGFHSEEQQL 66

Query: 65  LFTLQLPHSLHQ------------------TLQSSTASLVIPAGR--TLPSFTTAE---- 100
           L  +Q  H   Q                    Q+ T  ++IPA +  T P     +    
Sbjct: 67  LLQVQQQHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLI 126

Query: 101 --LGTSNSSANFTFPGYPIHVPAGVT----LQTVSGHLYKVNVPIMVTETSGRAGILQHP 154
             +  SN SA  T     + +PAGVT    + T SG L +V     V   +G   I Q P
Sbjct: 127 QHMNASNMSAAAT--AATLALPAGVTPVQQILTNSGQLLQV-----VRAANGAQYIFQ-P 178

Query: 155 IQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLENAT 214
            Q V  Q       Q  +PQ+ P  +QA       I+ VL   A LP G   +  +    
Sbjct: 179 QQSVVLQ-------QQVIPQMQPGGVQAPV-----IQQVL---APLPGGISPQTGVIIQP 223

Query: 215 SDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVL 264
             IL + GN+ +++P  +     +   I+  G    PQ     +    VL
Sbjct: 224 QQILFT-GNKTQVIPTTVAAPTPAQAQITATGQQ-QPQAQPAQTQAPLVL 271



 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 26/98 (26%)

Query: 346 IIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNED 405
           ++QVDG+GDTSS E+     D D++E             EE+ +    ED          
Sbjct: 270 VLQVDGTGDTSSEEDEDEEEDYDDDE-------------EEDKEKDGAEDGQ-------- 308

Query: 406 PQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDK 443
                VEE+PLNS DDVS+++  +LFDT+NV+VCQYDK
Sbjct: 309 -----VEEEPLNSEDDVSDEEGQELFDTENVVVCQYDK 341


>gi|42476101 TFIIA alpha, p55 isoform 2 [Homo sapiens]
          Length = 337

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 26/98 (26%)

Query: 346 IIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNED 405
           ++QVDG+GDTSS E+     D D++E             EE+ +    ED          
Sbjct: 231 VLQVDGTGDTSSEEDEDEEEDYDDDE-------------EEDKEKDGAEDGQ-------- 269

Query: 406 PQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDK 443
                VEE+PLNS DDVS+++  +LFDT+NV+VCQYDK
Sbjct: 270 -----VEEEPLNSEDDVSDEEGQELFDTENVVVCQYDK 302



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 70/257 (27%), Positives = 102/257 (39%), Gaps = 56/257 (21%)

Query: 38  DLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQ------------------TLQ 79
           +LK LWE K++QS+A  D F +  Q  L  +Q  H   Q                    Q
Sbjct: 2   ELKTLWENKLMQSRAV-DGFHSEEQQLLLQVQQQHQPQQQQHHHHHHHQQAQPQQTVPQQ 60

Query: 80  SSTASLVIPAGR--TLPSFTTAE------LGTSNSSANFTFPGYPIHVPAGVT----LQT 127
           + T  ++IPA +  T P     +      +  SN SA  T     + +PAGVT    + T
Sbjct: 61  AQTQQVLIPASQQATAPQVIVPDSKLIQHMNASNMSAAAT--AATLALPAGVTPVQQILT 118

Query: 128 VSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKS 187
            SG L +V     V   +G   I Q P Q V  Q       Q  +PQ+ P  +QA     
Sbjct: 119 NSGQLLQV-----VRAANGAQYIFQ-PQQSVVLQ-------QQVIPQMQPGGVQAPV--- 162

Query: 188 QRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSHYISLPGV 247
             I+ VL   A LP G   +  +      IL + GN+ +++P  +     +   I+  G 
Sbjct: 163 --IQQVL---APLPGGISPQTGVIIQPQQILFT-GNKTQVIPTTVAAPTPAQAQITATGQ 216

Query: 248 VFSPQVSQTNSNVESVL 264
              PQ     +    VL
Sbjct: 217 Q-QPQAQPAQTQAPLVL 232


>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
          Length = 1301

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 7/188 (3%)

Query: 250 SPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSV 309
           S   + ++++ +S  S ++S + N  D S S+    +   + +D       N     DS 
Sbjct: 782 SSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSS-----NSSDSSDSS 836

Query: 310 KQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADE 369
               + +   +   S+ DS+++ D S      D  +      S D+S + E  ++ D+ +
Sbjct: 837 NSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSD 896

Query: 370 NEFLGNIDGGDLKVPEEEADSISNEDS--ATNSSDNEDPQVNIVEEDPLNSGDDVSEQDV 427
           +    + D  D     + +DS ++ DS  ++NSSDN +   +    D  +S D  +  D 
Sbjct: 897 SSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDS 956

Query: 428 PDLFDTDN 435
            +  D+ N
Sbjct: 957 SNSSDSSN 964



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 17/187 (9%)

Query: 254 SQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPR 313
           S +NS+  S  S S+  + + +    S S   +     +D       N     DS     
Sbjct: 643 SDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSS-----NSSDSSDSSDSSN 697

Query: 314 NIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFL 373
           + E   +   S+ DS+   D S   + D        D S  + S++   S+  +D ++  
Sbjct: 698 SSESSDSSDSSDSDSSDSSDSSNSNSSDS-------DSSNSSDSSDSSNSSDSSDSSDSS 750

Query: 374 GNIDGGDLKVPEEEADSISNEDSA-----TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVP 428
            + D  D       +DS  + DS+     +NSSD+ D   +    D  NS D  +  D  
Sbjct: 751 NSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSS 810

Query: 429 DLFDTDN 435
           D  D+ +
Sbjct: 811 DSSDSSD 817



 Score = 38.9 bits (89), Expect = 0.010
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 2/124 (1%)

Query: 314  NIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFL 373
            N  + S+   S   S+S        + D        D S  + S++   S+  +D +E  
Sbjct: 1092 NSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESS 1151

Query: 374  GNIDGGDLKVPEEEADSISNEDSA--TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLF 431
             + D  D     + +DS  + DS+  +NSSD+ D   +    D  +S D     D  D  
Sbjct: 1152 DSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1211

Query: 432  DTDN 435
            D+ +
Sbjct: 1212 DSSD 1215



 Score = 38.1 bits (87), Expect = 0.017
 Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 16/182 (8%)

Query: 254 SQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPR 313
           S ++S  +S  S S+  + N      S S + +     +D             DS     
Sbjct: 634 SDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSD-----------SSDSSSSSD 682

Query: 314 NIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFL 373
           +     +   S+  ++S+   S   +D D  +    D S   SS+ +  S+  +D ++  
Sbjct: 683 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSD--SSDSSNSNSSDSD--SSNSSDSSDSS 738

Query: 374 GNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDT 433
            + D  D       +DS  + DS+ NSSD+ D   +    D  NS D     +  D  D+
Sbjct: 739 NSSDSSDSSDSSNSSDSSDSSDSS-NSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDS 797

Query: 434 DN 435
            N
Sbjct: 798 SN 799



 Score = 38.1 bits (87), Expect = 0.017
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 2/117 (1%)

Query: 319 SNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDG 378
           SN   +  DS+   + S   + D        D S  + S+E   S+ +++ ++   + D 
Sbjct: 885 SNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDS 944

Query: 379 GDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
            D       +DS ++ DS +NSSD+ D   +    D  NS D     D  D  D+ +
Sbjct: 945 SDSSDSSNSSDSSNSSDS-SNSSDSSDSN-SSDSSDSSNSSDSSDSSDSSDSSDSSD 999



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 324  SEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDA-DENEFLGNIDGGDLK 382
            +  DS++  D S      D  +      S D+S++ +   + D+ D ++   + D  D  
Sbjct: 1023 NSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSS 1082

Query: 383  VPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
               + +DS SN   +++SSD+ D   +    D  +S D  +  D  D  D+ +
Sbjct: 1083 ESSDSSDS-SNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSD 1134



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 6/115 (5%)

Query: 327  DSNSQVDLSIRVTDDDIGEIIQVDGSGDTS-SNEEIGSTRDADENEFLGNIDGGDLKVPE 385
            DS+   D S      D  +      S D+S S++   S+  +D ++   + D  D     
Sbjct: 1044 DSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSS 1103

Query: 386  EEADSISNEDSA-----TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
            + +DS  + DS+     +NSSD+ D   +    D  NS D     +  D  D+ +
Sbjct: 1104 DSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSD 1158



 Score = 37.4 bits (85), Expect = 0.028
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 327  DSNSQVDLSIRVTDDDIGEIIQV-DGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPE 385
            DS+   D S      D  E     D S  + S++   S+  +D ++   + D  D     
Sbjct: 1065 DSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSS 1124

Query: 386  EEADSISNEDSA--TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
            + +DS  + DS+  +NSSD+ D   +    D  +S D     D  D  D+ +
Sbjct: 1125 DSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSD 1176



 Score = 37.0 bits (84), Expect = 0.037
 Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 2/114 (1%)

Query: 324  SEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKV 383
            +  DS+   D S      +  +      S D++S++   S+  +D ++   + D  D   
Sbjct: 940  NSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSD 999

Query: 384  PEEEADSISNEDS--ATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
                +DS  + DS  ++NSSD+ +   +    D  +S D     D  D  D+ +
Sbjct: 1000 SSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSD 1053



 Score = 37.0 bits (84), Expect = 0.037
 Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 8/188 (4%)

Query: 250  SPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSV 309
            S   S ++ +  S  S ++S + N  D S S S   +   + +D       +        
Sbjct: 941  SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDS 1000

Query: 310  KQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADE 369
                +  + S+   S   S+S        + D        D S  + S++   S+  +D 
Sbjct: 1001 SNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDS 1060

Query: 370  NEFLGNIDGGDLKVPEEEADSISNEDSA--TNSSDNEDPQVNIVEEDPLNSGDDVSEQDV 427
            ++   + D  D     + +DS  + DS+  +NSSD+ D        D  +S D     D 
Sbjct: 1061 SDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSD------SSDSSDSSDSSDSSDS 1114

Query: 428  PDLFDTDN 435
             D  D+ N
Sbjct: 1115 SDSSDSSN 1122



 Score = 37.0 bits (84), Expect = 0.037
 Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 314  NIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFL 373
            N  + SN   S   S+S        + D        D S  + S++   S+  +D ++  
Sbjct: 1023 NSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSS 1082

Query: 374  GNIDGGDLKVPEEEADSISNEDSA--TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLF 431
             + D  D     + +DS  + DS+  ++SSD+ D        D  NS D     D  D  
Sbjct: 1083 ESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSD------SSDSSNSSDSSDSSDSSDSS 1136

Query: 432  DTDN 435
            D+ N
Sbjct: 1137 DSSN 1140



 Score = 36.6 bits (83), Expect = 0.048
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 307 DSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRD 366
           DS     + +   +      DSNS  D     +D D  +    D S  ++S++   S+  
Sbjct: 553 DSSDSSNSSDSSDSSDSDSSDSNSSSDSDS--SDSDSSDSSDSDSSDSSNSSDSSDSSDS 610

Query: 367 ADENEFLGNIDG--GDLKVPEEEADSISNEDSA-TNSSDNEDPQVNIVEEDPLNSGDDVS 423
           +D ++   + D      K   + +DS S  DS+ +NSSD+ D   +    +  NS D   
Sbjct: 611 SDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSD 670

Query: 424 EQDVPD 429
             D  D
Sbjct: 671 SSDSSD 676



 Score = 36.6 bits (83), Expect = 0.048
 Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 12/196 (6%)

Query: 250 SPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSV 309
           S   S ++ + +S  S S+S + N  D S S+    +     +D       +     DS 
Sbjct: 662 SSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSES--SDSSDSSDSDSSDSSDSS 719

Query: 310 KQPRNIEEPSNIPVSEKDSNSQ--VDLSIRVTDDDIGEIIQVDGSGDTS----SNEEIGS 363
               +  + SN   S   SNS    D S      D  +      S D+S    S++   S
Sbjct: 720 NSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDS 779

Query: 364 TRDADENEFLGNIDGGDLKVPEEEA---DSISNEDSATNSSDNEDPQVNIVE-EDPLNSG 419
           +  +D N+   + D  D     + +   DS  + DS+ + S N     N  +  D  NS 
Sbjct: 780 SNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSS 839

Query: 420 DDVSEQDVPDLFDTDN 435
           D     D  D  D+D+
Sbjct: 840 DSSDSSDSSDGSDSDS 855



 Score = 36.6 bits (83), Expect = 0.048
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 1/122 (0%)

Query: 314  NIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFL 373
            N  + S+   S   S+S        + D        D S  + S++   S+  +D ++  
Sbjct: 1140 NSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSS 1199

Query: 374  GNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDT 433
             + D  D     + +DS  + DS ++SSD+ D   +    D  +S D  +  D  D  D+
Sbjct: 1200 DSSDSSDSSDSSDSSDSSDSSDS-SDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDS 1258

Query: 434  DN 435
             +
Sbjct: 1259 SD 1260



 Score = 36.2 bits (82), Expect = 0.063
 Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 3/189 (1%)

Query: 250  SPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSV 309
            S   + ++S+  S  S S+  + +      S S   +   + +D       N     DS 
Sbjct: 859  SDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSS 918

Query: 310  KQPRNIEEPSNIPVSEK-DSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDAD 368
                + E  ++   S   DS++  D S      +  +      S ++S + +  S+  +D
Sbjct: 919  NSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSD 978

Query: 369  ENEFLGNIDGGDLKVPEEEADSISNEDS--ATNSSDNEDPQVNIVEEDPLNSGDDVSEQD 426
             +    + D  D     + +DS ++ DS  +++SSD+ +   +    D  NS D     D
Sbjct: 979  SSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSD 1038

Query: 427  VPDLFDTDN 435
              D  D+ +
Sbjct: 1039 SSDSSDSSD 1047



 Score = 36.2 bits (82), Expect = 0.063
 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 5/117 (4%)

Query: 324  SEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKV 383
            S + S+S    +   + D        D S  + S++   S+  +D ++   + D  D   
Sbjct: 1081 SSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSN 1140

Query: 384  PEEEADSISNEDSA-----TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
              + +DS  + DS+     ++SSD+ D   +    D  NS D     D  D  D+ +
Sbjct: 1141 SSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSD 1197



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 13/136 (9%)

Query: 307 DSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRD 366
           DS     N    S+   S+   +S  D S      D  +      S D+S + +   + D
Sbjct: 568 DSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSD------SSDSSDSSDSSDSSD 621

Query: 367 ADENEFLGNIDGGDLKVPEEEADSISNEDS-------ATNSSDNEDPQVNIVEEDPLNSG 419
           +  +      D  D     + +DS S++ S       ++NSS++ D   +    D  +S 
Sbjct: 622 SKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSS 681

Query: 420 DDVSEQDVPDLFDTDN 435
           D  +  D  D  D+ N
Sbjct: 682 DSSNSSDSSDSSDSSN 697



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 5/182 (2%)

Query: 254 SQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPR 313
           S  +S+ +S  S ++S + +  D S S+    +     +D +    K+     DS  +  
Sbjct: 587 SSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDS-----SDSKSDSSKSESDSSDSDSKSD 641

Query: 314 NIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFL 373
           + +  S+      DS+   + S      D  +      S D+S++ +   + D+  +   
Sbjct: 642 SSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSES 701

Query: 374 GNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDT 433
            +          + +DS ++  S ++SS++ D   +    D  +S D  +  D  D  D+
Sbjct: 702 SDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS 761

Query: 434 DN 435
            N
Sbjct: 762 SN 763



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 3/112 (2%)

Query: 327  DSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDA-DENEFLGNIDGGDLKVPE 385
            DS+   D S      D  +      S D+S + +   + D+ D ++   + D  D     
Sbjct: 1155 DSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1214

Query: 386  EEADSISNEDSATNSSDNE--DPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
            + +DS  + DS+ +S  NE  D   +    D  NS D     D  D     N
Sbjct: 1215 DSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSN 1266



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 4/114 (3%)

Query: 324  SEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKV 383
            +  DS+   D S      D  +    D S  + S++   S+  +D ++   + D  D   
Sbjct: 1056 NSSDSSDSSDSSDSSDSSDSSD--SSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSD 1113

Query: 384  PEEEADSISNEDSA--TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
              + +DS ++ DS+  ++SSD+ D   +    D   S D     D  D  D+ +
Sbjct: 1114 SSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSD 1167



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 6/115 (5%)

Query: 327  DSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDA-DENEFLGNIDGGDLKVPE 385
            DS+   D S      D  E      S D+S + +   + D+ D ++   + D  D     
Sbjct: 1131 DSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1190

Query: 386  EEADSISNEDSA-----TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
            + +DS  + DS+     ++SSD+ D   +    D  +S D     D  D  D+ +
Sbjct: 1191 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSD 1245



 Score = 34.7 bits (78), Expect = 0.18
 Identities = 23/110 (20%), Positives = 43/110 (39%)

Query: 326 KDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPE 385
           K  +S  D S      D  +    D S   SS++   S  D+ ++    + D  +     
Sbjct: 546 KSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSS 605

Query: 386 EEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
           + +DS  + DS+ +S    D   +  +    +S  D S+ +  D  D  +
Sbjct: 606 DSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSD 655



 Score = 34.7 bits (78), Expect = 0.18
 Identities = 23/112 (20%), Positives = 44/112 (39%)

Query: 324 SEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKV 383
           S+ DS+   + S      D         S   SS+ +   + D+D ++   + D  D   
Sbjct: 550 SDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSD 609

Query: 384 PEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
             + +DS  + DS ++SS +E    +   +   +  +     D  D  D+ N
Sbjct: 610 SSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSN 661



 Score = 34.7 bits (78), Expect = 0.18
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 2/110 (1%)

Query: 327  DSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDA-DENEFLGNIDGGDLKVPE 385
            DS++  D S      D  +      S D+S + +   + D+ D ++   + D  D     
Sbjct: 1119 DSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1178

Query: 386  EEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
              +DS  + DS+ +SSD+ D   +    D  +S D     D  D  D+ +
Sbjct: 1179 NSSDSSDSSDSS-DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1227



 Score = 34.7 bits (78), Expect = 0.18
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 327  DSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEE 386
            DS+   D S      D  +  +   S D+S + +   + D+ ++      D  D     +
Sbjct: 1128 DSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSS-----DSSDSSNSSD 1182

Query: 387  EADSISNEDSA--TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTD 434
             +DS  + DS+  ++SSD+ D   +    D  +S D     D  D  D++
Sbjct: 1183 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSN 1232



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 350 DGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADS-ISNEDSATNSSDNEDPQV 408
           D S  + SN+   S+  +D +    + +  D     + +DS  SN   ++NSSD+ D   
Sbjct: 778 DSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSN 837

Query: 409 NIVEEDPLNSGDDVSEQDVPDLFDTDN 435
           +    D  +S D  S+ D  +  D+ N
Sbjct: 838 SSDSSDSSDSSDG-SDSDSSNRSDSSN 863



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 1/101 (0%)

Query: 327  DSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDA-DENEFLGNIDGGDLKVPE 385
            DS+   D S      D  +      S D+S + +   + D+ D NE   + D  D     
Sbjct: 1188 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSS 1247

Query: 386  EEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQD 426
              +DS  + DS+ ++SD+ D   +  +    N+    S+ D
Sbjct: 1248 NSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSD 1288



 Score = 33.9 bits (76), Expect = 0.31
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 324 SEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKV 383
           +  DSN   + S      +  +      S D+S + +  S+  +D +    + D  +   
Sbjct: 781 NSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSD 840

Query: 384 PEEEADSI-------SNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
             + +DS        SN   ++NSSD+ D   +    D  +S D     +  D  D+ N
Sbjct: 841 SSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSN 899



 Score = 33.5 bits (75), Expect = 0.41
 Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 2/110 (1%)

Query: 327  DSNSQVDLSIRVTDDDIGEIIQVDGSGDTS-SNEEIGSTRDADENEFLGNIDGGDLKVPE 385
            DS++  D S      D  +      S D+S S++   S+  +D ++   + D  D     
Sbjct: 1053 DSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSS 1112

Query: 386  EEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
            + +DS S+  ++++SSD+ D   +    +  +S D     D  D  D+ +
Sbjct: 1113 DSSDS-SDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSD 1161



 Score = 33.1 bits (74), Expect = 0.53
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 14/80 (17%)

Query: 341 DDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNS 400
           D+ G   + + +G+T  N + G   DA  NE        D+ V +E+   ++    + NS
Sbjct: 144 DNAGATNRSNTNGNTDKNTQNGDVGDAGHNE--------DVAVVQEDGPQVA---GSNNS 192

Query: 401 SDNEDPQVNIVEEDPLNSGD 420
           +DNED    I+E    N G+
Sbjct: 193 TDNED---EIIENSCRNEGN 209



 Score = 33.1 bits (74), Expect = 0.53
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 8/112 (7%)

Query: 327 DSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGG---DLKV 383
           DS+   D S      D  +      S D+S++ +  ++ D+ ++    + D     D   
Sbjct: 769 DSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSN 828

Query: 384 PEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
             + +DS ++ DS ++SSD+ D      + D  N  D  +  D  D  D+ N
Sbjct: 829 SSDSSDSSNSSDS-SDSSDSSDGS----DSDSSNRSDSSNSSDSSDSSDSSN 875



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 4/172 (2%)

Query: 267 SASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEK 326
           ++S   N +D++ S S + +  +          K+   G DS K   + +  S    +  
Sbjct: 466 NSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDS-KGAEDDDSDSTSDTNNS 524

Query: 327 DSNSQVDLSIRVTD-DDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPE 385
           DSN   +      D  D G+        D+S +     + D+ +++   +    D    +
Sbjct: 525 DSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSD 584

Query: 386 EEADSISNEDSA--TNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
            ++   S+ DS+  +NSSD+ D   +    D  +S D  S+    +   +D+
Sbjct: 585 SDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDS 636



 Score = 29.3 bits (64), Expect = 7.7
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 348 QVDGSGDTSSNE----EIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDN 403
           QV GS +++ NE    E     + + +E    I+       E E    + ED+  ++SD 
Sbjct: 185 QVAGSNNSTDNEDEIIENSCRNEGNTSEITPQINSKRNGTKEAEVTPGTGEDAGLDNSDG 244

Query: 404 EDPQVNIVEEDPLNSGDDVSEQ 425
                   E++   SGDD  E+
Sbjct: 245 SPSGNGADEDEDEGSGDDEDEE 266



 Score = 29.3 bits (64), Expect = 7.7
 Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 327  DSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDA-DENEFLGNIDGGDLKVPE 385
            DS+   D S      D  +      S D+S + +   + D+ D ++   + D  D     
Sbjct: 1167 DSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1226

Query: 386  EEADSISNEDSA--TNSSDNEDPQVNIVEEDPLNSGDDVSEQ 425
            + +DS  + DS+  ++SSD+ +   +    D  +S  D +++
Sbjct: 1227 DSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDE 1268


>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
          Length = 1460

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 66/285 (23%), Positives = 112/285 (39%), Gaps = 32/285 (11%)

Query: 154 PIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLENA 213
           P+Q+  Q +  PS + +S  ++ P ++Q  T+  Q ++   + P  +P+ P   +   + 
Sbjct: 369 PVQRTRQLVTSPSPMSSSDGKVLPLNVQVVTQHMQSVKQAPKTPQNVPASPGGDRSARHR 428

Query: 214 TSDILVSPGNEHKIV---PEALLCHQE--------SSHYISLPGVVFSPQVSQTNSNVES 262
              IL  P N   +    P  +L            +SH  SL  VV    +S T SN  +
Sbjct: 429 YPQILPKPANTSALTIRSPTTVLFTSSPIKTAVVPASHMSSL-NVVKMTTISLTPSNSNT 487

Query: 263 VLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSN-- 320
            L  SAS++        S S     +  V  +Q    ++   G  S  + +   E S+  
Sbjct: 488 PLKHSASVSSATGTTEESRSVPQIKNGSVVSLQSPGSRSSSAGGTSAVEVKVEPETSSDE 547

Query: 321 IPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNE---EIGSTRDADE-------- 369
            PV +   NS    + +     +G+    DG+    SNE   EI +T+  D+        
Sbjct: 548 HPV-QCQENSDEAKAPQTPSALLGQKSNTDGALQKPSNEGVIEIKATKVCDQRTKCKSRC 606

Query: 370 NEFLGNIDGGD------LKVPEEEADSISNEDSATNSSDNEDPQV 408
           NE L     G+      L V  +     S+       S N+DP++
Sbjct: 607 NEMLPGTSTGNNQSTITLSVASQNLTFTSSSSPPNGDSINKDPKL 651


>gi|16445033 ACRC protein [Homo sapiens]
          Length = 691

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 8/122 (6%)

Query: 315 IEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTS-----SNEEIGSTRDADE 369
           I+EP  I +S+ D++      + V DD+  +    D + D S     ++++  +  D  +
Sbjct: 116 IQEPP-IVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSD 174

Query: 370 NEFLGNIDGGDLKVPEEEADSISNEDSATNSSDN-EDPQVNIVEEDPLNSGDDVSE-QDV 427
           +    + +  D  VP++ +D  S+++S  +S DN +D  V   + D  +  DD S+  DV
Sbjct: 175 DSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDV 234

Query: 428 PD 429
           PD
Sbjct: 235 PD 236



 Score = 33.9 bits (76), Expect = 0.31
 Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 13/133 (9%)

Query: 307 DSVKQPRNIEEPSNIPVSEKDSNSQVDLSI---RVTDDDIGEIIQVDGSGDTS-----SN 358
           D    P +  + S++P    D +   D S       DD   +    D S D S     S+
Sbjct: 220 DDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSS 279

Query: 359 EEIGSTRDADENEFLGNIDGGDLKVPEEEADSIS-----NEDSATNSSDNEDPQVNIVEE 413
           ++  ++ D+ ++    +    D + P++++D        ++DS     +++D +V +  E
Sbjct: 280 DDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEVPVPAE 339

Query: 414 DPLNSGDDVSEQD 426
           D  N G   S+++
Sbjct: 340 DLCNEGQIASDEE 352



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 307 DSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRD 366
           D  + P +  + S  P    D +   D      D+     +  D S D+S +    S+ D
Sbjct: 154 DDSEAPDDNSDDSEAPDDNSDDSEAPD------DNSDDSDVPDDNSDDSSDDNSDDSSDD 207

Query: 367 ADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQD 426
             ++  + +    D  VP++ +D     D +++ S+  D   +   E P +S DD    D
Sbjct: 208 NSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSD-DSEAPDDSSDDSEAPD 266



 Score = 31.6 bits (70), Expect = 1.5
 Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 12/134 (8%)

Query: 307 DSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTS-----SNEEI 361
           D  + P +  + S++P    D +S  D S   +DD+  +    D   D S     S+++ 
Sbjct: 174 DDSEAPDDNSDDSDVPDDNSDDSSD-DNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDS 232

Query: 362 GSTRDADENEFLGNIDGGDLKVPEE-----EADSISNEDSATNSSDNEDPQVNIVEEDPL 416
               D+ ++    +    D + P++     EA   S++DS      ++D + +    D  
Sbjct: 233 DVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDS 292

Query: 417 NSGDDVS-EQDVPD 429
            + DD S + + PD
Sbjct: 293 EASDDSSDDSEAPD 306



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 346 IIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNED 405
           +I  D + D + N+      ++D++E   + +  D + P++ +D     D   NS D+E 
Sbjct: 122 VISDDDNDDDNGNDLEVPDDNSDDSEAPDD-NSDDSEAPDDNSDDSEAPDD--NSDDSEA 178

Query: 406 PQVNIVEEDPLNSGDDVSEQDVPDLFDTDN 435
           P  N  + D  +   D S  D  D    DN
Sbjct: 179 PDDNSDDSDVPDDNSDDSSDDNSDDSSDDN 208


>gi|11545835 TSPY-like 2 [Homo sapiens]
          Length = 693

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 13/176 (7%)

Query: 260 VESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPS 319
           VE + S  + + + +HD  +S       +   TD ++  +   +  CDS + P + E P+
Sbjct: 433 VEDIFSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENI--CDS-ENPDHNEVPN 489

Query: 320 NIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDAD--ENEFLGNID 377
           N      +S    + +      D       D + +T  NEE  +  +     N F G   
Sbjct: 490 NETTDNNESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYGNNFFKGGFW 549

Query: 378 GG-----DLKVPEEEADSISN-EDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDV 427
           G      D    + EAD  S+ ED+  N  DNE    +  E D  N G D  ++D+
Sbjct: 550 GSHGNNQDSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGD--NEGSDDDDRDI 603


>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
          Length = 1184

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 6/124 (4%)

Query: 303 MYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIG 362
           +YGC   K+ +  ++    P  ++        +++     + E    DG+ D    EE  
Sbjct: 52  VYGCPLAKKRKTQDKQPQEPAPKRKP-----FAVKADSSSVDECDDSDGTEDMDEKEEDE 106

Query: 363 STRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDV 422
               +++N+  G+ D  D +   EE + I  ED   +  D ED +    EE+     ++ 
Sbjct: 107 GEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDE-DDDEDGEDVEDEEEEEEEEEEEEEE 165

Query: 423 SEQD 426
            E +
Sbjct: 166 EENE 169


>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
          Length = 709

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 23/98 (23%), Positives = 41/98 (41%)

Query: 324 SEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKV 383
           S + S  +V+     +D + G     D  G+ + NEE G   D +E+E +      D +V
Sbjct: 166 SSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEV 225

Query: 384 PEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDD 421
            E+  +    E+      + E+ +    E D    G+D
Sbjct: 226 DEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND 263


>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
          Length = 727

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 23/98 (23%), Positives = 41/98 (41%)

Query: 324 SEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKV 383
           S + S  +V+     +D + G     D  G+ + NEE G   D +E+E +      D +V
Sbjct: 166 SSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEV 225

Query: 384 PEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDD 421
            E+  +    E+      + E+ +    E D    G+D
Sbjct: 226 DEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND 263


>gi|41872673 NIMA-related kinase 1 [Homo sapiens]
          Length = 1258

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 62/305 (20%), Positives = 118/305 (38%), Gaps = 39/305 (12%)

Query: 155  IQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAIL-------PSGPVDR 207
            +Q +  ++   +++ + V   +P   +A+ + S ++E  L++P  L       PSG    
Sbjct: 853  VQCISHEINPSAIVDSPVETKSPEFSEASPQMSLKLEGNLEEPDDLETEILQEPSGTNKD 912

Query: 208  KHLENATSDILVSPGNEHKIVPEA-LLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSG 266
            + L    +D+ +S   E K    A  +  QE+   +S  GV  S  V Q +     +  G
Sbjct: 913  ESLPCTITDVWISEEKETKETQSADRITIQENE--VSEDGV--SSTVDQLSDI--HIEPG 966

Query: 267  SASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEK 326
            +     +  D   S  P    H+ V    L+++        S ++       S++P   K
Sbjct: 967  TNDSQHSKCDVDKSVQPEPFFHKVVHSEHLNLVPQVQSVQCSPEESFAFRSHSHLPPKNK 1026

Query: 327  DSNSQ-VDLSIRVTDDDIGEIIQVDGSGDTSSN-------EEIGSTRD--------ADEN 370
            + NS  + LS  + D +  ++++     D S           +G  R          DEN
Sbjct: 1027 NKNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFRTLMDVPTVGDVRQDNLEIDEIEDEN 1086

Query: 371  EFLGNIDGGDLKVPEEEAD---------SISNEDSATNSSDNEDPQVNIVEEDPLNSGDD 421
               G  D  D+   E + D          +  E      S+ E+  +   + +P  +G D
Sbjct: 1087 IKEGPSDSEDIVFEETDTDLQELQASMEQLLREQPGEEYSEEEESVLKNSDVEPTANGTD 1146

Query: 422  VSEQD 426
            V+++D
Sbjct: 1147 VADED 1151


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 27/144 (18%)

Query: 329  NSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEA 388
            NS + +S R  +D+  E + +D   +  SN    ST  A+  + +  +D  D +   +E 
Sbjct: 2364 NSTIIVS-RSGEDESQEDVLMD---EAPSNLSQASTLQANREDSMNILDPEDEEEHTQEE 2419

Query: 389  DSISNEDSATNSSDNEDPQVNIVEED---------PLNSGDDVSE----QDVPDL----- 430
            DS  + +   +S D E+ +    E+D           +  DD SE    +D PD+     
Sbjct: 2420 DSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDDGSEMELDEDYPDMNASPL 2479

Query: 431  -----FDTDNVIVCQYDKAFPRRT 449
                 FD ++ ++ ++D  F   T
Sbjct: 2480 VRFERFDREDDLIIEFDNMFSSAT 2503


>gi|115529449 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 277 ESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSI 336
           +SLS     A  +++++ +  + K R  G +       ++  S     +++     D   
Sbjct: 598 KSLSPQDRAAYKEYISNKRKSMTKLR--GPNPKSSRTTLQSKSESEEDDEEDEDDEDEDE 655

Query: 337 RVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPE-EEADSISNED 395
              DD+ G+  +  G    SS+E+   + D DENE     +  D    E E+ +S  +  
Sbjct: 656 EEEDDENGDSSEDGGDSSESSSED--ESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSS 713

Query: 396 SATNSSDNEDPQVN 409
           S+++S D+ D   N
Sbjct: 714 SSSSSGDSSDSDSN 727



 Score = 32.7 bits (73), Expect = 0.69
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 354 DTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEE 413
           D   +EE     + D +E     DGGD      E +S   +++  +  D +D + +  +E
Sbjct: 650 DEDEDEEEEDDENGDSSE-----DGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDE 704

Query: 414 DPLNSGDDVSEQDVPDLFDTDN 435
           D  + G   S     D  D+D+
Sbjct: 705 DNESEGSSSSSSSSGDSSDSDS 726


>gi|115529451 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 277 ESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSI 336
           +SLS     A  +++++ +  + K R  G +       ++  S     +++     D   
Sbjct: 598 KSLSPQDRAAYKEYISNKRKSMTKLR--GPNPKSSRTTLQSKSESEEDDEEDEDDEDEDE 655

Query: 337 RVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPE-EEADSISNED 395
              DD+ G+  +  G    SS+E+   + D DENE     +  D    E E+ +S  +  
Sbjct: 656 EEEDDENGDSSEDGGDSSESSSED--ESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSS 713

Query: 396 SATNSSDNEDPQVN 409
           S+++S D+ D   N
Sbjct: 714 SSSSSGDSSDSDSN 727



 Score = 32.7 bits (73), Expect = 0.69
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 354 DTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEE 413
           D   +EE     + D +E     DGGD      E +S   +++  +  D +D + +  +E
Sbjct: 650 DEDEDEEEEDDENGDSSE-----DGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDE 704

Query: 414 DPLNSGDDVSEQDVPDLFDTDN 435
           D  + G   S     D  D+D+
Sbjct: 705 DNESEGSSSSSSSSGDSSDSDS 726


>gi|7657671 upstream binding transcription factor, RNA polymerase I
           isoform a [Homo sapiens]
          Length = 764

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 277 ESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSI 336
           +SLS     A  +++++ +  + K R  G +       ++  S     +++     D   
Sbjct: 635 KSLSPQDRAAYKEYISNKRKSMTKLR--GPNPKSSRTTLQSKSESEEDDEEDEDDEDEDE 692

Query: 337 RVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPE-EEADSISNED 395
              DD+ G+  +  G    SS+E+   + D DENE     +  D    E E+ +S  +  
Sbjct: 693 EEEDDENGDSSEDGGDSSESSSED--ESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSS 750

Query: 396 SATNSSDNEDPQVN 409
           S+++S D+ D   N
Sbjct: 751 SSSSSGDSSDSDSN 764



 Score = 32.7 bits (73), Expect = 0.69
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 354 DTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEE 413
           D   +EE     + D +E     DGGD      E +S   +++  +  D +D + +  +E
Sbjct: 687 DEDEDEEEEDDENGDSSE-----DGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDE 741

Query: 414 DPLNSGDDVSEQDVPDLFDTDN 435
           D  + G   S     D  D+D+
Sbjct: 742 DNESEGSSSSSSSSGDSSDSDS 763


>gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens]
          Length = 403

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 6/109 (5%)

Query: 39  LKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVI--PAGRTLPSF 96
           +K++ ET   Q +   D   NS +  +    +P ++   ++   A ++   P G T+P  
Sbjct: 124 IKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYH 183

Query: 97  TTAELGTSNSSAN--FTFPG-YPIHVPAGVT-LQTVSGHLYKVNVPIMV 141
            +  LGT   SAN  F+  G Y    PA VT LQ +S H      P +V
Sbjct: 184 PSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVV 232


>gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens]
          Length = 403

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 6/109 (5%)

Query: 39  LKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVI--PAGRTLPSF 96
           +K++ ET   Q +   D   NS +  +    +P ++   ++   A ++   P G T+P  
Sbjct: 124 IKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYH 183

Query: 97  TTAELGTSNSSAN--FTFPG-YPIHVPAGVT-LQTVSGHLYKVNVPIMV 141
            +  LGT   SAN  F+  G Y    PA VT LQ +S H      P +V
Sbjct: 184 PSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVV 232


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 50/225 (22%), Positives = 83/225 (36%), Gaps = 37/225 (16%)

Query: 83    ASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVPAGVT---------LQTVSGHLY 133
             A  +    +T P+F  +EL T +S+A          +P  ++         L T+SG   
Sbjct: 10604 AETIPTVSKTTPNFFHSELDTVSSTATSHGADVSSAIPTNISPSELDALTPLVTISGTDT 10663

Query: 134   KVNVPIMVT---ETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTE--KSQ 188
                 P +     ET  R   L HP +         S I  ++P  +     AT     S 
Sbjct: 10664 STTFPTLTKSPHETETRTTWLTHPAET-------SSTIPRTIPNFSHHESDATPSIATSP 10716

Query: 189   RIETVLQQPAILPSGPVDRKHLENATSD----------ILVSPGNEHKIVPEALLCHQES 238
               ET    P +  S   +       TS           + +SPG    I   +L+ H E+
Sbjct: 10717 GAETSSAIPIMTVSPGAEDLVTSQVTSSGTDRNMTIPTLTLSPGEPKTIA--SLVTHPEA 10774

Query: 239   SHYISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSP 283
                 ++P    SP VS+  +++ + L+   S      + +L+ SP
Sbjct: 10775 QTSSAIPTSTISPAVSRLVTSMVTSLAAKTSTT----NRALTNSP 10815



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 59/338 (17%), Positives = 116/338 (34%), Gaps = 52/338 (15%)

Query: 63   SPLFTLQLPHSLHQTLQSSTASLV------IPAGRTLPSFTTAELGTSNSSANFTFPGYP 116
            SP+ T  + H+  + + SS   L       +  G+   +       T+ +++N   P   
Sbjct: 7133 SPVTTTDMLHTSPELVTSSPPKLSHTSDERLTTGKDTTNTEAVHPSTNTAASNVEIPSSG 7192

Query: 117  IHVPAGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLN 176
               P+     + +    K   P+ +T T     +       +     Q   I +  P+L 
Sbjct: 7193 HESPSSALADSETS---KATSPMFITSTQEDTTVAISTPHFLETSRIQKESISSLSPKLR 7249

Query: 177  PWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQ 236
                   T  +     VL + +I  +  + R  +  ++S   +S   E  ++PE      
Sbjct: 7250 ETGSSVETSSAIETSAVLSEVSIGATTEISRTEV-TSSSRTSISGSAESTMLPEI----S 7304

Query: 237  ESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTS---PHGALHQHVTD 293
             +   I  P      + S+     ++   GS S +    D S + S    H  + Q +  
Sbjct: 7305 TTRKIIKFPTSPILAESSEMTIKTQTSPPGSTSESTFTLDTSTTPSLVITHSTMTQRLPH 7364

Query: 294  IQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDS-NSQVDLSIRVTDDDIG-------- 344
             ++  L +R  G        ++  PS++PV E    +SQ+ LS  ++   +         
Sbjct: 7365 SEITTLVSRGAG--------DVPRPSSLPVEETSPPSSQLSLSAMISPSPVSSTLPASSH 7416

Query: 345  ------------------EIIQVDGSGDTSSNEEIGST 364
                              E++      +TSS   + ST
Sbjct: 7417 SSSASVTSLLTPGQVKTTEVLDASAEPETSSPPSLSST 7454


>gi|186659512 calmodulin regulated spectrin-associated protein 1 [Homo
            sapiens]
          Length = 1602

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 7/106 (6%)

Query: 324  SEKDSN---SQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGD 380
            S KD+N    Q+ L   V D  + E+     S D S  E +           L  +D  D
Sbjct: 1184 SSKDANILSEQMSLK-EVLDASVKEV--GSSSSDVSGKESVPVEEPLRSRASLIEVDLSD 1240

Query: 381  LKVPEEEADSISNEDSATNSSD-NEDPQVNIVEEDPLNSGDDVSEQ 425
            LK P+E+ + +S + SA   S+ ++ P V    +D   + D+++++
Sbjct: 1241 LKAPDEDGELVSLDGSADLVSEGDQKPGVGFFFKDEQKAEDELAKK 1286



 Score = 29.6 bits (65), Expect = 5.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 318  PSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSS 357
            P   P+  + S  +VDLS     D+ GE++ +DGS D  S
Sbjct: 1222 PVEEPLRSRASLIEVDLSDLKAPDEDGELVSLDGSADLVS 1261


>gi|59814411 hypothetical protein LOC253725 [Homo sapiens]
          Length = 1318

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 320 NIPVSEKDSNSQVDLSIRVTDDDIGEIIQ-VDGSGDTSSNEEIGSTRDADENEFLGNIDG 378
           N    E D+N +V+L +   D  I   +  + GS      E++G    + E   +G+  G
Sbjct: 157 NSDSEEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRG 216

Query: 379 GDLKVPEEEADSISNEDSATNSSDNEDPQ--VNIVEEDPLNSGDDV---SEQDVPDLFDT 433
             +   EE+ +  S+ED A + SDNE  Q    + +E+  + G D+   SE++  D+ D 
Sbjct: 217 SIVDTEEEKEEEESDEDFA-HHSDNEQNQHTTQMSDEEEDDDGCDLFADSEKEEEDIEDI 275

Query: 434 D 434
           +
Sbjct: 276 E 276


>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
           sapiens]
          Length = 2168

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 8/164 (4%)

Query: 242 ISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKN 301
           + +P +   P  +  +S+  S  SG ++  +N  ++ ++ S +G+    V  I   +L  
Sbjct: 134 LGIPPLFAPPAQNHDSSSFHSRTSGKSN--RNGPEKGVNGSINGSNTSSVIGINTSVLST 191

Query: 302 RMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEI 361
                 S+ Q ++           ++ +    L  RV  D I +      + ++SSN + 
Sbjct: 192 T--ASSSMGQTKSTSSGGGNRKCNQEQSKNQPLDARV--DKIKDKKPRKKAMESSSNSDS 247

Query: 362 GSTRDAD-ENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNE 404
            S   +D  +E + + D  DL+  EEE D  S E+S  + SD+E
Sbjct: 248 DSGTSSDTSSEGISSSDSDDLEEDEEEEDQ-SIEESEDDDSDSE 290



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 63/286 (22%), Positives = 101/286 (35%), Gaps = 31/286 (10%)

Query: 166 SVIQTS--VPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGN 223
           SVIQ++  V  + P SL    +K   ++ ++  P +L +G  +     +  +  L S   
Sbjct: 373 SVIQSTGLVSNVKPLSLVNQAKKETYMKLIVPSPDVLKAGNKNTSEESSLLTSELRSKRE 432

Query: 224 EHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMAQNL---HDESLS 280
           ++K    + L  QESS  +         +V    SN ++  S  A   Q L   H     
Sbjct: 433 QYKQAFPSQLKKQESSKSLK--------KVIAALSNPKATSSSPAHPKQTLENNHPNPFL 484

Query: 281 TSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEE--------PSNIPVSEKDSNSQV 332
           T+     HQ    IQ  I +  +      K    I E        P + PV+   S  + 
Sbjct: 485 TNALLGNHQPNGVIQSVIQEAPLALTTKTKMQSKINENIAAASSTPFSSPVNLSTSGRRT 544

Query: 333 DLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENE----FLGNIDGGDLKVPEEEA 388
             +          I+   G     SN  +   +    +      +    G D  +P  + 
Sbjct: 545 PGNQTPVMPSASPILHSQGKEKAVSNN-VNPVKTQHHSHPAKSLVEQFRGTDSDIPSSKD 603

Query: 389 DSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTD 434
              SNED      D+E+      E+D   S D  SE D     DT+
Sbjct: 604 SEDSNEDEE---EDDEEEDEEDDEDD--ESDDSQSESDSNSESDTE 644



 Score = 29.3 bits (64), Expect = 7.7
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 351 GSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEA-DSISNEDS-ATNSSDNEDPQV 408
           G G+   N+E    +  D       +D    K P ++A +S SN DS +  SSD     +
Sbjct: 206 GGGNRKCNQEQSKNQPLD-----ARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEGI 260

Query: 409 NIVEEDPLNSGDDVSEQDVPDLFDTDN 435
           +  + D L   ++  +Q + +  D D+
Sbjct: 261 SSSDSDDLEEDEEEEDQSIEESEDDDS 287


>gi|54124343 hypothetical protein LOC387680 [Homo sapiens]
          Length = 1341

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)

Query: 320 NIPVSEKDSNSQVDLSIRVTDDDIGEIIQ-VDGSGDTSSNEEIGSTRDADENEFLGNIDG 378
           N    E D+N +V+L +   D  I   +  + GS      E++G    + E   +G+  G
Sbjct: 157 NSDSEEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRG 216

Query: 379 GDLKVPEEEADSISNEDSATNSSDNED----PQVNIVEED----PLNSGDDVSEQDVPDL 430
             +   EE+ +  S+ED A + SDNE      Q++  EED     L +  +  E+D+ D+
Sbjct: 217 SIVDTEEEKEEEESDEDFA-HHSDNEQNRHTTQMSDEEEDDDGCDLFADSEKEEEDIEDI 275


>gi|154090959 hypothetical protein LOC55747 [Homo sapiens]
          Length = 1253

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)

Query: 320 NIPVSEKDSNSQVDLSIRVTDDDIGEIIQ-VDGSGDTSSNEEIGSTRDADENEFLGNIDG 378
           N    E D+N +V+L +   D  I   +  + GS      E++G    + E   +G+  G
Sbjct: 69  NSDSEEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRG 128

Query: 379 GDLKVPEEEADSISNEDSATNSSDNED----PQVNIVEED----PLNSGDDVSEQDVPDL 430
             +   EE+ +  S+ED A + SDNE      Q++  EED     L +  +  E+D+ D+
Sbjct: 129 SIVDTEEEKEEEESDEDFA-HHSDNEQNRHTTQMSDEEEDDDGCDLFADSEKEEEDIEDI 187


>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
           precursor [Homo sapiens]
          Length = 513

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 310 KQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGD----TSSNEEIGSTR 365
           K+  + EE  N+     +S+ + +LS +    +  E +  +  GD    T+S  E     
Sbjct: 322 KENLSQEESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDS 381

Query: 366 DADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQ-VNIVEEDPL----NSGD 420
           D+ E +    +     +  EE+ADS S+E    +    E P+  N   ++ L    +S +
Sbjct: 382 DSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAE 441

Query: 421 DVSEQDVPDLFDTDN 435
             SE+   +  D+D+
Sbjct: 442 SQSEESHSEEDDSDS 456


>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
           precursor [Homo sapiens]
          Length = 497

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 310 KQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGD----TSSNEEIGSTR 365
           K+  + EE  N+     +S+ + +LS +    +  E +  +  GD    T+S  E     
Sbjct: 306 KENLSQEESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDS 365

Query: 366 DADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQ-VNIVEEDPL----NSGD 420
           D+ E +    +     +  EE+ADS S+E    +    E P+  N   ++ L    +S +
Sbjct: 366 DSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAE 425

Query: 421 DVSEQDVPDLFDTDN 435
             SE+   +  D+D+
Sbjct: 426 SQSEESHSEEDDSDS 440


>gi|42415492 chromosome 14 open reading frame 106 [Homo sapiens]
          Length = 1132

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 304 YGCDSV--KQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEI 361
           + CD++  K  ++ E P    ++   SN Q   ++R  DD +   IQ +G GD  SN+E+
Sbjct: 526 FDCDNLELKSNKHSESPGATELNMCHSNCQNKPTLRFPDDQVNNTIQ-NGGGDDLSNQEL 584


>gi|31581524 cordon-bleu homolog [Homo sapiens]
          Length = 1261

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 16/63 (25%)

Query: 269 SMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDS 328
           S A NLH ++L+                  +K+++YGC   ++ +  E  ++ PV+EKDS
Sbjct: 633 SFASNLHTDNLNAK----------------VKDKVYGCADGERTQATERVNSQPVNEKDS 676

Query: 329 NSQ 331
           N +
Sbjct: 677 NDK 679


>gi|210147457 intermediate filament family orphan 2 [Homo sapiens]
          Length = 517

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 16/127 (12%)

Query: 306 CDSVKQPRNIEEPSNI-PVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGST 364
           CD V Q RN E+ S I  V  K    +V      +DDDI E    DG  +  S++E+GS 
Sbjct: 305 CD-VAQQRNSEDVSKIFQVVPKKKERKV-----ASDDDISE---QDGEVNRFSDDEVGSM 355

Query: 365 RDADENEFLGNIDGGDLKVPEEEADSIS---NEDSATNSSD--NEDPQVNIVEEDPLNSG 419
              DE + + N         +++ DS++   NED+     D  N +P +++  E   N G
Sbjct: 356 NITDEMKRMFNQLRETFDF-DDDCDSLTWEENEDTLLLWEDFTNCNPTIDLQGEQEENLG 414

Query: 420 DDVSEQD 426
           + + E +
Sbjct: 415 NLIHETE 421


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.129    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,636,840
Number of Sequences: 37866
Number of extensions: 835654
Number of successful extensions: 3114
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 2633
Number of HSP's gapped (non-prelim): 381
length of query: 453
length of database: 18,247,518
effective HSP length: 106
effective length of query: 347
effective length of database: 14,233,722
effective search space: 4939101534
effective search space used: 4939101534
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press