Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: C14orf106 Sequence: fasta or formatted (1132aa) NCBI GI: 42415492
Description:

chromosome 14 open reading frame 106

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         43           3
 C cysteine            1.4         16           1
 D aspartate           5.1         58           4
 E glutamate           8.0         91           3
 F phenylalanine       3.5         40           2
 G glycine             4.3         49           3
 H histidine           1.9         22           1
 I isoleucine          5.7         65           2
 K lysine             11.7        133           3
 L leucine             7.6         86           2
 M methionine          2.1         24           1
 N asparagine          7.2         81           3
 P proline             4.9         55           2
 Q glutamine           5.6         63           2
 R arginine            4.8         54           2
 S serine              8.4         95           2
 T threonine           7.2         81           3
 V valine              4.3         49           2
 W tryptophan          0.5          6           1
 Y tyrosine            1.9         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 14 open reading frame 106 
FAM133B               0.011   hypothetical protein LOC257415 isoform 2 
FAM133B               0.011   hypothetical protein LOC257415 isoform 1 
ANKRD12               0.011   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.011   ankyrin repeat domain 12 isoform 1 
NCOR1                 0.010   nuclear receptor co-repressor 1 
ANK3                  0.009   ankyrin 3 isoform 1 
CYLC1                 0.008   cylicin, basic protein of sperm head cytoskeleton 1...
CENPE                 0.008   centromere protein E 
EEA1                  0.008   early endosome antigen 1, 162kD 
NIPBL                 0.008   delangin isoform B 
NIPBL                 0.008   delangin isoform A 
MYH3                  0.007   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MLL5                  0.007   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.007   myeloid/lymphoid or mixed-lineage leukemia 5 
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 1 
TAOK1                 0.007   TAO kinase 1 
NKTR                  0.007   natural killer-tumor recognition sequence 
DNAJC2                0.007   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...
DNAJC2                0.007   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform...
RB1CC1                0.006   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.006   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
BOD1L                 0.006   biorientation of chromosomes in cell division 1-like...
RSF1                  0.006   remodeling and spacing factor 1 
NEFH                  0.006   neurofilament, heavy polypeptide 200kDa 
MYH15                 0.006   myosin, heavy polypeptide 15 
CCDC110               0.006   coiled-coil domain containing 110 isoform b 
CCDC110               0.006   coiled-coil domain containing 110 isoform a 
KIF4B                 0.005   kinesin family member 4B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press