Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: STON1-GTF2A1L Sequence: fasta or formatted (1182aa) NCBI GI: 29553944
Description:

STON1-GTF2A1L protein

Referenced in:

RNA Polymerase and General Transcription Factors
ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         48           1
 C cysteine            2.0         24           1
 D aspartate           5.9         70           3
 E glutamate           7.3         86           3
 F phenylalanine       4.2         50           2
 G glycine             5.2         61           2
 H histidine           2.9         34           1
 I isoleucine          4.9         58           2
 K lysine              5.9         70           2
 L leucine             9.0        106           2
 M methionine          1.5         18           2
 N asparagine          4.5         53           1
 P proline             6.9         82           2
 Q glutamine           5.8         69           2
 R arginine            3.2         38           2
 S serine             11.3        134           3
 T threonine           4.7         55           2
 V valine              6.9         82           4
 W tryptophan          1.1         13           1
 Y tyrosine            2.6         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   STON1-GTF2A1L protein 
STON1                 0.606   stonin 1 
GTF2A1L               0.388   general transcription factor IIA, 1-like isoform 1 [...
GTF2A1L               0.356   general transcription factor IIA, 1-like isoform 2 [...
STON2                 0.158   stonin 2 
GTF2A1                0.046   TFIIA alpha, p55 isoform 2 
GTF2A1                0.046   TFIIA alpha, p55 isoform 1 
AP1M1                 0.020   adaptor-related protein complex 1, mu 1 subunit isof...
AP1M1                 0.019   adaptor-related protein complex 1, mu 1 subunit iso...
AP1M2                 0.016   adaptor-related protein complex 1, mu 2 subunit [Homo...
AP2M1                 0.015   adaptor-related protein complex 2, mu 1 subunit isof...
AP2M1                 0.015   adaptor-related protein complex 2, mu 1 subunit isof...
DSPP                  0.009   dentin sialophosphoprotein preproprotein 
ARHGAP17              0.008   nadrin isoform 1 
ARHGAP17              0.008   nadrin isoform 2 
RFX7                  0.008   regulatory factor X domain containing 2 
FAM75C1               0.006   family with sequence similarity 75, member C1 [Homo...
AP4M1                 0.006   adaptor-related protein complex 4, mu 1 subunit [Hom...
ACRC                  0.006   ACRC protein 
TSPYL2                0.006   TSPY-like 2 
KDM6B                 0.006   lysine (K)-specific demethylase 6B 
MYT1L                 0.005   myelin transcription factor 1-like 
BCOR                  0.005   BCL-6 interacting corepressor isoform a 
BCOR                  0.005   BCL-6 interacting corepressor isoform c 
BCOR                  0.005   BCL-6 interacting corepressor isoform b 
BCOR                  0.005   BCL-6 interacting corepressor isoform a 
MLL2                  0.005   myeloid/lymphoid or mixed-lineage leukemia 2 
MED1                  0.005   mediator complex subunit 1 
TENC1                 0.005   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.005   tensin like C1 domain containing phosphatase isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press