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Search of human proteins with 26667219
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|26667219 eyes absent 1 isoform c [Homo sapiens]
(557 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|26667219 eyes absent 1 isoform c [Homo sapiens] 1134 0.0
gi|19923100 eyes absent 1 isoform b [Homo sapiens] 1112 0.0
gi|26667216 eyes absent 1 isoform b [Homo sapiens] 1112 0.0
gi|26667222 eyes absent 1 isoform a [Homo sapiens] 1029 0.0
gi|98991763 eyes absent 4 isoform b [Homo sapiens] 772 0.0
gi|98991760 eyes absent 4 isoform a [Homo sapiens] 763 0.0
gi|26667257 eyes absent 4 isoform d [Homo sapiens] 747 0.0
gi|26667227 eyes absent 2 isoform a [Homo sapiens] 625 e-179
gi|26667240 eyes absent 2 isoform b [Homo sapiens] 625 e-179
gi|26667235 eyes absent 2 isoform a [Homo sapiens] 625 e-179
gi|26667232 eyes absent 2 isoform a [Homo sapiens] 625 e-179
gi|26667230 eyes absent 2 isoform c [Homo sapiens] 581 e-166
gi|26667243 eyes absent 3 [Homo sapiens] 474 e-134
gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo s... 56 8e-08
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 56 8e-08
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap... 56 8e-08
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s... 54 3e-07
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 53 8e-07
gi|161016767 mucin 21 [Homo sapiens] 52 1e-06
gi|33946327 nucleoporin 214kDa [Homo sapiens] 52 1e-06
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s... 52 2e-06
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 51 2e-06
gi|161019170 mucin 5AC [Homo sapiens] 51 3e-06
gi|167736355 mucin 4 isoform a [Homo sapiens] 51 3e-06
gi|55750053 atrophin-1 [Homo sapiens] 50 5e-06
gi|55750041 atrophin-1 [Homo sapiens] 50 5e-06
gi|5454064 RNA binding motif protein 14 [Homo sapiens] 50 7e-06
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 49 2e-05
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 49 2e-05
gi|151301154 mucin 6, gastric [Homo sapiens] 49 2e-05
>gi|26667219 eyes absent 1 isoform c [Homo sapiens]
Length = 557
Score = 1134 bits (2932), Expect = 0.0
Identities = 557/557 (100%), Positives = 557/557 (100%)
Query: 1 MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGS 60
MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGS
Sbjct: 1 MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGS 60
Query: 61 LNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ 120
LNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ
Sbjct: 61 LNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ 120
Query: 121 ATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQ 180
ATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQ
Sbjct: 121 ATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQ 180
Query: 181 GSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNT 240
GSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNT
Sbjct: 181 GSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNT 240
Query: 241 SPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRG 300
SPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRG
Sbjct: 241 SPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRG 300
Query: 301 RGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRECDQVHIDDVSSDDN 360
RGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRECDQVHIDDVSSDDN
Sbjct: 301 RGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRECDQVHIDDVSSDDN 360
Query: 361 GQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGL 420
GQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGL
Sbjct: 361 GQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGL 420
Query: 421 LGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLY 480
LGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLY
Sbjct: 421 LGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLY 480
Query: 481 GLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRIS 540
GLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRIS
Sbjct: 481 GLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRIS 540
Query: 541 SHSDLMALHHALELEYL 557
SHSDLMALHHALELEYL
Sbjct: 541 SHSDLMALHHALELEYL 557
>gi|19923100 eyes absent 1 isoform b [Homo sapiens]
Length = 592
Score = 1112 bits (2875), Expect = 0.0
Identities = 557/592 (94%), Positives = 557/592 (94%), Gaps = 35/592 (5%)
Query: 1 MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGS 60
MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGS
Sbjct: 1 MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGS 60
Query: 61 LNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ 120
LNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ
Sbjct: 61 LNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ 120
Query: 121 ATAYATYPQPGQPYGISSYG-----IKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPY 175
ATAYATYPQPGQPYGISSYG IKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPY
Sbjct: 121 ATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPY 180
Query: 176 SYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYM 235
SYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYM
Sbjct: 181 SYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYM 240
Query: 236 TSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSD 295
TSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSD
Sbjct: 241 TSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSD 300
Query: 296 GKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGR---------- 345
GKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGR
Sbjct: 301 GKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGL 360
Query: 346 --------------------ECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCL 385
ECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCL
Sbjct: 361 RMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCL 420
Query: 386 ATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLT 445
ATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLT
Sbjct: 421 ATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLT 480
Query: 446 LALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFER 505
LALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFER
Sbjct: 481 LALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFER 540
Query: 506 IIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLMALHHALELEYL 557
IIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLMALHHALELEYL
Sbjct: 541 IIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLMALHHALELEYL 592
>gi|26667216 eyes absent 1 isoform b [Homo sapiens]
Length = 592
Score = 1112 bits (2875), Expect = 0.0
Identities = 557/592 (94%), Positives = 557/592 (94%), Gaps = 35/592 (5%)
Query: 1 MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGS 60
MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGS
Sbjct: 1 MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGS 60
Query: 61 LNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ 120
LNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ
Sbjct: 61 LNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ 120
Query: 121 ATAYATYPQPGQPYGISSYG-----IKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPY 175
ATAYATYPQPGQPYGISSYG IKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPY
Sbjct: 121 ATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPY 180
Query: 176 SYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYM 235
SYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYM
Sbjct: 181 SYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYM 240
Query: 236 TSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSD 295
TSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSD
Sbjct: 241 TSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSD 300
Query: 296 GKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGR---------- 345
GKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGR
Sbjct: 301 GKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGL 360
Query: 346 --------------------ECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCL 385
ECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCL
Sbjct: 361 RMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCL 420
Query: 386 ATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLT 445
ATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLT
Sbjct: 421 ATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLT 480
Query: 446 LALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFER 505
LALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFER
Sbjct: 481 LALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFER 540
Query: 506 IIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLMALHHALELEYL 557
IIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLMALHHALELEYL
Sbjct: 541 IIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLMALHHALELEYL 592
>gi|26667222 eyes absent 1 isoform a [Homo sapiens]
Length = 559
Score = 1029 bits (2661), Expect = 0.0
Identities = 516/551 (93%), Positives = 516/551 (93%), Gaps = 35/551 (6%)
Query: 42 VKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTP 101
VKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTP
Sbjct: 9 VKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTP 68
Query: 102 SSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYG-----IKTEGGLSQSQSPGQT 156
SSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYG IKTEGGLSQSQSPGQT
Sbjct: 69 SSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQT 128
Query: 157 GFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSF 216
GFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSF
Sbjct: 129 GFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSF 188
Query: 217 GQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIH 276
GQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIH
Sbjct: 189 GQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIH 248
Query: 277 SPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLT 336
SPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLT
Sbjct: 249 SPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLT 308
Query: 337 GSYANRYGR------------------------------ECDQVHIDDVSSDDNGQDLST 366
GSYANRYGR ECDQVHIDDVSSDDNGQDLST
Sbjct: 309 GSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLST 368
Query: 367 YNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKR 426
YNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKR
Sbjct: 369 YNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKR 428
Query: 427 EAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVF 486
EAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVF
Sbjct: 429 EAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVF 488
Query: 487 PIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLM 546
PIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLM
Sbjct: 489 PIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLM 548
Query: 547 ALHHALELEYL 557
ALHHALELEYL
Sbjct: 549 ALHHALELEYL 559
>gi|98991763 eyes absent 4 isoform b [Homo sapiens]
Length = 616
Score = 772 bits (1994), Expect = 0.0
Identities = 408/600 (68%), Positives = 466/600 (77%), Gaps = 56/600 (9%)
Query: 1 MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGT-----EVKTEPMSSSETAST 55
MEMQDL SPH+ L G ++P KL S+++S S+T NGT VKTEP++SSET +T
Sbjct: 30 MEMQDLASPHT-LVGGGDTPGSSKLEKSNLSSTSVTTNGTGVSLLAVKTEPLNSSETTAT 88
Query: 56 TADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAY-GQTQF 114
T DG+L+ F+GS I SS +SPR HQ+SP Q+YPS +PYPHIL TP++QTM+AY GQTQ+
Sbjct: 89 TGDGALDTFTGSVITSSGYSPRSAHQYSP-QLYPS-KPYPHILSTPAAQTMSAYAGQTQY 146
Query: 115 TTGMQQATAYATYPQPGQPYGISSY-------GIKTEGGLSQSQSPGQTGFLSYGTSFST 167
+ GMQQ Y Y Q GQPY + +Y IKTE GLSQ+QSP Q+G LSY FST
Sbjct: 147 S-GMQQPAVYTAYSQTGQPYSLPTYDLGVMLPAIKTESGLSQTQSPLQSGCLSYSPGFST 205
Query: 168 PQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNS 227
PQPGQ PYSYQM GSSF SS IY NNS++NS+ F+ SQQDYPSY +FGQ QYAQYY++
Sbjct: 206 PQPGQTPYSYQMPGSSFAPSSTIYA-NNSVSNSTNFSGSQQDYPSYTAFGQNQYAQYYSA 264
Query: 228 SPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDS 287
S Y A YMTS+NT+ TPS+ +TYQLQE G+T+Q E+ T+ SPSTPIKD D
Sbjct: 265 STYGA-YMTSNNTADGTPSSTSTYQLQESLPGLTNQP-----GEFDTMQSPSTPIKDLD- 317
Query: 288 DRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGR-- 345
+R R S KSRGRGR+NN PSPPPDSDLERVF+WDLDETIIVFHSLLTGSYA +YG+
Sbjct: 318 ERTCRSSGSKSRGRGRKNN-PSPPPDSDLERVFVWDLDETIIVFHSLLTGSYAQKYGKDP 376
Query: 346 ----------------------------ECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAA 377
ECDQVHIDDVSSDDNGQDLSTY+F TDGF AA
Sbjct: 377 PMAVTLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYSFATDGFHAA 436
Query: 378 ATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIE 437
A+SANLCL TGVRGGVDWMRKLAFRYRRVKE+YNTYKNNVGGLLGPAKR+AWLQLRAEIE
Sbjct: 437 ASSANLCLPTGVRGGVDWMRKLAFRYRRVKELYNTYKNNVGGLLGPAKRDAWLQLRAEIE 496
Query: 438 ALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKI 497
LTDSWLT ALK+LS+I +R+NC+N+LVTTTQLIPALAKVLLY LG FPIENIYSATKI
Sbjct: 497 GLTDSWLTNALKSLSIISTRSNCINVLVTTTQLIPALAKVLLYSLGGAFPIENIYSATKI 556
Query: 498 GKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLMALHHALELEYL 557
GKESCFERI+QRFGRKVVYVVIGDGVEEEQ AKKH MPFWRISSHSDL+ALH ALELEYL
Sbjct: 557 GKESCFERIMQRFGRKVVYVVIGDGVEEEQAAKKHNMPFWRISSHSDLLALHQALELEYL 616
>gi|98991760 eyes absent 4 isoform a [Homo sapiens]
Length = 639
Score = 763 bits (1971), Expect = 0.0
Identities = 408/623 (65%), Positives = 466/623 (74%), Gaps = 79/623 (12%)
Query: 1 MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGT-------------------- 40
MEMQDL SPH+ L G ++P KL S+++S S+T NGT
Sbjct: 30 MEMQDLASPHT-LVGGGDTPGSSKLEKSNLSSTSVTTNGTGGENMTVLNTADWLLSCNTP 88
Query: 41 --------EVKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNR 92
VKTEP++SSET +TT DG+L+ F+GS I SS +SPR HQ+SP Q+YPS +
Sbjct: 89 SSATMSLLAVKTEPLNSSETTATTGDGALDTFTGSVITSSGYSPRSAHQYSP-QLYPS-K 146
Query: 93 PYPHILPTPSSQTMAAY-GQTQFTTGMQQATAYATYPQPGQPYGISSY-------GIKTE 144
PYPHIL TP++QTM+AY GQTQ++ GMQQ Y Y Q GQPY + +Y IKTE
Sbjct: 147 PYPHILSTPAAQTMSAYAGQTQYS-GMQQPAVYTAYSQTGQPYSLPTYDLGVMLPAIKTE 205
Query: 145 GGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFN 204
GLSQ+QSP Q+G LSY FSTPQPGQ PYSYQM GSSF SS IY NNS++NS+ F+
Sbjct: 206 SGLSQTQSPLQSGCLSYSPGFSTPQPGQTPYSYQMPGSSFAPSSTIYA-NNSVSNSTNFS 264
Query: 205 SSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQA 264
SQQDYPSY +FGQ QYAQYY++S Y A YMTS+NT+ TPS+ +TYQLQE G+T+Q
Sbjct: 265 GSQQDYPSYTAFGQNQYAQYYSASTYGA-YMTSNNTADGTPSSTSTYQLQESLPGLTNQP 323
Query: 265 VTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDL 324
E+ T+ SPSTPIKD D +R R S KSRGRGR+NN PSPPPDSDLERVF+WDL
Sbjct: 324 -----GEFDTMQSPSTPIKDLD-ERTCRSSGSKSRGRGRKNN-PSPPPDSDLERVFVWDL 376
Query: 325 DETIIVFHSLLTGSYANRYGR------------------------------ECDQVHIDD 354
DETIIVFHSLLTGSYA +YG+ ECDQVHIDD
Sbjct: 377 DETIIVFHSLLTGSYAQKYGKDPPMAVTLGLRMEEMIFNLADTHLFFNDLEECDQVHIDD 436
Query: 355 VSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYK 414
VSSDDNGQDLSTY+F TDGF AAA+SANLCL TGVRGGVDWMRKLAFRYRRVKE+YNTYK
Sbjct: 437 VSSDDNGQDLSTYSFATDGFHAAASSANLCLPTGVRGGVDWMRKLAFRYRRVKELYNTYK 496
Query: 415 NNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPAL 474
NNVGGLLGPAKR+AWLQLRAEIE LTDSWLT ALK+LS+I +R+NC+N+LVTTTQLIPAL
Sbjct: 497 NNVGGLLGPAKRDAWLQLRAEIEGLTDSWLTNALKSLSIISTRSNCINVLVTTTQLIPAL 556
Query: 475 AKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAM 534
AKVLLY LG FPIENIYSATKIGKESCFERI+QRFGRKVVYVVIGDGVEEEQ AKKH M
Sbjct: 557 AKVLLYSLGGAFPIENIYSATKIGKESCFERIMQRFGRKVVYVVIGDGVEEEQAAKKHNM 616
Query: 535 PFWRISSHSDLMALHHALELEYL 557
PFWRISSHSDL+ALH ALELEYL
Sbjct: 617 PFWRISSHSDLLALHQALELEYL 639
>gi|26667257 eyes absent 4 isoform d [Homo sapiens]
Length = 639
Score = 747 bits (1928), Expect = 0.0
Identities = 398/623 (63%), Positives = 459/623 (73%), Gaps = 79/623 (12%)
Query: 1 MEMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGT-------------------- 40
MEMQDL SPH+ L G ++P KL S+++S S+T NGT
Sbjct: 30 MEMQDLASPHT-LVGGGDTPGSSKLEKSNLSSTSVTTNGTGGENMTVLNTADWLLSCNTP 88
Query: 41 --------EVKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNR 92
VKTEP++SSET +TT DG+L+ F+GS I SS +SPR HQ+SP Q+YPS +
Sbjct: 89 SSATMSLLAVKTEPLNSSETTATTGDGALDTFTGSVITSSGYSPRSAHQYSP-QLYPS-K 146
Query: 93 PYPHILPTPSSQTMAAY-GQTQFTTGMQQATAYATYPQPGQPYGISSY-------GIKTE 144
PYPHIL TP++QTM+AY GQTQ++ GMQQ Y Y Q GQPY + +Y IKTE
Sbjct: 147 PYPHILSTPAAQTMSAYAGQTQYS-GMQQPAVYTAYSQTGQPYSLPTYDLGVMLPAIKTE 205
Query: 145 GGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFN 204
GLSQ+QSP Q+G LSY FSTPQPGQ PYSYQM GSSF SS IY NNS++NS+ F+
Sbjct: 206 SGLSQTQSPLQSGCLSYSPGFSTPQPGQTPYSYQMPGSSFAPSSTIYA-NNSVSNSTNFS 264
Query: 205 SSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQA 264
SQQDYPSY +FGQ QYAQYY++S Y A YMTS+NT+ TPS+ +TYQLQE G+T+Q
Sbjct: 265 GSQQDYPSYTAFGQNQYAQYYSASTYGA-YMTSNNTADGTPSSTSTYQLQESLPGLTNQP 323
Query: 265 VTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDL 324
E+ T+ SPSTPIKD D +R R S KSRGRGR+NN PSPPPDSDLERVF+WDL
Sbjct: 324 -----GEFDTMQSPSTPIKDLD-ERTCRSSGSKSRGRGRKNN-PSPPPDSDLERVFVWDL 376
Query: 325 DETIIVFHSLLTGSYANRYGR------------------------------ECDQVHIDD 354
DETIIVFHSLLTGSYA +YG+ ECDQVHIDD
Sbjct: 377 DETIIVFHSLLTGSYAQKYGKDPPMAVTLGLRMEEMIFNLADTHLFFNDLEECDQVHIDD 436
Query: 355 VSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYK 414
VSSDDNGQDLSTY+F TDGF AAA+SANLCL TGVRGGVDWMRKLAFRYRRVKE+YNTYK
Sbjct: 437 VSSDDNGQDLSTYSFATDGFHAAASSANLCLPTGVRGGVDWMRKLAFRYRRVKELYNTYK 496
Query: 415 NNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPAL 474
NNVGGLLGPAKR+AWLQLRAEIE LTDSWLT ALK+LS+I +R+NC+N+LVTTTQLIPAL
Sbjct: 497 NNVGGLLGPAKRDAWLQLRAEIEGLTDSWLTNALKSLSIISTRSNCINVLVTTTQLIPAL 556
Query: 475 AKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAM 534
AKVLLY LG FPIENIYSATKIGKESCFERI+ RFG + YVVIGDG +EE A +H M
Sbjct: 557 AKVLLYSLGGAFPIENIYSATKIGKESCFERIVSRFGTNITYVVIGDGRDEEHAANQHNM 616
Query: 535 PFWRISSHSDLMALHHALELEYL 557
PFWRISSHSDL+ALH ALELEYL
Sbjct: 617 PFWRISSHSDLLALHQALELEYL 639
>gi|26667227 eyes absent 2 isoform a [Homo sapiens]
Length = 538
Score = 625 bits (1613), Expect = e-179
Identities = 315/497 (63%), Positives = 370/497 (74%), Gaps = 39/497 (7%)
Query: 91 NRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQS 150
+R P +LP S MAAYGQTQ++ G+QQAT Y YP P Q YGI SY IKTE L+ S
Sbjct: 51 SRSCPRVLPRQPSTAMAAYGQTQYSAGIQQATPYTAYPPPAQAYGIPSYSIKTEDSLNHS 110
Query: 151 QSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDY 210
PGQ+GFLSYG+SFST GQ+PY+YQM G++ G Y G N L N++GF S QDY
Sbjct: 111 --PGQSGFLSYGSSFSTSPTGQSPYTYQMHGTT-----GFYQGGNGLGNAAGFGSVHQDY 163
Query: 211 PSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTA 270
PSYP F Q QY QYY SS Y Y+ +S+ P+ P + +TY LQE + +Q+
Sbjct: 164 PSYPGFPQSQYPQYYGSS-YNPPYVPASSICPS-PLSTSTYVLQEASHNVPNQSSESLAG 221
Query: 271 EYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIV 330
EY+T + PSTP K+ D+DR R SDGK RGR +R+++PSP D+++ERVF+WDLDETII+
Sbjct: 222 EYNTHNGPSTPAKEGDTDRPHRASDGKLRGRSKRSSDPSPAGDNEIERVFVWDLDETIII 281
Query: 331 FHSLLTGSYANRYGR------------------------------ECDQVHIDDVSSDDN 360
FHSLLTG++A+RYG+ +CDQ+H+DDVSSDDN
Sbjct: 282 FHSLLTGTFASRYGKDTTTSVRIGLMMEEMIFNLADTHLFFNDLEDCDQIHVDDVSSDDN 341
Query: 361 GQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGL 420
GQDLSTYNF DGF ++A ANLCL +GV GGVDWMRKLAFRYRRVKE+YNTYKNNVGGL
Sbjct: 342 GQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLAFRYRRVKEMYNTYKNNVGGL 401
Query: 421 LGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLY 480
+G KRE WLQLRAE+EALTD WLT +LKAL+LI+SR NCVN+LVTTTQLIPALAKVLLY
Sbjct: 402 IGTPKRETWLQLRAELEALTDLWLTHSLKALNLINSRPNCVNVLVTTTQLIPALAKVLLY 461
Query: 481 GLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRIS 540
GLG VFPIENIYSATK GKESCFERI+QRFGRK VYVVIGDGVEEEQGAKKH MPFWRIS
Sbjct: 462 GLGSVFPIENIYSATKTGKESCFERIMQRFGRKAVYVVIGDGVEEEQGAKKHNMPFWRIS 521
Query: 541 SHSDLMALHHALELEYL 557
H+DL AL HALELEYL
Sbjct: 522 CHADLEALRHALELEYL 538
>gi|26667240 eyes absent 2 isoform b [Homo sapiens]
Length = 543
Score = 625 bits (1613), Expect = e-179
Identities = 315/497 (63%), Positives = 370/497 (74%), Gaps = 39/497 (7%)
Query: 91 NRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQS 150
+R P +LP S MAAYGQTQ++ G+QQAT Y YP P Q YGI SY IKTE L+ S
Sbjct: 56 SRSCPRVLPRQPSTAMAAYGQTQYSAGIQQATPYTAYPPPAQAYGIPSYSIKTEDSLNHS 115
Query: 151 QSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDY 210
PGQ+GFLSYG+SFST GQ+PY+YQM G++ G Y G N L N++GF S QDY
Sbjct: 116 --PGQSGFLSYGSSFSTSPTGQSPYTYQMHGTT-----GFYQGGNGLGNAAGFGSVHQDY 168
Query: 211 PSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTA 270
PSYP F Q QY QYY SS Y Y+ +S+ P+ P + +TY LQE + +Q+
Sbjct: 169 PSYPGFPQSQYPQYYGSS-YNPPYVPASSICPS-PLSTSTYVLQEASHNVPNQSSESLAG 226
Query: 271 EYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIV 330
EY+T + PSTP K+ D+DR R SDGK RGR +R+++PSP D+++ERVF+WDLDETII+
Sbjct: 227 EYNTHNGPSTPAKEGDTDRPHRASDGKLRGRSKRSSDPSPAGDNEIERVFVWDLDETIII 286
Query: 331 FHSLLTGSYANRYGR------------------------------ECDQVHIDDVSSDDN 360
FHSLLTG++A+RYG+ +CDQ+H+DDVSSDDN
Sbjct: 287 FHSLLTGTFASRYGKDTTTSVRIGLMMEEMIFNLADTHLFFNDLEDCDQIHVDDVSSDDN 346
Query: 361 GQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGL 420
GQDLSTYNF DGF ++A ANLCL +GV GGVDWMRKLAFRYRRVKE+YNTYKNNVGGL
Sbjct: 347 GQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLAFRYRRVKEMYNTYKNNVGGL 406
Query: 421 LGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLY 480
+G KRE WLQLRAE+EALTD WLT +LKAL+LI+SR NCVN+LVTTTQLIPALAKVLLY
Sbjct: 407 IGTPKRETWLQLRAELEALTDLWLTHSLKALNLINSRPNCVNVLVTTTQLIPALAKVLLY 466
Query: 481 GLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRIS 540
GLG VFPIENIYSATK GKESCFERI+QRFGRK VYVVIGDGVEEEQGAKKH MPFWRIS
Sbjct: 467 GLGSVFPIENIYSATKTGKESCFERIMQRFGRKAVYVVIGDGVEEEQGAKKHNMPFWRIS 526
Query: 541 SHSDLMALHHALELEYL 557
H+DL AL HALELEYL
Sbjct: 527 CHADLEALRHALELEYL 543
>gi|26667235 eyes absent 2 isoform a [Homo sapiens]
Length = 538
Score = 625 bits (1613), Expect = e-179
Identities = 315/497 (63%), Positives = 370/497 (74%), Gaps = 39/497 (7%)
Query: 91 NRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQS 150
+R P +LP S MAAYGQTQ++ G+QQAT Y YP P Q YGI SY IKTE L+ S
Sbjct: 51 SRSCPRVLPRQPSTAMAAYGQTQYSAGIQQATPYTAYPPPAQAYGIPSYSIKTEDSLNHS 110
Query: 151 QSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDY 210
PGQ+GFLSYG+SFST GQ+PY+YQM G++ G Y G N L N++GF S QDY
Sbjct: 111 --PGQSGFLSYGSSFSTSPTGQSPYTYQMHGTT-----GFYQGGNGLGNAAGFGSVHQDY 163
Query: 211 PSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTA 270
PSYP F Q QY QYY SS Y Y+ +S+ P+ P + +TY LQE + +Q+
Sbjct: 164 PSYPGFPQSQYPQYYGSS-YNPPYVPASSICPS-PLSTSTYVLQEASHNVPNQSSESLAG 221
Query: 271 EYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIV 330
EY+T + PSTP K+ D+DR R SDGK RGR +R+++PSP D+++ERVF+WDLDETII+
Sbjct: 222 EYNTHNGPSTPAKEGDTDRPHRASDGKLRGRSKRSSDPSPAGDNEIERVFVWDLDETIII 281
Query: 331 FHSLLTGSYANRYGR------------------------------ECDQVHIDDVSSDDN 360
FHSLLTG++A+RYG+ +CDQ+H+DDVSSDDN
Sbjct: 282 FHSLLTGTFASRYGKDTTTSVRIGLMMEEMIFNLADTHLFFNDLEDCDQIHVDDVSSDDN 341
Query: 361 GQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGL 420
GQDLSTYNF DGF ++A ANLCL +GV GGVDWMRKLAFRYRRVKE+YNTYKNNVGGL
Sbjct: 342 GQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLAFRYRRVKEMYNTYKNNVGGL 401
Query: 421 LGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLY 480
+G KRE WLQLRAE+EALTD WLT +LKAL+LI+SR NCVN+LVTTTQLIPALAKVLLY
Sbjct: 402 IGTPKRETWLQLRAELEALTDLWLTHSLKALNLINSRPNCVNVLVTTTQLIPALAKVLLY 461
Query: 481 GLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRIS 540
GLG VFPIENIYSATK GKESCFERI+QRFGRK VYVVIGDGVEEEQGAKKH MPFWRIS
Sbjct: 462 GLGSVFPIENIYSATKTGKESCFERIMQRFGRKAVYVVIGDGVEEEQGAKKHNMPFWRIS 521
Query: 541 SHSDLMALHHALELEYL 557
H+DL AL HALELEYL
Sbjct: 522 CHADLEALRHALELEYL 538
>gi|26667232 eyes absent 2 isoform a [Homo sapiens]
Length = 538
Score = 625 bits (1613), Expect = e-179
Identities = 315/497 (63%), Positives = 370/497 (74%), Gaps = 39/497 (7%)
Query: 91 NRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQS 150
+R P +LP S MAAYGQTQ++ G+QQAT Y YP P Q YGI SY IKTE L+ S
Sbjct: 51 SRSCPRVLPRQPSTAMAAYGQTQYSAGIQQATPYTAYPPPAQAYGIPSYSIKTEDSLNHS 110
Query: 151 QSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDY 210
PGQ+GFLSYG+SFST GQ+PY+YQM G++ G Y G N L N++GF S QDY
Sbjct: 111 --PGQSGFLSYGSSFSTSPTGQSPYTYQMHGTT-----GFYQGGNGLGNAAGFGSVHQDY 163
Query: 211 PSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTA 270
PSYP F Q QY QYY SS Y Y+ +S+ P+ P + +TY LQE + +Q+
Sbjct: 164 PSYPGFPQSQYPQYYGSS-YNPPYVPASSICPS-PLSTSTYVLQEASHNVPNQSSESLAG 221
Query: 271 EYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIV 330
EY+T + PSTP K+ D+DR R SDGK RGR +R+++PSP D+++ERVF+WDLDETII+
Sbjct: 222 EYNTHNGPSTPAKEGDTDRPHRASDGKLRGRSKRSSDPSPAGDNEIERVFVWDLDETIII 281
Query: 331 FHSLLTGSYANRYGR------------------------------ECDQVHIDDVSSDDN 360
FHSLLTG++A+RYG+ +CDQ+H+DDVSSDDN
Sbjct: 282 FHSLLTGTFASRYGKDTTTSVRIGLMMEEMIFNLADTHLFFNDLEDCDQIHVDDVSSDDN 341
Query: 361 GQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGL 420
GQDLSTYNF DGF ++A ANLCL +GV GGVDWMRKLAFRYRRVKE+YNTYKNNVGGL
Sbjct: 342 GQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLAFRYRRVKEMYNTYKNNVGGL 401
Query: 421 LGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLY 480
+G KRE WLQLRAE+EALTD WLT +LKAL+LI+SR NCVN+LVTTTQLIPALAKVLLY
Sbjct: 402 IGTPKRETWLQLRAELEALTDLWLTHSLKALNLINSRPNCVNVLVTTTQLIPALAKVLLY 461
Query: 481 GLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRIS 540
GLG VFPIENIYSATK GKESCFERI+QRFGRK VYVVIGDGVEEEQGAKKH MPFWRIS
Sbjct: 462 GLGSVFPIENIYSATKTGKESCFERIMQRFGRKAVYVVIGDGVEEEQGAKKHNMPFWRIS 521
Query: 541 SHSDLMALHHALELEYL 557
H+DL AL HALELEYL
Sbjct: 522 CHADLEALRHALELEYL 538
>gi|26667230 eyes absent 2 isoform c [Homo sapiens]
Length = 514
Score = 581 bits (1498), Expect = e-166
Identities = 298/497 (59%), Positives = 350/497 (70%), Gaps = 63/497 (12%)
Query: 91 NRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQS 150
+R P +LP S MAAYGQTQ++ G+QQAT Y YP P Q YGI S
Sbjct: 51 SRSCPRVLPRQPSTAMAAYGQTQYSAGIQQATPYTAYPPPAQAYGIPS------------ 98
Query: 151 QSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDY 210
FST GQ+PY+YQM G++ G Y G N L N++GF S QDY
Sbjct: 99 --------------FSTSPTGQSPYTYQMHGTT-----GFYQGGNGLGNAAGFGSVHQDY 139
Query: 211 PSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTA 270
PSYP F Q QY QYY SS Y Y+ +S+ P+ P + +TY LQE + +Q+
Sbjct: 140 PSYPGFPQSQYPQYYGSS-YNPPYVPASSICPS-PLSTSTYVLQEASHNVPNQSSESLAG 197
Query: 271 EYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIV 330
EY+T + PSTP K+ D+DR R SDGK RGR +R+++PSP D+++ERVF+WDLDETII+
Sbjct: 198 EYNTHNGPSTPAKEGDTDRPHRASDGKLRGRSKRSSDPSPAGDNEIERVFVWDLDETIII 257
Query: 331 FHSLLTGSYANRYGR------------------------------ECDQVHIDDVSSDDN 360
FHSLLTG++A+RYG+ +CDQ+H+DDVSSDDN
Sbjct: 258 FHSLLTGTFASRYGKDTTTSVRIGLMMEEMIFNLADTHLFFNDLEDCDQIHVDDVSSDDN 317
Query: 361 GQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGL 420
GQDLSTYNF DGF ++A ANLCL +GV GGVDWMRKLAFRYRRVKE+YNTYKNNVGGL
Sbjct: 318 GQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLAFRYRRVKEMYNTYKNNVGGL 377
Query: 421 LGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLY 480
+G KRE WLQLRAE+EALTD WLT +LKAL+LI+SR NCVN+LVTTTQLIPALAKVLLY
Sbjct: 378 IGTPKRETWLQLRAELEALTDLWLTHSLKALNLINSRPNCVNVLVTTTQLIPALAKVLLY 437
Query: 481 GLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRIS 540
GLG VFPIENIYSATK GKESCFERI+QRFGRK VYVVIGDGVEEEQGAKKH MPFWRIS
Sbjct: 438 GLGSVFPIENIYSATKTGKESCFERIMQRFGRKAVYVVIGDGVEEEQGAKKHNMPFWRIS 497
Query: 541 SHSDLMALHHALELEYL 557
H+DL AL HALELEYL
Sbjct: 498 CHADLEALRHALELEYL 514
>gi|26667243 eyes absent 3 [Homo sapiens]
Length = 573
Score = 474 bits (1221), Expect = e-134
Identities = 271/557 (48%), Positives = 358/557 (64%), Gaps = 55/557 (9%)
Query: 44 TEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSS 103
+ P S + T++ S S + + + PR ++ ++ Q+Y S +PY HIL P S
Sbjct: 29 SNPDVSDQKPETSSLASNLPMSEEIMTCTDYIPRSSNDYTS-QMY-SAKPYAHILSVPVS 86
Query: 104 QTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYG-----IKTEGGLSQSQSPGQTGF 158
+T A GQTQ+ T +QQ YA YPQ Q YG+ +G +K E GL Q+ SP Q
Sbjct: 87 ET-AYPGQTQYQT-LQQTQPYAVYPQATQTYGLPPFGALWPGMKPESGLIQTPSPSQHSV 144
Query: 159 LSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTN---SSGFNSSQQDYPSYPS 215
L+ T +T QP A YSY +Q SS T++ + + ++++ N ++ + S QDYP+Y
Sbjct: 145 LTCTTGLTTSQPSPAHYSYPIQASS--TNASLISTSSTIANIPAAAVASISNQDYPTYTI 202
Query: 216 FGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVT-----DPTA 270
GQ QY Y SS + T+S+ TT + TYQ ++P + A DP+
Sbjct: 203 LGQNQYQACYPSSSFGVTGQTNSDAESTTLAAT-TYQSEKPSVMAPAPAAQRLSSGDPST 261
Query: 271 EYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIV 330
S S +TP KD+D D+ R+ K+RG+ R + + DS+LERVF+WDLDETII+
Sbjct: 262 SPSL--SQTTPSKDTD-DQSRKNMTSKNRGK--RKADATSSQDSELERVFLWDLDETIII 316
Query: 331 FHSLLTGSYANRYGR------------------------------ECDQVHIDDVSSDDN 360
FHSLLTGSYA +YG+ ECDQVH++DV+SDDN
Sbjct: 317 FHSLLTGSYAQKYGKDPTVVIGSGLTMEEMIFEVADTHLFFNDLEECDQVHVEDVASDDN 376
Query: 361 GQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGL 420
GQDLS Y+F TDGF + S + + GV+GGVDWMRKLAFRYR+V+EIY+ +K+NVGGL
Sbjct: 377 GQDLSNYSFSTDGFSGSGGSGSHGSSVGVQGGVDWMRKLAFRYRKVREIYDKHKSNVGGL 436
Query: 421 LGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLY 480
L P ++EA +LRAEIE LTDSWL ALK+L LI SR NCVN+L+TTTQL+PALAKVLLY
Sbjct: 437 LSPQRKEALQRLRAEIEVLTDSWLGTALKSLLLIQSRKNCVNVLITTTQLVPALAKVLLY 496
Query: 481 GLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRIS 540
GLG +FPIENIYSATKIGKESCFERI+ RFG+KV YVVIGDG +EE AK+H MPFWRI+
Sbjct: 497 GLGEIFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEIAAKQHNMPFWRIT 556
Query: 541 SHSDLMALHHALELEYL 557
+H DL++LH ALEL++L
Sbjct: 557 NHGDLVSLHQALELDFL 573
>gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo
sapiens]
Length = 354
Score = 56.2 bits (134), Expect = 8e-08
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 103 SQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYG 162
SQ A G + +T Q A T Q YG +YG T+ +Q+Q+ G +Y
Sbjct: 10 SQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYG--TYGQPTDVSYTQAQTTATYGQTAYA 67
Query: 163 TSFSTPQPG----QAPYSYQMQGSSFTTSSGIY-TGNNSLTNSSGFNSSQQDY---PSYP 214
TS+ P G AP +Y + T G Y T ++T + ++Q Y P+YP
Sbjct: 68 TSYGQPPTGYTTPTAPQAYSQPVQGYGT--GAYDTTTATVTTTQASYAAQSAYGTQPAYP 125
Query: 215 SFGQGQYAQYYNSSPYPAHYMTSSN---------TSPTTPSTNATYQLQEPPSGITSQAV 265
++GQ Q A + P + T ++ P+ + Y + P Q V
Sbjct: 126 AYGQ-QPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPV 184
Query: 266 TDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNN 306
T P + T +S + P S ++ + G+ G++++
Sbjct: 185 TAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSS 225
Score = 30.4 bits (67), Expect = 4.5
Identities = 49/201 (24%), Positives = 70/201 (34%), Gaps = 31/201 (15%)
Query: 5 DLTSPHSRLSGSSESPSGPKLGNSHIN--------SNSMTPNGTEVKTEPMSSSETASTT 56
+ + P S G ++ P LG N S M P P S S T T+
Sbjct: 147 ETSQPQSSTGGYNQ----PSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202
Query: 57 ADGSL---NNFSG--SAIGS-SSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYG 110
D S N G S+ G SS+ + ++ PP YP P+ SQ ++YG
Sbjct: 203 YDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYG 262
Query: 111 QTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSP-----GQTGFLSYGTSF 165
QQ++ +P YG S G G P G+ GF G S
Sbjct: 263 --------QQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSR 314
Query: 166 STPQPGQAPYSYQMQGSSFTT 186
G+ Q + +T+
Sbjct: 315 GGRGGGRGGMGLQSESLVYTS 335
>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
sapiens]
Length = 655
Score = 56.2 bits (134), Expect = 8e-08
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 103 SQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYG 162
SQ A G + +T Q A T Q YG +YG T+ +Q+Q+ G +Y
Sbjct: 10 SQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYG--TYGQPTDVSYTQAQTTATYGQTAYA 67
Query: 163 TSFSTPQPG----QAPYSYQMQGSSFTTSSGIY-TGNNSLTNSSGFNSSQQDY---PSYP 214
TS+ P G AP +Y + T G Y T ++T + ++Q Y P+YP
Sbjct: 68 TSYGQPPTGYTTPTAPQAYSQPVQGYGT--GAYDTTTATVTTTQASYAAQSAYGTQPAYP 125
Query: 215 SFGQGQYAQYYNSSPYPAHYMTSSN---------TSPTTPSTNATYQLQEPPSGITSQAV 265
++GQ Q A + P + T ++ P+ + Y + P Q V
Sbjct: 126 AYGQ-QPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPV 184
Query: 266 TDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNN 306
T P + T +S + P S ++ + G+ G++++
Sbjct: 185 TAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSS 225
Score = 30.0 bits (66), Expect = 5.8
Identities = 42/167 (25%), Positives = 58/167 (34%), Gaps = 26/167 (15%)
Query: 5 DLTSPHSRLSGSSESPSGPKLGNSHIN--------SNSMTPNGTEVKTEPMSSSETASTT 56
+ + P S G ++ P LG N S M P P S S T T+
Sbjct: 147 ETSQPQSSTGGYNQ----PSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202
Query: 57 ADGSL---NNFSG--SAIGS-SSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYG 110
D S N G S+ G SS+ + ++ PP YP P+ SQ ++YG
Sbjct: 203 YDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYG 262
Query: 111 QTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTG 157
QQ++ +P YG S G G P G
Sbjct: 263 --------QQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRG 301
>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
sapiens]
Length = 656
Score = 56.2 bits (134), Expect = 8e-08
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 103 SQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYG 162
SQ A G + +T Q A T Q YG +YG T+ +Q+Q+ G +Y
Sbjct: 10 SQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYG--TYGQPTDVSYTQAQTTATYGQTAYA 67
Query: 163 TSFSTPQPG----QAPYSYQMQGSSFTTSSGIY-TGNNSLTNSSGFNSSQQDY---PSYP 214
TS+ P G AP +Y + T G Y T ++T + ++Q Y P+YP
Sbjct: 68 TSYGQPPTGYTTPTAPQAYSQPVQGYGT--GAYDTTTATVTTTQASYAAQSAYGTQPAYP 125
Query: 215 SFGQGQYAQYYNSSPYPAHYMTSSN---------TSPTTPSTNATYQLQEPPSGITSQAV 265
++GQ Q A + P + T ++ P+ + Y + P Q V
Sbjct: 126 AYGQ-QPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPV 184
Query: 266 TDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNN 306
T P + T +S + P S ++ + G+ G++++
Sbjct: 185 TAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSS 225
Score = 30.8 bits (68), Expect = 3.4
Identities = 61/253 (24%), Positives = 82/253 (32%), Gaps = 40/253 (15%)
Query: 5 DLTSPHSRLSGSSESPSGPKLGNSHIN--------SNSMTPNGTEVKTEPMSSSETASTT 56
+ + P S G ++ P LG N S M P P S S T T+
Sbjct: 147 ETSQPQSSTGGYNQ----PSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202
Query: 57 ADGSL---NNFSG--SAIGS-SSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYG 110
D S N G S+ G SS+ + ++ PP YP P+ SQ ++YG
Sbjct: 203 YDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYG 262
Query: 111 QTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQP 170
QQ++ +P YG S GG S PG+ +S
Sbjct: 263 --------QQSSFRQDHPSSMGVYGQES------GGFS---GPGENRSMS-----GPDNR 300
Query: 171 GQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPY 230
G+ + G S G G S GFN P G S
Sbjct: 301 GRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN 360
Query: 231 PAHYMTSSNTSPT 243
A Y+ N S T
Sbjct: 361 SAIYVQGLNDSVT 373
>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
sapiens]
Length = 600
Score = 54.3 bits (129), Expect = 3e-07
Identities = 63/244 (25%), Positives = 94/244 (38%), Gaps = 48/244 (19%)
Query: 103 SQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYG 162
SQ A G + +T Q A T Q YG +YG T+ +Q+Q+ G +Y
Sbjct: 10 SQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYG--TYGQPTDVSYTQAQTTATYGQTAYA 67
Query: 163 TSFSTPQPG----QAPYSYQMQGSSFTTSSGIY-TGNNSLTNSSGFNSSQQDY---PSYP 214
TS+ P G AP +Y + T G Y T ++T + ++Q Y P+YP
Sbjct: 68 TSYGQPPTGYTTPTAPQAYSQPVQGYGT--GAYDTTTATVTTTQASYAAQSAYGTQPAYP 125
Query: 215 SFGQ--GQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQE----------------- 255
++GQ A SS P Y SS + T ++Y Q
Sbjct: 126 AYGQQPAATAPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYP 185
Query: 256 PPSGITSQAVTDPTAEYSTIHSPSTPIKDSDS-----------------DRLRRGSDGKS 298
P +G SQA + + + S+ S+ +D S +R G D +
Sbjct: 186 PQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRG 245
Query: 299 RGRG 302
RGRG
Sbjct: 246 RGRG 249
Score = 30.8 bits (68), Expect = 3.4
Identities = 52/206 (25%), Positives = 69/206 (33%), Gaps = 28/206 (13%)
Query: 44 TEPMSSSETASTTADGSL---NNFSG--SAIGS-SSFSPRPTHQFSPPQIYPSNRPYPHI 97
T P S S T T+ D S N G S+ G SS+ + ++ PP YP
Sbjct: 134 TAPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQ 193
Query: 98 LPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTG 157
P+ SQ ++YG QQ++ +P YG S GG S PG+
Sbjct: 194 APSQYSQQSSSYG--------QQSSFRQDHPSSMGVYGQES------GGFS---GPGENR 236
Query: 158 FLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFG 217
+S G+ + G S G G S GFN P
Sbjct: 237 SMS-----GPDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLD 291
Query: 218 QGQYAQYYNSSPYPAHYMTSSNTSPT 243
G S A Y+ N S T
Sbjct: 292 LGPPVDPDEDSDNSAIYVQGLNDSVT 317
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 52.8 bits (125), Expect = 8e-07
Identities = 76/335 (22%), Positives = 123/335 (36%), Gaps = 28/335 (8%)
Query: 7 TSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSG 66
TSP + S SP+ P + + + +P+ + +S + S T+
Sbjct: 1639 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1698
Query: 67 SAIGSSSFSPR-PTHQFSPPQIYPSNRPYPHILPT--PSSQTMAAYGQTQFTTGMQQATA 123
+ S S+SP P++ + P P++ Y P+ P+S + + T
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 124 YATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYS--YQMQG 181
+Y Y +S S + SP + S+S P +P S Y Q
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPT---SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 182 SSFTTSSGIYTGNN---SLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPY-----PAH 233
++T SS Y+ ++ S T+ +S PS P + +Y +SP P +
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSPTSPKYSPTSPKY 1874
Query: 234 YMTSSNTSPTTPS---TNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRL 290
TS SPTTP T+ TY P TS + + YS +P + S
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query: 291 RRGSDGKSRGRGRRNNNPS--------PPPDSDLE 317
+GS G +P+ P DSD E
Sbjct: 1935 PKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEE 1969
Score = 47.0 bits (110), Expect = 5e-05
Identities = 70/283 (24%), Positives = 99/283 (34%), Gaps = 21/283 (7%)
Query: 9 PHSRLSGSSESPSGPKLGNSHINSNSMTP-NGTEVKTEPMSSSETASTTADGSLNNFSGS 67
P GS+ SP G S +MTP N S S G+ +
Sbjct: 1498 PTGMFFGSAPSPMGGI-------SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSA 1550
Query: 68 AIGSSSFSPRPTHQFSPPQIYP-SNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYAT 126
A +S FSP + +SP P S P +P+P +Y T + Y T
Sbjct: 1551 ASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGY-T 1609
Query: 127 YPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYS--YQMQGSSF 184
P SY S S SP + S+S P +P S Y S+
Sbjct: 1610 PQSPSYSPTSPSYS-----PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1664
Query: 185 TTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTT 244
+ +S Y S T+ S +S P+ PS+ + S Y + S TSP+
Sbjct: 1665 SPTSPSY----SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 245 PSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDS 287
T+ +Y P TS + + + YS TP S S
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYS 1763
Score = 44.7 bits (104), Expect = 2e-04
Identities = 62/237 (26%), Positives = 92/237 (38%), Gaps = 18/237 (7%)
Query: 57 ADGSLNNFSGSA---IGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSS---QTMAAYG 110
A G F GSA +G S + P +Q + P Y + P TP + AA
Sbjct: 1495 AAGPTGMFFGSAPSPMGGISPAMTPWNQGATPA-YGAWSPSVGSGMTPGAAGFSPSAASD 1553
Query: 111 QTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQP 170
+ F+ G A + T PG P S Y G +S S SP + TPQ
Sbjct: 1554 ASGFSPGYSPAWS-PTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQS 1612
Query: 171 GQAPYSYQMQGSSFTTSSGIY--TGNNSLTNSSGFNSSQQDY-PSYPSFGQGQYAQYYNS 227
SY S++ +S Y T N S ++ + Y P+ PS+ + S
Sbjct: 1613 P----SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 228 SPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTI---HSPSTP 281
Y + S TSP+ T+ +Y P TS + + + YS +SP++P
Sbjct: 1669 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 52.4 bits (124), Expect = 1e-06
Identities = 73/310 (23%), Positives = 124/310 (40%), Gaps = 27/310 (8%)
Query: 7 TSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSG 66
TS + + +SES + ++ NS+S T T ++S++++T+++ S S
Sbjct: 113 TSSGASTATNSESSTPSSGASTATNSDSST---TSSGASTATNSDSSTTSSEASTATNSE 169
Query: 67 SAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFT----------- 115
S+ SS S + S S T S + A +++ T
Sbjct: 170 SSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSE 229
Query: 116 -----TGMQQAT-AYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQ 169
+G AT + ++ P G +S T G + + ++ +S G S T
Sbjct: 230 SSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATN-SESSTVSSGISTVTNS 288
Query: 170 PGQAPYS---YQMQGSSFTTSSGIYTGNN--SLTNSSGFNSSQQDYPSYPSFGQGQYAQY 224
P S S TTSSG T N S T SSG +++ S S G A
Sbjct: 289 ESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSG-ASTATN 347
Query: 225 YNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKD 284
SS + T++N+ +T S+ + S ++S A T T+E ST S ++ +
Sbjct: 348 SESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATN 407
Query: 285 SDSDRLRRGS 294
S+S + G+
Sbjct: 408 SESSTVSSGA 417
Score = 51.6 bits (122), Expect = 2e-06
Identities = 67/289 (23%), Positives = 111/289 (38%), Gaps = 12/289 (4%)
Query: 13 LSGSSESPSGPKLGNSHINSNSMTPN-----GTEVKTEPMSSSETASTTADGSLNNFSGS 67
++ +SES + ++ NS S TP+ T + SS + +T +D S + S
Sbjct: 104 IATNSESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEAS 163
Query: 68 AIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATY 127
+S S + + S T S + + G + T + T+
Sbjct: 164 TATNSESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAG 223
Query: 128 PQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTS 187
+S G T S+S +P + + ST G + S T S
Sbjct: 224 TATNSESSTTSSGASTATN-SESSTPSSGAGTATNSESSTTSSGAGTAT---NSESSTVS 279
Query: 188 SGIYTGNN--SLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTP 245
SGI T N S T SSG N++ S S G A +SS + T++N+ +T
Sbjct: 280 SGISTVTNSESSTPSSGANTATNSESSTTSSG-ANTATNSDSSTTSSGASTATNSESSTT 338
Query: 246 STNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGS 294
S+ A+ S +S A T + ST S ++ +S+S + G+
Sbjct: 339 SSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGA 387
Score = 48.9 bits (115), Expect = 1e-05
Identities = 64/289 (22%), Positives = 118/289 (40%), Gaps = 19/289 (6%)
Query: 14 SGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSGSAIGSSS 73
+ S+E+ + G+S I+S + T ++S ++ T++ S SGS++ S+
Sbjct: 22 TNSNETSTSANTGSSVISSGASTA----------TNSGSSVTSSGVSTATISGSSVTSNG 71
Query: 74 FSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTT-GMQQAT-AYATYPQPG 131
S +F S S ++A ++ T+ G AT + ++ P G
Sbjct: 72 VSIVTNSEFHTTSSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNSESSTPSSG 131
Query: 132 QPYGISSYGIKTEGGLS-----QSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTT 186
+S T G S S + + + ST G A + + S+ ++
Sbjct: 132 ASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSG-ASTATNSESSTVSS 190
Query: 187 SSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPS 246
+ T + S T SSG +++ S G G A SS + T++N+ +TPS
Sbjct: 191 RASTATNSESSTTSSGASTATNSESRTTSNGAGT-ATNSESSTTSSGASTATNSESSTPS 249
Query: 247 TNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSD 295
+ A S +S A T +E ST+ S + + +S+S G++
Sbjct: 250 SGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGAN 298
Score = 47.0 bits (110), Expect = 5e-05
Identities = 77/340 (22%), Positives = 127/340 (37%), Gaps = 38/340 (11%)
Query: 14 SGSSESPSGPKLGNSHINSNSMTPNGTEVKTEP-----------MSSSETASTTADGSLN 62
SGSS + SG + + I+ +S+T NG + T ++SE ++ ++ S+
Sbjct: 48 SGSSVTSSG--VSTATISGSSVTSNGVSIVTNSEFHTTSSGISTATNSEFSTVSSGISIA 105
Query: 63 NFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQAT 122
S S+ SS S + S P S T S + A + TT + +T
Sbjct: 106 TNSESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSS-TTSSEAST 164
Query: 123 AY-------------ATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQ 169
A AT + +S +E + S + T S TS
Sbjct: 165 ATNSESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAGT 224
Query: 170 PGQAPYSYQMQGSSFTTSS---------GIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQ 220
+ S G+S T+S G T + S T SSG ++ S S G
Sbjct: 225 ATNSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGIST 284
Query: 221 YAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPST 280
+S+P + T++N+ +T S+ A S +S A T +E ST S ++
Sbjct: 285 VTNSESSTP-SSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGAS 343
Query: 281 PIKDSDSDRLRRG-SDGKSRGRGRRNNNPSPPPDSDLERV 319
+S+S G S + G ++ S +S+ V
Sbjct: 344 TATNSESSTTSSGASTATNSGSSTTSSGTSTATNSESSTV 383
Score = 38.1 bits (87), Expect = 0.021
Identities = 60/235 (25%), Positives = 89/235 (37%), Gaps = 20/235 (8%)
Query: 7 TSPHSRLSGSSESPSGPKLGNSHINSNSMTPN---GTEVKTEPMSSSETASTTADGSLNN 63
TS + + +SES + ++ NS S TP+ GT +E ++S A T + +
Sbjct: 218 TSNGAGTATNSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESST 277
Query: 64 FS-GSAIGSSSFSPRP-------THQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFT 115
S G + ++S S P T+ S +N T SS A T
Sbjct: 278 VSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESST 337
Query: 116 TGMQQATAY---ATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQ 172
T +TA ++ G +S T G S + + ++ +S G S +T
Sbjct: 338 TSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTATN-SESSTVSSGASTATTSESS 396
Query: 173 APYS---YQMQGSSFTTSSGIYTGNNS--LTNSSGFNSSQQDYPSYPSFGQGQYA 222
S S T SSG T NS T SSG N++ S S G G A
Sbjct: 397 TTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGSSVTSAGSGTAA 451
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 52.0 bits (123), Expect = 1e-06
Identities = 74/302 (24%), Positives = 118/302 (39%), Gaps = 37/302 (12%)
Query: 33 NSMTPNGTEVKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIY-PSN 91
NS+ P+G + +SS + AS TA +A+ S+ P + QFS P + PS
Sbjct: 1170 NSLKPSGPTPASGQLSSGDKASGTAKIE------TAVTST---PSASGQFSKPFSFSPSG 1220
Query: 92 RPYPH--ILPTPSSQTMAAYGQT----------QFTTGMQQATAYATYPQPGQPYGISSY 139
+ I PTPSS AA G T F++G +Y P+ P GI+S
Sbjct: 1221 TGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSA 1280
Query: 140 GIKTEGGLSQSQS----PGQTGFLSYGTSFSTP--QPGQAPYSYQMQGSSFTTSSGIYTG 193
T G + S S P T + + TP + G+ + + G + + SG+ G
Sbjct: 1281 SNTTPGEPAASSSRPVAPSGTALSTTSSKLETPPSKLGELLFPSSLAGETLGSFSGLRVG 1340
Query: 194 N-NSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQ 252
+ T + SS + P+ G + + ++P + +T P P T++
Sbjct: 1341 QADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAP----PVLGKHTEP--PVTSSATT 1394
Query: 253 LQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNN--PSP 310
P TS + T + S+ + L G S G + N+ PS
Sbjct: 1395 TSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSA 1454
Query: 311 PP 312
PP
Sbjct: 1455 PP 1456
Score = 37.4 bits (85), Expect = 0.036
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 24/207 (11%)
Query: 33 NSMTPNGTEVKTEPMSSSETASTTADGSLNN--FSGSAIGSSSFSPRPTHQFSPP--QIY 88
+S P E + P++SS T+ S F GSS F+ P S Q+
Sbjct: 1602 SSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLT 1661
Query: 89 PSNRPYPHILPT----PSSQTMAAYGQTQFTTGMQQATAYATYPQPGQP------YGISS 138
+ P P +S + +GQ TG +TA AT PQ +G ++
Sbjct: 1662 NNTATAPSATPVFGQVAASTAPSLFGQQ---TGSTASTAAAT-PQVSSSGFSSPAFGTTA 1717
Query: 139 YGIKTEGGLSQSQSPGQTGFLSYGT-SFSTPQPGQAPYSYQMQGSSFTTSSG-IYTGNNS 196
G+ + Q+ GQ+ + SFS P P Q S+ T++SG ++ +S
Sbjct: 1718 PGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAASS 1777
Query: 197 LTNSSGFNSSQQDYPSYPSFGQGQYAQ 223
++SS F+ Q S P+ G G + Q
Sbjct: 1778 TSSSSSFSFGQ----SSPNTGGGLFGQ 1800
Score = 30.4 bits (67), Expect = 4.5
Identities = 55/222 (24%), Positives = 80/222 (36%), Gaps = 40/222 (18%)
Query: 48 SSSETASTTADGSLNNFSGSAIGSSSFSPRP---THQFSPPQIYPSNRPYPHILPTPSSQ 104
SSS +S T G ++S S SS +P P T F PP S P P P S
Sbjct: 486 SSSLKSSATVTGEPPSYS-SGSDSSKAAPGPGPSTFSFVPPS-KASLAPTPAASPVAPSA 543
Query: 105 TMAAYGQTQF-----TTGMQQATAYATYPQPGQPYGISSYGIK---------TEGGLSQS 150
++G + F +T + +A +P P S+ + T +S S
Sbjct: 544 ASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTAAATSTPVSSS 603
Query: 151 QS------------PGQTGFLSYGTSFSTPQPG--------QAPYSYQMQGSSFTTSSGI 190
QS P +G LS+ T S P +P QGSS S +
Sbjct: 604 QSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMV 663
Query: 191 YTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPA 232
+ +T + S Q P+ + Q Q+ +S P A
Sbjct: 664 QK-SPRITPPAAKPGSPQAKSLQPAVAEKQGHQWKDSDPVMA 704
>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
sapiens]
Length = 661
Score = 51.6 bits (122), Expect = 2e-06
Identities = 53/227 (23%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 103 SQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYG 162
SQ A G + +T Q A T Q YG +YG T+ +Q+Q+ G +Y
Sbjct: 10 SQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYG--TYGQPTDVSYTQAQTTATYGQTAYA 67
Query: 163 TSFSTPQPGQ----------APYSYQMQGSSFTTSSGIY-TGNNSLTNSSGFNSSQQDY- 210
TS+ P + AP +Y + T G Y T ++T + ++Q Y
Sbjct: 68 TSYGQPPTVEGTSTGYTTPTAPQAYSQPVQGYGT--GAYDTTTATVTTTQASYAAQSAYG 125
Query: 211 --PSYPSFGQGQYAQYYNSSPYPAHYMTSSN---------TSPTTPSTNATYQLQEPPSG 259
P+YP++GQ Q A + P + T ++ P+ + Y + P
Sbjct: 126 TQPAYPAYGQ-QPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGS 184
Query: 260 ITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNN 306
Q VT P + T +S + P S ++ + G+ G++++
Sbjct: 185 YPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSS 231
Score = 30.0 bits (66), Expect = 5.8
Identities = 42/167 (25%), Positives = 58/167 (34%), Gaps = 26/167 (15%)
Query: 5 DLTSPHSRLSGSSESPSGPKLGNSHIN--------SNSMTPNGTEVKTEPMSSSETASTT 56
+ + P S G ++ P LG N S M P P S S T T+
Sbjct: 153 ETSQPQSSTGGYNQ----PSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 208
Query: 57 ADGSL---NNFSG--SAIGS-SSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYG 110
D S N G S+ G SS+ + ++ PP YP P+ SQ ++YG
Sbjct: 209 YDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYG 268
Query: 111 QTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTG 157
QQ++ +P YG S G G P G
Sbjct: 269 --------QQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRG 307
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 51.2 bits (121), Expect = 2e-06
Identities = 57/193 (29%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 119 QQAT-AYATYP-QPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYS 176
QQAT +Y YP QPGQ Y S SQ GQ + Y S T GQ+ S
Sbjct: 8 QQATQSYGAYPTQPGQGYSQQS-----------SQPYGQQSYSGYSQSTDTSGYGQS--S 54
Query: 177 YQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQY--YNSSPYPAHY 234
Y G S T G + ++ G+ SSQ SY GQ + Y Y P P
Sbjct: 55 YSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSY-----GQQSSYPGYGQQPAP--- 106
Query: 235 MTSSNTSPTTPSTNATYQLQEPPSGITSQ--AVTDPTAEYSTIHSPSTPIKDSDSDRLRR 292
S+TS + S++ + +P SG SQ + Y S + P ++
Sbjct: 107 ---SSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNS 163
Query: 293 GSDGKSRGRGRRN 305
S G G G N
Sbjct: 164 SSGGGGGGGGGGN 176
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/172 (30%), Positives = 68/172 (39%), Gaps = 32/172 (18%)
Query: 71 SSSFSPRPTHQFSPPQIYP--SNRPYPHILPTPSSQTM--AAYGQTQFTT-GMQQATAYA 125
+ S+ PT P Q Y S++PY + SQ+ + YGQ+ +++ G Q T Y
Sbjct: 11 TQSYGAYPTQ---PGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYG 67
Query: 126 TYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAP--------YSY 177
T P Q YG + GG SQS SYG S P GQ P Y
Sbjct: 68 TQSTP-QGYG-------STGGYGSSQSSQS----SYGQQSSYPGYGQQPAPSSTSGSYGS 115
Query: 178 QMQGSSF-TTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSS 228
Q SS+ SG Y+ S QQ Y +GQ YNSS
Sbjct: 116 SSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQ---QNQYNSS 164
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 50.8 bits (120), Expect = 3e-06
Identities = 78/299 (26%), Positives = 121/299 (40%), Gaps = 37/299 (12%)
Query: 14 SGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETA-------STTADGSLNNFSG 66
S ++ S + G H+++ + TP T K P SS TA ST + +F
Sbjct: 4265 STATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSF-- 4322
Query: 67 SAIGSSSFSPRPTH--QFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTT--GMQQAT 122
+AI SSS T Q + P S TPSS A+ T TT +AT
Sbjct: 4323 TAIPSSSLGTTWTRLSQTTTPTATMST-------ATPSSTPETAHTSTVLTTTATTTRAT 4375
Query: 123 AYATYPQ--PGQPYGISSYGIKTEG-GLSQSQSPGQ--------TGFLSYGTSFSTPQPG 171
P PG + T G ++ S SPG + + TS ST P
Sbjct: 4376 GSVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPS 4435
Query: 172 QAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYP 231
P + TT++ + TG+ + +SS S P P+ + + + SP
Sbjct: 4436 SVPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGR--SLSPSS 4493
Query: 232 AHYMTSSNTSPTTPSTNATYQLQEPPSGIT-SQAVTDPTAEYST--IHSPSTPIKDSDS 287
H + ++ TS T+ T T + EP +G + + A T T ++ST + SP + ++S
Sbjct: 4494 PHTVRTAWTSATS-GTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTES 4551
Score = 47.8 bits (112), Expect = 3e-05
Identities = 77/299 (25%), Positives = 117/299 (39%), Gaps = 37/299 (12%)
Query: 14 SGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETA-------STTADGSLNNFSG 66
S ++ S + G H+++ + TP T K P SS TA ST + +F
Sbjct: 3118 STATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSF-- 3175
Query: 67 SAIGSSSFSPRPTH--QFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQ--AT 122
+AI SSS T Q + P S TPSS + T TT AT
Sbjct: 3176 TAIPSSSLGTTWTRLSQTTTPTATMST-------ATPSSTPETVHTSTVLTTTATTTGAT 3228
Query: 123 AYATYPQ--PGQPYGISSYGIKTEG-GLSQSQSPGQTGFL--------SYGTSFSTPQPG 171
P PG + T G + S SPG L + T ST P
Sbjct: 3229 GSVATPSSTPGTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPS 3288
Query: 172 QAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYP 231
P + TT++ + TG+ + +SS S P P+ + + + SP
Sbjct: 3289 SIPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGR--SLSPSS 3346
Query: 232 AHYMTSSNTSPTTPSTNATYQLQEPPSGIT-SQAVTDPTAEYST--IHSPSTPIKDSDS 287
H + ++ TS T+ T T + EP +G + + A T T ++ST + SP + ++S
Sbjct: 3347 PHTVRTAWTSATS-GTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTES 3404
Score = 43.9 bits (102), Expect = 4e-04
Identities = 63/272 (23%), Positives = 99/272 (36%), Gaps = 12/272 (4%)
Query: 11 SRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSS-SETASTTADGSLNNFSGSAI 69
+R + S+ +PS G + I + T T T P ++ S T TT L + +A
Sbjct: 4846 TRATSSTSTPSSTP-GTTWILTELTTAATTTAATGPTATPSSTPGTT--WILTELTTTAT 4902
Query: 70 GSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQ 129
++S T +P + P T + + A TQ T G + AT P
Sbjct: 4903 TTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPT 4962
Query: 130 PGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSG 189
S T L +S T TSF+ ++ + T ++
Sbjct: 4963 VTSSKATPSSSPGTATALPALRSTATT---PTATSFTAIPSSSLGTTWTRLSQTTTPTAT 5019
Query: 190 IYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNA 249
+ T S T + S+ + + G A +S+P AH + PTT +T
Sbjct: 5020 MSTATPSSTPETVHTSTVLTATATTTGATGSVATP-SSTPGTAH----TTKVPTTTTTGF 5074
Query: 250 TYQLQEPPSGITSQAVTDPTAEYSTIHSPSTP 281
T P + T P + STIH+ STP
Sbjct: 5075 TATPSSSPGTALTPPTTTPMSTMSTIHTSSTP 5106
Score = 40.0 bits (92), Expect = 0.006
Identities = 65/287 (22%), Positives = 106/287 (36%), Gaps = 27/287 (9%)
Query: 30 INSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYP 89
+ S + TP T V P SS TA T + + + + S +P H +
Sbjct: 3808 LRSTATTPTATSVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTT 3867
Query: 90 SNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQ 149
+ + TPSS A+ TT + T P G + + +S
Sbjct: 3868 TTTRATGSVATPSSTPGTAH-----TTKVPTTTTTGFTATPSSSPGTA---LTPPVWIST 3919
Query: 150 SQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQD 209
+ +P G ST P P + TT++ + TG+ + +SS S
Sbjct: 3920 TTTPTTRG--------STVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTTH 3971
Query: 210 YPSYPSFGQGQYAQYY-NSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQ--AVT 266
P P+ + + SSP+ +S TS +T+ T PS +TS A T
Sbjct: 3972 TPPVPNTTATTHGRSLPPSSPHTVRTAWTSATSGILGTTHIT-----EPSTVTSHTPAAT 4026
Query: 267 DPTAEYST--IHSPSTPIKDSDS-DRLRRGSDGKSRGRGRRNNNPSP 310
T ++ST + SP + ++S + G +RG R +P
Sbjct: 4027 TSTTQHSTPALSSPHPSSRTTESPPSPGTTTPGHTRGTSRTTATATP 4073
Score = 38.1 bits (87), Expect = 0.021
Identities = 70/279 (25%), Positives = 109/279 (39%), Gaps = 45/279 (16%)
Query: 17 SESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSP 76
S PS P S + S TP T + T+P + TA+TTA + GS++
Sbjct: 2576 SHCPSTP--ATSSTATPSSTPGTTWILTKP---TTTATTTA----------STGSTATPT 2620
Query: 77 RPTHQFSPPQIYPSNRPYPHIL---PTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQP 133
PP++ + P + TPSS A + TA + P P
Sbjct: 2621 STLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSS 2680
Query: 134 YGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTG 193
G T LSQ+ +P T +S T STP+ A S + ++ TT + TG
Sbjct: 2681 LG------TTWTRLSQTTTP--TATMSTATPSSTPE--TAHTSTVLTATATTTGA---TG 2727
Query: 194 NNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPA---HYMTSSNTSPTTPSTNAT 250
+ + +S+ + P+ + G + +SSP A S+ T+PTT + T
Sbjct: 2728 SVATPSSTPGTAHTTKVPTTTTTG---FTATPSSSPGTALTPPVWISTTTTPTTRGSTVT 2784
Query: 251 YQLQEPPSGI--TSQAVTDPTAEYSTIHSPSTPIKDSDS 287
PS I T+ T T +T+ + S S +
Sbjct: 2785 ------PSSIPGTTHTATVLTTTTTTVATGSMATPSSST 2817
Score = 35.0 bits (79), Expect = 0.18
Identities = 61/270 (22%), Positives = 99/270 (36%), Gaps = 39/270 (14%)
Query: 32 SNSMTPNGTEVKTEPMSSSETAST----TADGSLNNFSGSAIGSSSFSPRPTHQFSPPQI 87
S + TP T P S+ ETA T TA + +GS + + S +P H P
Sbjct: 2689 SQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGS-VATPSSTPGTAHTTKVPTT 2747
Query: 88 YPSNRPYPHILPTPSSQTMAAYGQ----TQFTTGMQQATAYATYPQPGQPYGISSYGIKT 143
+ TPSS A + TT + + PG + + T
Sbjct: 2748 TTTG-----FTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTT 2802
Query: 144 EGGLSQSQSPGQTGFLSYGTSFSTPQPGQ---------APYSYQMQGSSFTTSSGIYTGN 194
+ S + + + GT+ + P P P S +++T+++ G
Sbjct: 2803 TTVATGSMATPSSSTQTSGTTHTPPVPNTMATTHGRSLPPSSPHTVRTAWTSATSGILGT 2862
Query: 195 NSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSP--TTPS-TNATY 251
+T S S + + G Q++ SSP+P+ T S SP TTP T AT
Sbjct: 2863 THITEPSTVTS----HTLAATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGHTTATS 2918
Query: 252 QLQEPPSGITSQAVTDPTAEYSTIHSPSTP 281
+ + A P+ ++ PS+P
Sbjct: 2919 R---------TTATATPSKTRTSTLLPSSP 2939
Score = 34.3 bits (77), Expect = 0.31
Identities = 65/268 (24%), Positives = 103/268 (38%), Gaps = 49/268 (18%)
Query: 20 PSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPT 79
PS P S + S TP T + TE +++ T +TT +AI SS+ P
Sbjct: 3555 PSTP--ATSSTATPSSTPGTTWILTEQTTAATTTATT--------GSTAIPSSTPGTAP- 3603
Query: 80 HQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSY 139
PP++ S P T S T ++ +T T + +TA + P I S+
Sbjct: 3604 ----PPKVLTSTATTP--TATSSKATSSSSPRTATTLPVLTSTATKSTATSFTP--IPSF 3655
Query: 140 GIKTEGGL-SQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLT 198
+ T G L Q+ +P T ST P P + T +S + T + T
Sbjct: 3656 TLGTTGTLPEQTTTPMAT--------MSTIHPSSTPET--------THTSTVLTTKATTT 3699
Query: 199 NSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPT-TPST--NATYQLQE 255
++ S+ P + + T++ T PT TPS+ T+ L E
Sbjct: 3700 RATSSMSTPSSTP----------GTTWILTELTTAATTTAATGPTATPSSTPGTTWILTE 3749
Query: 256 PPSGITSQAVTDPTAEYSTIHSPSTPIK 283
P + T T TA S+ + + +K
Sbjct: 3750 PSTTATVTVPTGSTATASSTRATAGTLK 3777
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 50.8 bits (120), Expect = 3e-06
Identities = 72/289 (24%), Positives = 117/289 (40%), Gaps = 28/289 (9%)
Query: 14 SGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSE--TASTTADGSLNNFSGSA-IG 70
S S+ + + ++H + S +G +EP SS T++ TA S + SG+ G
Sbjct: 759 SASTSPDTAAAMTHTH-QAESTEASGQTQTSEPASSGSRTTSAGTATPSSSGASGTTPSG 817
Query: 71 SSSFSPR-PTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATY-- 127
S S T +FS PS + T A++G +TGM + T+
Sbjct: 818 SEGISTSGETTRFSSN---PSRDSHTTQSTTELLSASASHGAIPVSTGMASSIVPGTFHP 874
Query: 128 -----PQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGS 182
G+P G SS S S SP +T +S + + + +
Sbjct: 875 TLSEASTAGRPTGQSS-------PTSPSASPQETAAISRMAQTQRTRTSRGSDTISLASQ 927
Query: 183 SFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQY---AQYYNSSPYPAHYMTSSN 239
+ T S + S+T S+G S Q + + G G+ A N++P P Y +S++
Sbjct: 928 ATDTFSTVPPTPPSIT-STGLTSPQTETHTLSPSGSGKTFTTALISNATPLPVTYASSAS 986
Query: 240 TSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSD 288
T TTP + T T VT P++ ST H+ P+ D+ S+
Sbjct: 987 TGHTTP-LHVTDASSVSTGHATPLPVTSPSS-VSTGHTTPLPVTDTSSE 1033
Score = 35.0 bits (79), Expect = 0.18
Identities = 57/284 (20%), Positives = 115/284 (40%), Gaps = 36/284 (12%)
Query: 14 SGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSGSAIGSSS 73
SG + + S + N+ + ++ + T + + ++E S + G+++ + S + +
Sbjct: 372 SGETTTSSPSSVSNTFLVTSKVFRMPTS-RDSTLGNTEETSLSVSGTISAIT-SKVSTIW 429
Query: 74 FSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAA-YGQTQFTTGMQQA--TAYATYPQP 130
+S + SP + P H + ++T + ++ F+ G+ Q T + T P
Sbjct: 430 WSDTLSTALSPSSLPPKISTAFHTQQSEGAETTGRPHERSSFSPGVSQEIFTLHETTTWP 489
Query: 131 GQPYGISSYGIKTEGGLSQSQSPGQ---------TGFLSYGTSFSTPQPGQAPYSYQMQG 181
SS+ K SQ++ P TG S GT+ + P+ + G
Sbjct: 490 ------SSFSSKGHTTWSQTELPSTSTGAATRLVTGNPSTGTAGTIPRVPSKVSAIGEPG 543
Query: 182 SSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTS 241
T SS + +L ++G + Q + G+ + P++ +T +
Sbjct: 544 EPTTYSSH----STTLPKTTGAGAQTQWTQETGTTGEALLSS-------PSYSVTQMIKT 592
Query: 242 PTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDS 285
T+PS++ + Q T P+ +STIHS ST ++S
Sbjct: 593 ATSPSSSPMLDRHT-----SQQITTAPSTNHSTIHSTSTSPQES 631
Score = 31.6 bits (70), Expect = 2.0
Identities = 70/307 (22%), Positives = 117/307 (38%), Gaps = 52/307 (16%)
Query: 32 SNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSP------P 85
S++ T + T + +SS+ T TT + S S ++ T S P
Sbjct: 3735 SSASTGHATPLPVTGLSSASTGDTTPLPVTDTSSASTRHATPLPVTDTSSASTDDTTRLP 3794
Query: 86 QIYPSNRPYPHILPTP-SSQTMAAYGQTQ---FTTGMQQATAYAT-YPQPGQPYGISSYG 140
S+ H P P +S + A+ G T T +T +AT P + + +
Sbjct: 3795 VTDVSSASTGHATPLPVTSTSSASTGDTTPLPVTDTSSVSTGHATSLPVTSRSSASTGHA 3854
Query: 141 IKTEGGLSQSQSPGQ------TGFLSYGTSFSTPQPGQAPYSYQMQGSS---FTTSSGIY 191
+ S S G T S T +TP P +P S ++ T++S
Sbjct: 3855 TPLPVTDTSSVSTGHATPLPVTSTSSVSTGHATPLPVTSPSSASTGHATPVPVTSTSSAS 3914
Query: 192 TGNNS---LTNSSGFNSSQQD-----YPSYPSFGQ--------GQYAQYYNSSPYPAHYM 235
TG+ + +TN+S ++ PS S G A +++P P +
Sbjct: 3915 TGDTTPLPVTNASSLSTGHATPLHVTSPSSASRGDTSTLPVTDASSASTGHATPLPLTSL 3974
Query: 236 TSSNTSPTTP----STNATYQLQEPPSGITSQA-----------VTDPTAEYSTIHSPST 280
+S +T TTP T++ Q P +TS + VT P++ S+ H+ S
Sbjct: 3975 SSVSTGDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTIPSSA-SSGHTTSL 4033
Query: 281 PIKDSDS 287
P+ D+ S
Sbjct: 4034 PVTDASS 4040
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 50.1 bits (118), Expect = 5e-06
Identities = 64/298 (21%), Positives = 112/298 (37%), Gaps = 33/298 (11%)
Query: 6 LTSPHSRLSGSSESPSGPKLGNSHINS-NSMTPNGTEVKTEPMSSSETASTTADGSLNNF 64
L SPH+ G P GP+ G + S +S+ P + PM ++S+++ + ++
Sbjct: 329 LPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSS 388
Query: 65 SGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAY 124
S S+ SSS SP P Q P YPH P P+S +++ + +
Sbjct: 389 SSSS--SSSASPFPASQALPS--------YPHSFPPPTSLSVSNQPPKYTQPSLPSQAVW 438
Query: 125 ATYPQPGQPYG--ISSYGI------KTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYS 176
+ P P PYG +++ + G S + P T + Q Q
Sbjct: 439 SQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQ 498
Query: 177 YQMQ--GSSFTTSSGIYTGNNSLTNSSGFNS----------SQQDYPSYPSFGQGQYAQY 224
Q Q G+S G + + L S ++ S + YP P+ ++Q
Sbjct: 499 QQQQHHGNSGPPPPGAFP--HPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQV 556
Query: 225 YNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPI 282
S P SS+++ ++ ++ +Y P Q P T+ + S +
Sbjct: 557 SYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATL 614
Score = 43.9 bits (102), Expect = 4e-04
Identities = 72/278 (25%), Positives = 99/278 (35%), Gaps = 81/278 (29%)
Query: 6 LTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFS 65
L PHS++S S P+GP + SSS ++S+T+ GS
Sbjct: 549 LPPPHSQVSYSQAGPNGPPVS---------------------SSSNSSSSTSQGSY---- 583
Query: 66 GSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYA 125
P SP Q P PYP P P+ T +A T T Y
Sbjct: 584 ------------PCSHPSPSQ-GPQGAPYP-FPPVPTVTTSSATLSTVIATVASSPAGYK 629
Query: 126 TYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFT 185
T PG P YG ++ SPG +Y T +TP PG P GS +
Sbjct: 630 TASPPGPP----PYG-------KRAPSPG-----AYKT--ATP-PGYKP------GSPPS 664
Query: 186 TSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTP 245
+G G + +G + + P P+ G G P P + + P P
Sbjct: 665 FRTGTPPGYRGTSPPAGPGTFK---PGSPTVGPG---------PLPPAGPSGLPSLPPPP 712
Query: 246 STNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIK 283
+ A+ PP T Q +P EY T SP P +
Sbjct: 713 AAPAS----GPPLSAT-QIKQEPAEEYETPESPVPPAR 745
Score = 31.6 bits (70), Expect = 2.0
Identities = 49/217 (22%), Positives = 75/217 (34%), Gaps = 26/217 (11%)
Query: 50 SETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHIL---PTPSSQTM 106
S + S + GS+ N S S+ G S RP H PP ++P + P P S +
Sbjct: 130 STSPSIYSPGSVENDSDSSSGLSQGPARPYH---PPPLFPPSPQPPDSTPRQPEASFEPH 186
Query: 107 AAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFS 166
+ T + M+ T+ PG P GG+ G G +S
Sbjct: 187 PSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGG-GAASSVG 245
Query: 167 TPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYN 226
P G+ Q TT + +SSG + + P G G
Sbjct: 246 GPNGGK-------QHPPPTTPISV--------SSSGASGAPPTKPPTTPVGGGNLP---- 286
Query: 227 SSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQ 263
S+P PA++ + P P+ P G+ +Q
Sbjct: 287 SAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 50.1 bits (118), Expect = 5e-06
Identities = 64/298 (21%), Positives = 112/298 (37%), Gaps = 33/298 (11%)
Query: 6 LTSPHSRLSGSSESPSGPKLGNSHINS-NSMTPNGTEVKTEPMSSSETASTTADGSLNNF 64
L SPH+ G P GP+ G + S +S+ P + PM ++S+++ + ++
Sbjct: 329 LPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSS 388
Query: 65 SGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAY 124
S S+ SSS SP P Q P YPH P P+S +++ + +
Sbjct: 389 SSSS--SSSASPFPASQALPS--------YPHSFPPPTSLSVSNQPPKYTQPSLPSQAVW 438
Query: 125 ATYPQPGQPYG--ISSYGI------KTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYS 176
+ P P PYG +++ + G S + P T + Q Q
Sbjct: 439 SQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQ 498
Query: 177 YQMQ--GSSFTTSSGIYTGNNSLTNSSGFNS----------SQQDYPSYPSFGQGQYAQY 224
Q Q G+S G + + L S ++ S + YP P+ ++Q
Sbjct: 499 QQQQHHGNSGPPPPGAFP--HPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQV 556
Query: 225 YNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPI 282
S P SS+++ ++ ++ +Y P Q P T+ + S +
Sbjct: 557 SYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATL 614
Score = 43.9 bits (102), Expect = 4e-04
Identities = 72/278 (25%), Positives = 99/278 (35%), Gaps = 81/278 (29%)
Query: 6 LTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFS 65
L PHS++S S P+GP + SSS ++S+T+ GS
Sbjct: 549 LPPPHSQVSYSQAGPNGPPVS---------------------SSSNSSSSTSQGSY---- 583
Query: 66 GSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYA 125
P SP Q P PYP P P+ T +A T T Y
Sbjct: 584 ------------PCSHPSPSQ-GPQGAPYP-FPPVPTVTTSSATLSTVIATVASSPAGYK 629
Query: 126 TYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFT 185
T PG P YG ++ SPG +Y T +TP PG P GS +
Sbjct: 630 TASPPGPP----PYG-------KRAPSPG-----AYKT--ATP-PGYKP------GSPPS 664
Query: 186 TSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTP 245
+G G + +G + + P P+ G G P P + + P P
Sbjct: 665 FRTGTPPGYRGTSPPAGPGTFK---PGSPTVGPG---------PLPPAGPSGLPSLPPPP 712
Query: 246 STNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIK 283
+ A+ PP T Q +P EY T SP P +
Sbjct: 713 AAPAS----GPPLSAT-QIKQEPAEEYETPESPVPPAR 745
Score = 31.6 bits (70), Expect = 2.0
Identities = 49/217 (22%), Positives = 75/217 (34%), Gaps = 26/217 (11%)
Query: 50 SETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHIL---PTPSSQTM 106
S + S + GS+ N S S+ G S RP H PP ++P + P P S +
Sbjct: 130 STSPSIYSPGSVENDSDSSSGLSQGPARPYH---PPPLFPPSPQPPDSTPRQPEASFEPH 186
Query: 107 AAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFS 166
+ T + M+ T+ PG P GG+ G G +S
Sbjct: 187 PSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGG-GAASSVG 245
Query: 167 TPQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYN 226
P G+ Q TT + +SSG + + P G G
Sbjct: 246 GPNGGK-------QHPPPTTPISV--------SSSGASGAPPTKPPTTPVGGGNLP---- 286
Query: 227 SSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQ 263
S+P PA++ + P P+ P G+ +Q
Sbjct: 287 SAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323
>gi|5454064 RNA binding motif protein 14 [Homo sapiens]
Length = 669
Score = 49.7 bits (117), Expect = 7e-06
Identities = 65/278 (23%), Positives = 103/278 (37%), Gaps = 36/278 (12%)
Query: 15 GSSESPSGPKLGNSHINSNSMTPNGTEVK---TEPMSSSETASTTADGSLNNFSGSAIGS 71
G + P+ P G P + V +P + S + + +++G
Sbjct: 200 GQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGV 259
Query: 72 SSFSPRPTHQFSPPQIYPS---NRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYATY- 127
+ T Q + + PS PY L +PSSQ+ AA + A+A ++Y
Sbjct: 260 GYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYG 319
Query: 128 PQPGQPYGISSYGIKTEGGLSQSQSP---GQTGFLSYG-----TSFSTPQPGQAPYSYQM 179
Q ++SYG + S P G SYG +S++T + SY
Sbjct: 320 GQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGA 379
Query: 180 QGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQY-YNSSPYPAHYMTSS 238
Q +S+ G S +S + + Y + PS A Y S+PY A S
Sbjct: 380 QAASY--------GAQSAASSLAYGAQAASYNAQPS------ASYNAQSAPYAAQQAASY 425
Query: 239 NTSPTT----PSTNATYQLQEPPSGITSQAVTDPTAEY 272
++ P P+T A Y Q P+ +QA T Y
Sbjct: 426 SSQPAAYVAQPATAAAYASQ--PAAYAAQATTPMAGSY 461
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 48.5 bits (114), Expect = 2e-05
Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 35/320 (10%)
Query: 4 QDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNN 63
+ TSP S SGS E+ + P ++ TP +E T SS + +TT +
Sbjct: 937 ESTTSPIS--SGSMETTALP--------GSTTTPGLSERSTTFHSSPRSPATTLSPASTT 986
Query: 64 FSGSAIGSSSFSPRP--THQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQA 121
SG + S++ RP TH + +P + P L S+ + ++ G T T
Sbjct: 987 SSGVSEESTTSRSRPGSTHTTA----FPDSTTTPG-LSRHSTTSHSSPGSTDTTL----L 1037
Query: 122 TAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFST--PQPGQAPYSYQM 179
A T P Q S+ + G + SPG T LS+G +T PG ++
Sbjct: 1038 PASTTTSGPSQE---STTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGS---THTT 1091
Query: 180 QGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSN 239
TTSSGI + + +S+G + S S G + + + P H S
Sbjct: 1092 LFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPP 1151
Query: 240 TSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSD---RLRRGSDG 296
++ T P +T + P S T+ P + ++ HS + I S D +
Sbjct: 1152 STATAPVEESTTYHRSPGSTPTTHF---PASSTTSGHSEKSTIFHSSPDASGTTPSSAHS 1208
Query: 297 KSRGRGRRNNNPSPPPDSDL 316
+ GRG + P +++
Sbjct: 1209 TTSGRGESTTSRISPGSTEI 1228
Score = 48.5 bits (114), Expect = 2e-05
Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 35/320 (10%)
Query: 4 QDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNN 63
+ TSP S SGS E+ + P ++ TP +E T SS + +TT +
Sbjct: 2020 ESTTSPIS--SGSMETTALP--------GSTTTPGLSEKSTTFHSSPRSPATTLSPASTT 2069
Query: 64 FSGSAIGSSSFSPRP--THQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQA 121
SG + S++ RP TH + +P + P L S+ + ++ G T T
Sbjct: 2070 SSGVSEESTTSHSRPGSTHTTA----FPDSTTTPG-LSRHSTTSHSSPGSTDTTL----L 2120
Query: 122 TAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFST--PQPGQAPYSYQM 179
A T P Q S+ + G + SPG T LS+G +T PG ++
Sbjct: 2121 PASTTTSGPSQE---STTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGS---THTT 2174
Query: 180 QGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSN 239
TTSSGI + + +S+G + S S G + + + P H S
Sbjct: 2175 LFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPP 2234
Query: 240 TSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSD---RLRRGSDG 296
++ T P +T + P S T+ P + ++ HS + I S D +
Sbjct: 2235 STATAPVEESTTYHRSPGSTPTTHF---PASSTTSGHSEKSTIFHSSPDASGTTPSSAHS 2291
Query: 297 KSRGRGRRNNNPSPPPDSDL 316
+ GRG + P +++
Sbjct: 2292 TTSGRGESTTSRISPGSTEI 2311
Score = 47.8 bits (112), Expect = 3e-05
Identities = 76/320 (23%), Positives = 128/320 (40%), Gaps = 35/320 (10%)
Query: 4 QDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNN 63
+ TSP S SGS E+ + P ++ TP +E T SS + +TT +
Sbjct: 3577 ESTTSPIS--SGSMETTALP--------GSTTTPGLSEKSTTFHSSPRSPATTLSPASTT 3626
Query: 64 FSGSAIGSSSFSPRP--THQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQA 121
SG + S++ RP TH + +P + P L S+ + ++ G T TT + +
Sbjct: 3627 SSGVSEESTTSHSRPGSTHTTA----FPDSTTTPG-LSRHSTTSHSSPGSTD-TTLLPAS 3680
Query: 122 TAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFST--PQPGQAPYSYQM 179
T + Q S+ + G + SPG T LS+G +T PG ++
Sbjct: 3681 TTTSGSSQE------STTSHSSSGSTDTALSPGSTTALSFGQESTTFHSSPGS---THTT 3731
Query: 180 QGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSN 239
TTSSGI + + +S+G + S S G + + + P H S
Sbjct: 3732 LFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPP 3791
Query: 240 TSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSD---RLRRGSDG 296
++ T P +T + P S T+ P + ++ HS + I S D +
Sbjct: 3792 STATAPVEESTTYHRSPGSTPTTHF---PASSTTSGHSEKSTIFHSSPDASGTTPSSAHS 3848
Query: 297 KSRGRGRRNNNPSPPPDSDL 316
+ GRG + P +++
Sbjct: 3849 TTSGRGESTTSRISPGSTEI 3868
Score = 46.2 bits (108), Expect = 8e-05
Identities = 68/298 (22%), Positives = 111/298 (37%), Gaps = 47/298 (15%)
Query: 7 TSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSG 66
TS HS S S S G + +++S T E T +S T TT GS G
Sbjct: 2739 TSGHSEKSTIFHS-SPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTTT-PG 2796
Query: 67 SAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYAT 126
+ S++F P P +P+S T G+ T+ Q + ++T
Sbjct: 2797 LSEASTTFYSSPRS--------------PTTTLSPASMTSLGVGEESTTSRSQPGSTHST 2842
Query: 127 YPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTT 186
P ++ G+ E S SPG T + S +T G+ P ++ + +S T
Sbjct: 2843 V----SPASTTTPGLSEESTTVYSSSPGSTETTVFPRSTTTSVRGEEPTTFHSRPAS--T 2896
Query: 187 SSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQ------------GQYAQYYNSSP----- 229
+ ++T +++ +SG +P P+ Q G+ + + SS
Sbjct: 2897 HTTLFTEDST---TSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGT 2953
Query: 230 --YPAHYMTSSNTSPTTP---STNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPI 282
PA TS +TP S ++T P S T T Y++ SP +
Sbjct: 2954 TLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATL 3011
Score = 45.8 bits (107), Expect = 1e-04
Identities = 62/294 (21%), Positives = 107/294 (36%), Gaps = 20/294 (6%)
Query: 35 MTPNGTEVKTEPMSSSETASTTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPY 94
++P+ TE T P S T + ++ S ++ ++ SP T + ++
Sbjct: 2500 LSPSSTETTTLP--GSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQ 2557
Query: 95 P---HILPTPSSQTMAAYGQTQFTT----GMQQATAYATYPQPGQPYGISSYGIKTEGGL 147
P H P S T + T+ G T P S+ + G
Sbjct: 2558 PGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGST 2617
Query: 148 SQSQSPGQTGFLSYGTSFST--PQPGQAPYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNS 205
+ SPG T LS+G +T PG ++ TTSSGI + + +S+G
Sbjct: 2618 DTALSPGSTTALSFGQESTTFHSSPGS---THTTLFPDSTTSSGIVEASTRVHSSTGSPR 2674
Query: 206 SQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAV 265
+ S S G + + + P H S ++ T P +T + P S T+
Sbjct: 2675 TTLSPASSTSPGLQGESTTFQTHPASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHF- 2733
Query: 266 TDPTAEYSTIHSPSTPIKDSDSD---RLRRGSDGKSRGRGRRNNNPSPPPDSDL 316
P + ++ HS + I S D + + GRG + P +++
Sbjct: 2734 --PASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEI 2785
Score = 44.3 bits (103), Expect = 3e-04
Identities = 67/298 (22%), Positives = 111/298 (37%), Gaps = 47/298 (15%)
Query: 7 TSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSG 66
TS HS S S S G + +++S T E T +S T TT GS G
Sbjct: 2265 TSGHSEKSTIFHS-SPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTTT-PG 2322
Query: 67 SAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYAT 126
+ S++F P P +P+S T G+ T+ Q + ++T
Sbjct: 2323 LSEASTTFYSSPRS--------------PTTTLSPASMTSLGVGEESTTSRSQPGSTHST 2368
Query: 127 YPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTT 186
P ++ G+ E S SPG T + + +T G+ P ++ + +S T
Sbjct: 2369 V----SPASTTTPGLSEESTTVYSSSPGSTETTVFPRTPTTSVRGEEPTTFHSRPAS--T 2422
Query: 187 SSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQ------------GQYAQYYNSSP----- 229
+ ++T +++ +SG +P P+ Q G+ + + SS
Sbjct: 2423 HTTLFTEDST---TSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGT 2479
Query: 230 --YPAHYMTSSNTSPTTP---STNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPI 282
PA TS +TP S ++T P S T T Y++ SP +
Sbjct: 2480 TLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATL 2537
Score = 43.1 bits (100), Expect = 7e-04
Identities = 67/298 (22%), Positives = 110/298 (36%), Gaps = 47/298 (15%)
Query: 7 TSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSG 66
TS HS S S S G + +++S T E T +S T TT GS G
Sbjct: 3822 TSGHSEKSTIFHS-SPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTTT-PG 3879
Query: 67 SAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYAT 126
+ S++F P P +P+S T G+ T+ Q + ++T
Sbjct: 3880 LSEASTTFYSSPRS--------------PTTTLSPASMTSLGVGEESTTSRSQPGSTHST 3925
Query: 127 YPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTT 186
P ++ G+ E S SPG T + S +T + P ++ + +S T
Sbjct: 3926 V----SPASTTTPGLSEESTTVYSSSPGSTETTVFPRSTTTSVRREEPTTFHSRPAS--T 3979
Query: 187 SSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQ------------GQYAQYYNSSP----- 229
+ ++T +++ +SG +P P+ Q G+ + + SS
Sbjct: 3980 HTTLFTEDST---TSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGT 4036
Query: 230 --YPAHYMTSSNTSPTTP---STNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPI 282
PA TS +TP S ++T P S T T Y++ SP +
Sbjct: 4037 KLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATL 4094
Score = 42.7 bits (99), Expect = 9e-04
Identities = 62/279 (22%), Positives = 109/279 (39%), Gaps = 44/279 (15%)
Query: 16 SSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFSGSAIGSSSFS 75
SS +G KL + ++ + T + P S T +TT GS + S S
Sbjct: 4029 SSSGSTGTKLSPARSTTSGLVGESTPSRLSP---SSTETTTLPGSPT--------TPSLS 4077
Query: 76 PRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQATAYAT-YPQPGQPY 134
+ T ++ P+ P +P++ T + + T+ Q + + T +P
Sbjct: 4078 EKSTTFYTSPRS-------PDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTS 4130
Query: 135 GIS---SYGIKTEGGLSQSQSPGQTGFLSYGTSFST--PQPGQAPYSYQMQGSSFTTSSG 189
G+S + ++G + SPG T S G +T PG + T +SG
Sbjct: 4131 GLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETTLLPDD---TITSG 4187
Query: 190 IYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNA 249
+ + +S+G + S S G + + + S P +SS+T+P+ PST A
Sbjct: 4188 LVEASTPTHSSTGSLHTTLTPASSTSTGLQEESTTFQSWP------SSSDTTPSPPSTTA 4241
Query: 250 -------TYQLQEPPSGITSQAVTDPT----AEYSTIHS 277
TY + + T + + T E +T+HS
Sbjct: 4242 VPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEESTTVHS 4280
Score = 42.0 bits (97), Expect = 0.001
Identities = 72/328 (21%), Positives = 129/328 (39%), Gaps = 26/328 (7%)
Query: 4 QDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNN 63
++ T+ HS ++ +PS + S + S T + + T+ M E+ +T+ G +
Sbjct: 4522 EESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPGSTQTMHFPESNTTSGRGEEST 4581
Query: 64 FS-GSAIGSSSFSPRPTHQF-SPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTT---GM 118
S S + S +P T P Y S+ P S T + G+++ +T
Sbjct: 4582 TSHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATTHFPDSSTTS--GRSEESTASHSS 4639
Query: 119 QQATAYATYPQPGQP---YGISSYGIKTEGGLSQSQSPGQT---GFLSYGTSFSTPQPGQ 172
Q AT P G S+ + G + + PG T G T+F + P
Sbjct: 4640 QDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPGLSEKSTTFHS-SPSS 4698
Query: 173 APYSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSP--- 229
P ++ S+ +T+ G + ++ +S ++ + G + + Y+SSP
Sbjct: 4699 TPTTH---FSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTAYHSSPGST 4755
Query: 230 YPAHYMTSSNTS-----PTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKD 284
H+ SS S T ++ T+ + PPS TS V +PT+ +S+ S +T
Sbjct: 4756 QTMHFPESSTASGRSEESRTSHSSTTHTISSPPS-TTSALVEEPTSYHSSPGSIATTHFP 4814
Query: 285 SDSDRLRRGSDGKSRGRGRRNNNPSPPP 312
S R + + N +P P
Sbjct: 4815 ESSTTSGRSEESTASHSSPDTNGITPLP 4842
Score = 37.7 bits (86), Expect = 0.028
Identities = 67/319 (21%), Positives = 120/319 (37%), Gaps = 29/319 (9%)
Query: 4 QDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNN 63
++ T+ HS ++ +PS + S + S T + + T+ M E+ +T+ G +
Sbjct: 3439 EESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPGSTQTMHFPESDTTSGRGEEST 3498
Query: 64 FS-GSAIGSSSFSPRPTHQF-SPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTT---GM 118
S S + S +P T P Y S+ P S T + G+++ +T
Sbjct: 3499 TSHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATTHFPDSSTTS--GRSEESTASHSS 3556
Query: 119 QQATAYATYPQPGQP---YGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPY 175
Q AT P G S+ + G + + PG ST PG +
Sbjct: 3557 QDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPG-----------STTTPGLSEK 3605
Query: 176 SYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYM 235
S S + ++ T + + T SSG + S P ++P + +
Sbjct: 3606 STTFHSSPRSPAT---TLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHS 3662
Query: 236 TSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGSD 295
T+S++SP + T P S TS + + T +S+ S T + + L G +
Sbjct: 3663 TTSHSSPGSTDTTLL-----PASTTTSGSSQESTTSHSSSGSTDTALSPGSTTALSFGQE 3717
Query: 296 GKSRGRGRRNNNPSPPPDS 314
+ + + + PDS
Sbjct: 3718 STTFHSSPGSTHTTLFPDS 3736
Score = 34.7 bits (78), Expect = 0.24
Identities = 65/320 (20%), Positives = 115/320 (35%), Gaps = 31/320 (9%)
Query: 4 QDLTSPHSRLSGSSESPSGPKLGNSHINSNS----MTPNGTEVKTEPMSS-----SETAS 54
++ T+ HS ++ +PS + S + S +P T+ P SS SE +
Sbjct: 1882 EESTTVHSSPVATATTPSPARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESR 1941
Query: 55 TTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQF 114
T+ + + S +S+ PT S P + + S+ A +Q
Sbjct: 1942 TSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEESTASHSSQD 2001
Query: 115 TTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAP 174
TG A +T G S+ + G + + PG ST PG +
Sbjct: 2002 ATGTIVLPARST---TSVLLGESTTSPISSGSMETTALPG-----------STTTPGLSE 2047
Query: 175 YSYQMQGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHY 234
S S + ++ T + + T SSG + S P ++P + +
Sbjct: 2048 KSTTFHSSPRSPAT---TLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRH 2104
Query: 235 MTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSDRLRRGS 294
T+S++SP + T P S TS + T +S+ S T + + L G
Sbjct: 2105 STTSHSSPGSTDTTLL-----PASTTTSGPSQESTTSHSSPGSTDTALSPGSTTALSFGQ 2159
Query: 295 DGKSRGRGRRNNNPSPPPDS 314
+ + + + + PDS
Sbjct: 2160 ESTTFHSSPGSTHTTLFPDS 2179
Score = 33.9 bits (76), Expect = 0.40
Identities = 59/273 (21%), Positives = 102/273 (37%), Gaps = 42/273 (15%)
Query: 6 LTSPHSRLSGSSESP-----SGPKLGNSHINSNSMTPNGTEVKTEPMSSSETA------- 53
++S S S E P S +H +S T +E T SS +
Sbjct: 4591 ISSAPSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPA 4650
Query: 54 ----------STTADGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSS 103
STT+ S + +A+ S+ +P + + + PS+ P H + SS
Sbjct: 4651 RSTTSVLLGESTTSPISSGSMETTALPGSTTTPGLSEKSTTFHSSPSSTPTTHF--SASS 4708
Query: 104 QTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSY-- 161
T+ ++ TT A AT P P + S+ E + SPG T + +
Sbjct: 4709 TTLGRSEES--TTVHSSPVATATTPSPAR----STTSGLVEESTAYHSSPGSTQTMHFPE 4762
Query: 162 -GTSFSTPQPGQAPYSYQMQ--GSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQ 218
T+ + + +S S +T+S + S +S G ++ S + G+
Sbjct: 4763 SSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSIATTHFPESSTTSGR 4822
Query: 219 GQYAQYYNSSP-------YPAHYMTSSNTSPTT 244
+ + +SSP PAH+ TS + +T
Sbjct: 4823 SEESTASHSSPDTNGITPLPAHFTTSGRIAEST 4855
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 48.5 bits (114), Expect = 2e-05
Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 35/320 (10%)
Query: 4 QDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNN 63
+ TSP S SGS E+ + P ++ TP +E T SS + +TT +
Sbjct: 424 ESTTSPIS--SGSMETTALP--------GSTTTPGLSERSTTFHSSPRSPATTLSPASTT 473
Query: 64 FSGSAIGSSSFSPRP--THQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQA 121
SG + S++ RP TH + +P + P L S+ + ++ G T T
Sbjct: 474 SSGVSEESTTSRSRPGSTHTTA----FPDSTTTPG-LSRHSTTSHSSPGSTDTTL----L 524
Query: 122 TAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFST--PQPGQAPYSYQM 179
A T P Q S+ + G + SPG T LS+G +T PG ++
Sbjct: 525 PASTTTSGPSQE---STTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGS---THTT 578
Query: 180 QGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSN 239
TTSSGI + + +S+G + S S G + + + P H S
Sbjct: 579 LFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPP 638
Query: 240 TSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTPIKDSDSD---RLRRGSDG 296
++ T P +T + P S T+ P + ++ HS + I S D +
Sbjct: 639 STATAPVEESTTYHRSPGSTPTTHF---PASSTTSGHSEKSTIFHSSPDASGTTPSSAHS 695
Query: 297 KSRGRGRRNNNPSPPPDSDL 316
+ GRG + P +++
Sbjct: 696 TTSGRGESTTSRISPGSTEI 715
Score = 34.3 bits (77), Expect = 0.31
Identities = 64/287 (22%), Positives = 105/287 (36%), Gaps = 58/287 (20%)
Query: 8 SPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETA---STTADGSLNNF 64
S S S SS + L ++S+ P T + P S+ T +TTA G L
Sbjct: 1231 SQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTLLPDNTTASGLLE-- 1288
Query: 65 SGSAIGSSSFSPRPTHQFSPP------------QIYPSNRPYPHILPT------------ 100
+ + + SS+ SP T SP Q +PS++ PT
Sbjct: 1289 ASTPVHSSTGSPHTT--LSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELSTTS 1346
Query: 101 ---PSSQTMAAYGQTQFTTGMQQAT--------AYATYPQPGQPYGISSYGIKTEGGLSQ 149
PSS + + T G + + A AT P P + S+ E +
Sbjct: 1347 HGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPAR----STTSGLVEESTAY 1402
Query: 150 SQSPGQTGFLSY---GTSFSTPQPGQAPYSYQMQ--GSSFTTSSGIYTGNNSLTNSSGFN 204
SPG T + + T+ + + +S S +T+S + S +S G
Sbjct: 1403 HSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSI 1462
Query: 205 SSQQDYPSYPSFGQGQYAQYYNSSP-------YPAHYMTSSNTSPTT 244
++ S + G+ + + +SSP PAH+ TS + +T
Sbjct: 1463 ATTHFPESSTTSGRSEESTASHSSPDTNGITPLPAHFTTSGRIAEST 1509
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 48.5 bits (114), Expect = 2e-05
Identities = 77/280 (27%), Positives = 108/280 (38%), Gaps = 58/280 (20%)
Query: 2 EMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSL 61
+M S HS +G+ P+ K S + MT +++S T+ T + S
Sbjct: 2031 QMATSASIHSTPTGTVPPPTTLKATGSTHTAPPMT----------VTTSGTSQTHSSFST 2080
Query: 62 NNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQFTTGMQQA 121
S S I SSS+ P+ + S P P PH+ SS T T +T Q +
Sbjct: 2081 ATASSSFISSSSWLPQ--NSSSRPPSSPITTQLPHL----SSAT------TPVSTTNQLS 2128
Query: 122 TAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAPYSYQMQG 181
++++ P P P +SSY + S S QT S GTS
Sbjct: 2129 SSFS--PSPSAPSTVSSY-------VPSSHSSPQTSSPSVGTS----------------- 2162
Query: 182 SSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTS 241
SS + +S T SSG +SS +P+ S + + SS PA T T
Sbjct: 2163 -----SSFVSAPVHSTTLSSGSHSSLSTHPTTASVSA---SPLFPSS--PAASTTIRATL 2212
Query: 242 PTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPSTP 281
P T S+ T P S +T STI PSTP
Sbjct: 2213 PHTISSPFTLSALLPISTVTVSPTPSSHLASSTIAFPSTP 2252
Score = 43.9 bits (102), Expect = 4e-04
Identities = 72/314 (22%), Positives = 122/314 (38%), Gaps = 53/314 (16%)
Query: 2 EMQDLTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTA---- 57
+M S HS +G+ P+ K S + MTP + P S S ++T+
Sbjct: 1862 QMATSASIHSMPTGTIPPPTTIKATGSTHTAPPMTPTTSGTSQSPSSFSTAKTSTSLPYH 1921
Query: 58 DGSLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYGQTQF-TT 116
S ++ + +++ +P+ T + + + LPTP + G + F +T
Sbjct: 1922 TSSTHHPEVTPTSTTNITPKHTSTGTRTPVAHTTSASSSRLPTPFTTHSPPTGSSPFSST 1981
Query: 117 GMQQATAY---ATYPQPGQPY-----------------GISSYGIKTEGGLSQSQS---- 152
G AT++ TYP P P + I T ++ S S
Sbjct: 1982 GPMTATSFQTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVIITTHTQMATSASIHST 2041
Query: 153 -----PGQTGFLSYGTSFSTPQPGQAPYSYQMQGSSFTTSS-GIYTGNNSLTNSSGF--- 203
P T + G++ + P P + G+S T SS T ++S +SS +
Sbjct: 2042 PTGTVPPPTTLKATGSTHTAP-----PMTVTTSGTSQTHSSFSTATASSSFISSSSWLPQ 2096
Query: 204 NSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTSS-NTSPTTPSTNATY--------QLQ 254
NSS + PS P Q + + + ++SS + SP+ PST ++Y Q
Sbjct: 2097 NSSSRP-PSSPITTQLPHLSSATTPVSTTNQLSSSFSPSPSAPSTVSSYVPSSHSSPQTS 2155
Query: 255 EPPSGITSQAVTDP 268
P G +S V+ P
Sbjct: 2156 SPSVGTSSSFVSAP 2169
Score = 42.4 bits (98), Expect = 0.001
Identities = 66/290 (22%), Positives = 96/290 (33%), Gaps = 25/290 (8%)
Query: 6 LTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTEPMSSSETASTTADGSLNNFS 65
+T +R + S+ SP+ S + P T P T S N
Sbjct: 1301 VTQATTRATASTASPATTSTAQSTTRTTMTLPTPATSGTSP---------TLPKSTNQEL 1351
Query: 66 GSAIGSSSFSPRPTHQFS--PPQIYPSNRPYPHILPTPSSQTMAAYG--QTQFTTGMQQA 121
+ + PRPT + P P P T ++T Y QT TT
Sbjct: 1352 PGTTATQTTGPRPTPASTTGPTTPQPGQPTRPTATETTQTRTTTEYTTPQTPHTTH-SPP 1410
Query: 122 TAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQA--PYSYQM 179
TA + P G S + T S ++ T + TS TP P QM
Sbjct: 1411 TAGSPVPSTGPVTATSFHATTTYPTPSHPETTLPTHVPPFSTSLVTPSTHTVITPTHAQM 1470
Query: 180 --QGSSFTTSSGIYTGNNSLTNSSGFNSSQQDYPSYPSFGQGQYAQYYNSSPYPAHYMTS 237
S+ + +G +L + +++ P+ Q + N +P H TS
Sbjct: 1471 ATSASNHSAPTGTIPPPTTLKATGSTHTAPPITPTTSGTSQAHSSFSTNKTPTSLHSHTS 1530
Query: 238 SN-------TSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPST 280
S TS TT + N T P T+ A + T HSP T
Sbjct: 1531 STHHPEVTPTSTTTITPNPTSTRTRTPVAHTNSATSSRPPPPFTTHSPPT 1580
Score = 40.4 bits (93), Expect = 0.004
Identities = 69/299 (23%), Positives = 110/299 (36%), Gaps = 42/299 (14%)
Query: 7 TSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTEVKTE-PMSSSETASTTADGSLNNFS 65
TS HS S + P ++ ++TPN T +T P++ + +A+++
Sbjct: 1523 TSLHSHTSSTHHPEVTPT------STTTITPNPTSTRTRTPVAHTNSATSSRPPPPFTTH 1576
Query: 66 GSAIGSSSFS---PRPTHQFSPPQIYPSNR-----------PYPHILPTPSSQTMAAYGQ 111
GSS FS P F YP+ P+ L TPS+ T+
Sbjct: 1577 SPPTGSSPFSSTGPMTATSFKTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVITPTH 1636
Query: 112 TQFTTGMQ-QATAYATYPQP------GQPYGISSYGIKTEGGLSQSQSPGQTGFLSYGTS 164
Q T + T P P G + + + T G SQ+ S T TS
Sbjct: 1637 AQMATSASIHSMPTGTIPPPTTLKATGSTHTAPTMTLTTSG-TSQALSSLNTA----KTS 1691
Query: 165 FSTPQPGQAPYSYQMQGSSFT--TSSGIYTGNNSLT-NSSGFNSSQQDYPSYPSFGQGQY 221
S + + + +S T T + TG +T +SG + S+ SF +
Sbjct: 1692 TSLHSHTSSTHHAEATSTSTTNITPNPTSTGTPPMTVTTSGTSQSRS------SFSTAKT 1745
Query: 222 AQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGITSQAVTDPTAEYSTIHSPST 280
+ +S H+ ++TS T+ + N T P T+ A + T HSP T
Sbjct: 1746 STSLHSHTSSTHHPEVTSTSTTSITPNHTSTGTRTPVAHTTSATSSRLPTPFTTHSPPT 1804
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,831,756
Number of Sequences: 37866
Number of extensions: 1229629
Number of successful extensions: 6286
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 333
Number of HSP's that attempted gapping in prelim test: 4764
Number of HSP's gapped (non-prelim): 1370
length of query: 557
length of database: 18,247,518
effective HSP length: 107
effective length of query: 450
effective length of database: 14,195,856
effective search space: 6388135200
effective search space used: 6388135200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.