Guide to the Human Genome
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Name: EYA4 Sequence: fasta or formatted (639aa) NCBI GI: 26667257
Description:

eyes absent 4 isoform d

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [639aa] eyes absent 4 isoform a
alt prot [616aa] eyes absent 4 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         42           3
 C cysteine            1.3          8           1
 D aspartate           5.3         34           2
 E glutamate           4.4         28           2
 F phenylalanine       2.8         18           2
 G glycine             7.4         47           3
 H histidine           1.7         11           1
 I isoleucine          3.3         21           2
 K lysine              3.1         20           2
 L leucine             9.1         58           2
 M methionine          2.5         16           1
 N asparagine          5.0         32           2
 P proline             5.9         38           3
 Q glutamine           5.6         36           2
 R arginine            3.3         21           2
 S serine             13.3         85           2
 T threonine           9.4         60           3
 V valine              4.1         26           2
 W tryptophan          0.9          6           1
 Y tyrosine            5.0         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eyes absent 4 isoform d 
EYA4                  0.983   eyes absent 4 isoform a 
EYA4                  0.934   eyes absent 4 isoform b 
EYA1                  0.631   eyes absent 1 isoform b 
EYA1                  0.631   eyes absent 1 isoform b 
EYA1                  0.614   eyes absent 1 isoform a 
EYA1                  0.571   eyes absent 1 isoform c 
EYA2                  0.445   eyes absent 2 isoform a 
EYA2                  0.445   eyes absent 2 isoform b 
EYA2                  0.445   eyes absent 2 isoform a 
EYA2                  0.445   eyes absent 2 isoform a 
EYA3                  0.439   eyes absent 3 
EYA2                  0.421   eyes absent 2 isoform c 
MUC6                  0.026   mucin 6, gastric 
MUC12                 0.024   PREDICTED: mucin 12 
MUC12                 0.022   PREDICTED: mucin 12, cell surface associated 
MUC5B                 0.020   mucin 5, subtype B, tracheobronchial 
EWSR1                 0.019   Ewing sarcoma breakpoint region 1 isoform 1 
POLR2A                0.019   DNA-directed RNA polymerase II A 
LOC729792             0.017   PREDICTED: hypothetical protein 
LOC729792             0.017   PREDICTED: hypothetical protein 
LOC729792             0.017   PREDICTED: hypothetical protein 
LOC100294249          0.017   PREDICTED: hypothetical protein XP_002344067 
LOC100294238          0.017   PREDICTED: hypothetical protein 
LOC100294204          0.017   PREDICTED: hypothetical protein 
LOC100294136          0.017   PREDICTED: hypothetical protein 
LOC100294091          0.017   PREDICTED: hypothetical protein 
LOC730401             0.017   PREDICTED: hypothetical protein 
LOC100294420          0.017   PREDICTED: similar to mucin 2 
LOC100294501          0.017   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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