Search of human proteins with 25777659

Search of human proteins with 25777659

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25777659 CD200 receptor 1 isoform d [Homo sapiens]
         (325 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25777659 CD200 receptor 1 isoform d [Homo sapiens]                 671   0.0  
gi|20270365 CD200 receptor 1 isoform a [Homo sapiens]                 658   0.0  
gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo sa...   372   e-103
gi|25777657 CD200 receptor 1 isoform c [Homo sapiens]                 313   1e-85
gi|25777655 CD200 receptor 1 isoform b [Homo sapiens]                 300   1e-81
gi|5360210 poliovirus receptor related 2 isoform alpha precursor...    46   5e-05
gi|112789532 poliovirus receptor related 2 isoform delta precurs...    46   5e-05
gi|11386199 poliovirus receptor-related 3 [Homo sapiens]               45   1e-04
gi|118572606 hemicentin 1 [Homo sapiens]                               44   1e-04
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi...    41   0.002
gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo sap...    41   0.002
gi|66346706 neuronal growth regulator 1 [Homo sapiens]                 40   0.003
gi|54607118 leucine-rich repeats and immunoglobulin-like domains...    40   0.004
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]                    39   0.008
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]                    39   0.008
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]                    39   0.008
gi|148664211 immunoglobulin superfamily, member 4D isoform 2 [Ho...    37   0.024
gi|148664190 immunoglobulin superfamily, member 4D isoform 1 [Ho...    37   0.024
gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]     37   0.024
gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]     37   0.024
gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]     37   0.024
gi|33519481 neural cell adhesion molecule 2 precursor [Homo sapi...    37   0.024
gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo...    37   0.031
gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo ...    37   0.031
gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo s...    37   0.031
gi|209413732 poliovirus receptor isoform delta [Homo sapiens]          37   0.031
gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]          37   0.031
gi|209413728 poliovirus receptor isoform beta [Homo sapiens]           37   0.031
gi|209413726 poliovirus receptor isoform alpha [Homo sapiens]          37   0.031
gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap...    37   0.031

>gi|25777659 CD200 receptor 1 isoform d [Homo sapiens]
          Length = 325

 Score =  671 bits (1732), Expect = 0.0
 Identities = 325/325 (100%), Positives = 325/325 (100%)

Query: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC 60
           MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC
Sbjct: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC 60

Query: 61  CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR 120
           CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR
Sbjct: 61  CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR 120

Query: 121 TVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISW 180
           TVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISW
Sbjct: 121 TVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISW 180

Query: 181 IPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIELLPVPGAKKS 240
           IPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIELLPVPGAKKS
Sbjct: 181 IPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIELLPVPGAKKS 240

Query: 241 AKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKTESTPVVEEDEMQPYASYTEKNNP 300
           AKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKTESTPVVEEDEMQPYASYTEKNNP
Sbjct: 241 AKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKTESTPVVEEDEMQPYASYTEKNNP 300

Query: 301 LYDTTNKVKASEALQSEVDTDLHTL 325
           LYDTTNKVKASEALQSEVDTDLHTL
Sbjct: 301 LYDTTNKVKASEALQSEVDTDLHTL 325


>gi|20270365 CD200 receptor 1 isoform a [Homo sapiens]
          Length = 348

 Score =  658 bits (1698), Expect = 0.0
 Identities = 325/348 (93%), Positives = 325/348 (93%), Gaps = 23/348 (6%)

Query: 1   MLCPWRTANLGLLLILTIFLVA-----------------------ASSSLCMDEKQITQN 37
           MLCPWRTANLGLLLILTIFLVA                       ASSSLCMDEKQITQN
Sbjct: 1   MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60

Query: 38  YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 97
           YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE
Sbjct: 61  YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120

Query: 98  TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL 157
           TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL
Sbjct: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL 180

Query: 158 FQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 217
           FQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH
Sbjct: 181 FQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 240

Query: 218 VSHLTGNKSLYIELLPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKT 277
           VSHLTGNKSLYIELLPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKT
Sbjct: 241 VSHLTGNKSLYIELLPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKT 300

Query: 278 ESTPVVEEDEMQPYASYTEKNNPLYDTTNKVKASEALQSEVDTDLHTL 325
           ESTPVVEEDEMQPYASYTEKNNPLYDTTNKVKASEALQSEVDTDLHTL
Sbjct: 301 ESTPVVEEDEMQPYASYTEKNNPLYDTTNKVKASEALQSEVDTDLHTL 348


>gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo
           sapiens]
          Length = 271

 Score =  372 bits (956), Expect = e-103
 Identities = 193/265 (72%), Positives = 211/265 (79%), Gaps = 7/265 (2%)

Query: 13  LLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIII 72
           LLI  I +V+ASSS CM  KQ+TQNYS + AE N S PV M  NAVLCCPPIALRNLIII
Sbjct: 6   LLISIIIMVSASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALRNLIII 65

Query: 73  TWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRC 132
           TWEIILRGQPSCTKAYKKETNETKETNCT ERITWVSRPDQNSDLQIR V  THDGYYR 
Sbjct: 66  TWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRG 125

Query: 133 IMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGD-CATKQE 191
           I+VTPDGNFHRGYHLQVLVTPEV LFQ+RN TAVCKAV GKPAA ISWIPEG   ATKQE
Sbjct: 126 IVVTPDGNFHRGYHLQVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSILATKQE 185

Query: 192 YWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIEL---LPVPGAKKSAKLYIPYI 248
           YW NGTVTVKSTC WE H  STVTCHVSHLTGNKSL ++L   L   G+   + L I Y+
Sbjct: 186 YWGNGTVTVKSTCPWEGHK-STVTCHVSHLTGNKSLSVKLNSGLRTSGSPALSLLIILYV 244

Query: 249 ILT--IIILTIVGFIWLLKVNGCRK 271
            L+  ++IL   GF++  ++N  RK
Sbjct: 245 KLSLFVVILVTTGFVFFQRINHVRK 269


>gi|25777657 CD200 receptor 1 isoform c [Homo sapiens]
          Length = 165

 Score =  313 bits (802), Expect = 1e-85
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC 60
           MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC
Sbjct: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC 60

Query: 61  CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR 120
           CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR
Sbjct: 61  CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR 120

Query: 121 TVAITHDGYYRCIMVTPDGNFHRGYHLQVL 150
           TVAITHDGYYRCIMVTPDGNFHRGYHLQVL
Sbjct: 121 TVAITHDGYYRCIMVTPDGNFHRGYHLQVL 150


>gi|25777655 CD200 receptor 1 isoform b [Homo sapiens]
          Length = 188

 Score =  300 bits (768), Expect = 1e-81
 Identities = 150/173 (86%), Positives = 150/173 (86%), Gaps = 23/173 (13%)

Query: 1   MLCPWRTANLGLLLILTIFLVA-----------------------ASSSLCMDEKQITQN 37
           MLCPWRTANLGLLLILTIFLVA                       ASSSLCMDEKQITQN
Sbjct: 1   MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60

Query: 38  YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 97
           YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE
Sbjct: 61  YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120

Query: 98  TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 150
           TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL
Sbjct: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 173


>gi|5360210 poliovirus receptor related 2 isoform alpha precursor
           [Homo sapiens]
          Length = 479

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 24/142 (16%)

Query: 103 ERITWVSRP-----DQNSDLQIRTVA-----ITHDGYYRCIMVT-PDGNFHRGYHLQVLV 151
           ER+++VS       D  ++LQ  T+A     +  +G Y C   T P G+      L+V+ 
Sbjct: 101 ERLSFVSAKQSTGQDTEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRVIA 160

Query: 152 TPE-------VTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSN---GTVTVK 201
            P+       VT  Q+    A+C +  G+P A ISW+   D   K+   S    GTVTV 
Sbjct: 161 KPKNQAEAQKVTFSQDPTTVALCISKEGRPPARISWLSSLDWEAKETQVSGTLAGTVTVT 220

Query: 202 STCHWEVHNVS---TVTCHVSH 220
           S         +   TVTC V H
Sbjct: 221 SRFTLVPSGRADGVTVTCKVEH 242


>gi|112789532 poliovirus receptor related 2 isoform delta precursor
           [Homo sapiens]
          Length = 538

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 24/142 (16%)

Query: 103 ERITWVSRP-----DQNSDLQIRTVA-----ITHDGYYRCIMVT-PDGNFHRGYHLQVLV 151
           ER+++VS       D  ++LQ  T+A     +  +G Y C   T P G+      L+V+ 
Sbjct: 101 ERLSFVSAKQSTGQDTEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRVIA 160

Query: 152 TPE-------VTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSN---GTVTVK 201
            P+       VT  Q+    A+C +  G+P A ISW+   D   K+   S    GTVTV 
Sbjct: 161 KPKNQAEAQKVTFSQDPTTVALCISKEGRPPARISWLSSLDWEAKETQVSGTLAGTVTVT 220

Query: 202 STCHWEVHNVS---TVTCHVSH 220
           S         +   TVTC V H
Sbjct: 221 SRFTLVPSGRADGVTVTCKVEH 242


>gi|11386199 poliovirus receptor-related 3 [Homo sapiens]
          Length = 549

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 12/142 (8%)

Query: 72  ITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYR 131
           I+WE I  G+ S T A                R+ + +    ++ + +  +  +  G Y 
Sbjct: 89  ISWEKI-HGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKYI 147

Query: 132 CIMVT-PDGNFHRGYHLQVLVTPEVTLFQ---------NRNRTAVCKAVAGKPAAHISWI 181
           C  VT P GN      + VLV P V+L +         N    A+C A  GKP AHI W 
Sbjct: 148 CKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWE 207

Query: 182 PE-GDCATKQEYWSNGTVTVKS 202
            + G+  +    + N T T+ S
Sbjct: 208 GDLGEMESTTTSFPNETATIIS 229


>gi|118572606 hemicentin 1 [Homo sapiens]
          Length = 5635

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 13/80 (16%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP------------EVTLFQNRNRT 164
            LQI  V + H G Y C+  +P G+  R + L V V+P            +VT+  N   +
Sbjct: 2535 LQITNVQVPHTGRYTCLASSPAGHKSRSFSLNVFVSPTIAGVGSDGNPEDVTVILNSPTS 2594

Query: 165  AVCKAVAGKPAAHISWIPEG 184
             VC+A +  PA  I+W  +G
Sbjct: 2595 LVCEAYSYPPAT-ITWFKDG 2613



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 17/129 (13%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP-----------EVTLFQNRNRTA 165
            LQI    +   G Y C+ V   G     Y ++VLV P           EVT+  N++   
Sbjct: 2833 LQIPRAKVEDAGRYTCVAVNEAGEDSLQYDVRVLVPPIIKGANSDLPEEVTVLVNKSALI 2892

Query: 166  VCKAVAGKPAAHISWIPEGDCATKQE---YWSNGTVTVKSTCHWEVHNVSTVTCHVSHLT 222
             C + +G PA   SW  +G    + +   + SNG +      + ++ ++    C   +  
Sbjct: 2893 ECLS-SGSPAPRNSWQKDGQPLLEDDHHKFLSNGRIL--QILNTQITDIGRYVCVAENTA 2949

Query: 223  GNKSLYIEL 231
            G+   Y  L
Sbjct: 2950 GSAKKYFNL 2958



 Score = 38.5 bits (88), Expect = 0.008
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 10/78 (12%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 167
            L+I T  +   G Y C+  +P G+  + Y ++V V P         ++T+ +NR  T  C
Sbjct: 3584 LRISTAQVEDTGRYTCLASSPAGDDDKEYLVRVHVPPNIAGTDEPRDITVLRNRQVTLEC 3643

Query: 168  KAVAGKPAAHISWIPEGD 185
            K+ A  P   I+W+  G+
Sbjct: 3644 KSDAVPPPV-ITWLRNGE 3660



 Score = 38.1 bits (87), Expect = 0.011
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 17/132 (12%)

Query: 113  QNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-------TLFQNRNRTA 165
            +N  L I++  +T  G Y C+     G   R   LQV V P +       T+  N   T 
Sbjct: 3764 ENGFLHIQSAHVTDTGRYLCMATNAAGTDRRRIDLQVHVPPSIAPGPTNMTVIVNVQTTL 3823

Query: 166  VCKAVAGKPAAHISWIPEGDCATKQE------YWSNGTVTVKSTCHWEVHNVSTVTCHVS 219
             C+A  G P   I+W   G      +        S+G++ + S     V + +T  C V+
Sbjct: 3824 ACEA-TGIPKPSINWRKNGHLLNVDQNQNSYRLLSSGSLVIISP---SVDDTATYECTVT 3879

Query: 220  HLTGNKSLYIEL 231
            +  G+    ++L
Sbjct: 3880 NGAGDDKRTVDL 3891



 Score = 37.0 bits (84), Expect = 0.024
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 16/127 (12%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAV-------CKA 169
            + I +  I+  G Y+C+ +   G     Y LQV V P ++   N     V       C+A
Sbjct: 1976 IDIESAQISDAGIYKCVAINSAGATELFYSLQVHVAPSISGSNNMVAVVVNNPVRLECEA 2035

Query: 170  VAGKPAAHISWIPEGDCATKQEYWSNGTVT-----VKSTCHWEVHNVSTVTCHVSHLTGN 224
              G PA  ++W+ +G   +    +SNG        + +    ++ +    TC   +  G 
Sbjct: 2036 -RGIPAPSLTWLKDGSPVSS---FSNGLQVLSGGRILALTSAQISDTGRYTCVAVNAAGE 2091

Query: 225  KSLYIEL 231
            K   I+L
Sbjct: 2092 KQRDIDL 2098



 Score = 35.4 bits (80), Expect = 0.070
 Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 23/130 (17%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------------EVTLFQNR 161
            LQI      + G Y C+     G   + Y ++V + P               EV +  N 
Sbjct: 2631 LQILNAQEDNAGRYSCVATNEAGEMIKHYEVKVYIPPIINKGDLWGPGLSPKEVKIKVNN 2690

Query: 162  NRTAVCKAVAGKPAAHISWIPEGDCATKQEY---WSNG-TVTVKSTCHWEVHNVSTVTCH 217
              T  C+A A  P+A +SW  +G      ++    +NG T+ +K     ++ +    TC 
Sbjct: 2691 TLTLECEAYA-IPSASLSWYKDGQPLKSDDHVNIAANGHTLQIKEA---QISDTGRYTCV 2746

Query: 218  VSHLTGNKSL 227
             S++ G   L
Sbjct: 2747 ASNIAGEDEL 2756



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 15/114 (13%)

Query: 80   GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
            G P  T A+ K     + ++  + RI         S LQI     +  G Y CI    +G
Sbjct: 3177 GIPPPTIAWLKNHKRIENSDSLEVRIL-----SGGSKLQIARSQHSDSGNYTCIASNMEG 3231

Query: 140  NFHRGYHLQVLVTP---------EVTLFQNRNRTAVCKAVAGKPAAHISWIPEG 184
               + Y L + V P         +V++    N   VC A  G P   I W+ +G
Sbjct: 3232 KAQKYYFLSIQVPPSVAGAEIPSDVSVLLGENVELVCNA-NGIPTPLIQWLKDG 3284



 Score = 32.7 bits (73), Expect = 0.45
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 11/83 (13%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP----------EVTLFQNR 161
            D+   LQ++ + ++  G Y C+ V   G   + Y L V   P           +++ +  
Sbjct: 2343 DEGHILQLKNIHVSDTGRYVCVAVNVAGMTDKKYDLSVHAPPSIIGNHRSPENISVVEKN 2402

Query: 162  NRTAVCKAVAGKPAAHISWIPEG 184
            + +  C+A +G P   I+W  +G
Sbjct: 2403 SVSLTCEA-SGIPLPSITWFKDG 2424



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 167
            L++    +   G Y C++    G   + + L VLV P         +V + + ++ T  C
Sbjct: 2442 LRLMQTTMEDAGQYTCVVRNAAGEERKIFGLSVLVPPHIVGENTLEDVKVKEKQSVTLTC 2501

Query: 168  KAVAGKPAAHISWIPEGDCATKQE--YWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNK 225
            + V G P   I+W  +G    + E  +  +G   ++ T + +V +    TC  S   G+K
Sbjct: 2502 E-VTGNPVPEITWHKDGQPLQEDEAHHIISGGRFLQIT-NVQVPHTGRYTCLASSPAGHK 2559

Query: 226  S 226
            S
Sbjct: 2560 S 2560



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCK-------A 169
            LQI    IT  G Y C+     G+  + ++L V V P V   ++ N T V          
Sbjct: 2928 LQILNTQITDIGRYVCVAENTAGSAKKYFNLNVHVPPSVIGPKSENLTVVVNNFISLTCE 2987

Query: 170  VAGKPAAHISWI 181
            V+G P   +SW+
Sbjct: 2988 VSGFPPPDLSWL 2999



 Score = 32.0 bits (71), Expect = 0.77
 Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 23/136 (16%)

Query: 123  AITHD-GYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNR---------TAV---CKA 169
            A+T D G Y C+   P G   R ++L V VTP  T+  N++          T++   C+A
Sbjct: 3309 ALTSDTGKYTCVATNPAGEEDRIFNLNVYVTP--TIRGNKDEAEKLMTLVDTSINIECRA 3366

Query: 170  VAGKPAAHISWIPEG---DCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTG--N 224
              G P   I+W+  G     ++     + G V        +V +V+  TC  S+  G  N
Sbjct: 3367 -TGTPPPQINWLKNGLPLPLSSHIRLLAAGQVI--RIVRAQVSDVAVYTCVASNRAGVDN 3423

Query: 225  KSLYIELLPVPGAKKS 240
            K   +++   P    S
Sbjct: 3424 KHYNLQVFAPPNMDNS 3439



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 11/83 (13%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP--EVTLFQNRNRTAV--- 166
            D+   L I    ++    Y C +    G   + +H+ V V P  E  L    N+  V   
Sbjct: 1598 DKGQYLHIPRAQVSDSATYTCHVANVAGTAEKSFHVDVYVPPMIEGNLATPLNKQVVIAH 1657

Query: 167  -----CKAVAGKPAAHISWIPEG 184
                 CKA AG P+  ++W+ +G
Sbjct: 1658 SLTLECKA-AGNPSPILTWLKDG 1679



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP-------EVTLFQNRNRTAVCKA 169
            ++I    + H G Y C+     G+ HR   L V   P       E+ +  N      C+A
Sbjct: 3952 IEILATQLNHAGRYTCVARNAAGSAHRHVTLHVHEPPVIQPQPSELHVILNNPILLPCEA 4011

Query: 170  VAGKPAAHISWIPEG 184
              G P+  I+W  EG
Sbjct: 4012 -TGTPSPFITWQKEG 4025



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 93  NETKETNCTDERITWVSRPDQ--NSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 150
           N T + N  D R+   +R     N  L++++V     G Y C++ +  G+      L V 
Sbjct: 550 NLTWQRNDRDVRLAEPARIRTLANLSLELKSVKFNDAGEYHCMVSSEGGSSAASVFLTVQ 609

Query: 151 VTPEVTL------FQNRNRTAVCKAVAGKPAAHISW 180
             P+VT+      F   +  ++  +  G P   I+W
Sbjct: 610 EPPKVTVMPKNQSFTGGSEVSIMCSATGYPKPKIAW 645



 Score = 29.6 bits (65), Expect = 3.8
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 10/73 (13%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 167
            L I +V    +G Y C+ V   G   R Y+L+V V P          V++  N+     C
Sbjct: 1323 LVIASVTPYDNGEYICVAVNEAGTTERKYNLKVHVPPVIKDKEQVTNVSVLLNQLTNLFC 1382

Query: 168  KAVAGKPAAHISW 180
            + V G P+  I W
Sbjct: 1383 E-VEGTPSPIIMW 1394



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 10/66 (15%)

Query: 128  GYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVCKAVAGKPAAHI 178
            G Y C  +   G   + +++ VLV P         EV++  NR+    C+ V G P   I
Sbjct: 1427 GRYSCKAINIAGTSQKYFNIDVLVPPTIIGTNFPNEVSVVLNRDVALECQ-VKGTPFPDI 1485

Query: 179  SWIPEG 184
             W  +G
Sbjct: 1486 HWFKDG 1491



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 14/139 (10%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVT--------LFQNRNRTAVCK 168
            L+I +      G Y C+  +  G     Y + VLV P +         +    N   +  
Sbjct: 1697 LEIMSAQEIDRGQYICVATSVAGEKEIKYEVDVLVPPAIEGGDETSYFIVMVNNLLELDC 1756

Query: 169  AVAGKPAAHISWIPEGDCATKQEYWS---NGTVTVKSTCHWEVHNVSTVTCHVSHLTGNK 225
             V G P   I W+ +G    +++ +    NG   V +    +V N     C  ++  G+ 
Sbjct: 1757 HVTGSPPPTIMWLKDGQLIDERDGFKILLNGRKLVIAQA--QVSNTGLYRCMAANTAGDH 1814

Query: 226  SLYIEL-LPVPGAKKSAKL 243
                E+ + VP   KS+ L
Sbjct: 1815 KKEFEVTVHVPPTIKSSGL 1833



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVA----- 171
            L + +  I+  G Y C+ V   G   R   L+V V P +   +      + +AV      
Sbjct: 2068 LALTSAQISDTGRYTCVAVNAAGEKQRDIDLRVYVPPNIMGEEQNVSVLISQAVELLCQS 2127

Query: 172  -GKPAAHISWIPEGDCATKQEYWS-NGTVTVKSTCHWEVHNVSTVTCHVSHLTG 223
               P   ++W+ +G    K+   S +   +V      +V +    TC  +++ G
Sbjct: 2128 DAIPPPTLTWLKDGHPLLKKPGLSISENRSVLKIEDAQVQDTGRYTCEATNVAG 2181



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 17/141 (12%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP-------EVTLFQNRNRTAVCKA 169
            L I+   ++  G Y C  +   G   + +HL V V P       EV +    N   +   
Sbjct: 3115 LHIKKAEVSDTGQYVCRAINVAGRDDKNFHLNVYVPPSIEGPEREVIVETISNPVTLTCD 3174

Query: 170  VAGKPAAHISWIP-----EGDCATKQEYWSNGT-VTVKSTCHWEVHNVSTVTCHVSHLTG 223
              G P   I+W+      E   + +    S G+ + +  + H +  N    TC  S++ G
Sbjct: 3175 ATGIPPPTIAWLKNHKRIENSDSLEVRILSGGSKLQIARSQHSDSGN---YTCIASNMEG 3231

Query: 224  NKSLYIEL-LPVPGAKKSAKL 243
                Y  L + VP +   A++
Sbjct: 3232 KAQKYYFLSIQVPPSVAGAEI 3252



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 15/76 (19%)

Query: 118  QIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVCK 168
            Q+  VA+     Y C+     G  ++ Y+LQV   P         E+T+ +  + +  C 
Sbjct: 3404 QVSDVAV-----YTCVASNRAGVDNKHYNLQVFAPPNMDNSMGTEEITVLKGSSTSMAC- 3457

Query: 169  AVAGKPAAHISWIPEG 184
               G PA  ++W+ +G
Sbjct: 3458 ITDGTPAPSMAWLRDG 3473



 Score = 28.5 bits (62), Expect = 8.5
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 10/77 (12%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 167
            LQ+        G Y CI     G   + + L+VL  P         E+++  N      C
Sbjct: 3491 LQLLKAETEDSGKYTCIASNEAGEVSKHFILKVLEPPHINGSEEHEEISVIVNNPLELTC 3550

Query: 168  KAVAGKPAAHISWIPEG 184
             A +G PA  ++W+ +G
Sbjct: 3551 IA-SGIPAPKMTWMKDG 3566


>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
           sapiens]
          Length = 848

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 22/182 (12%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T ++ K+  + ++    DE+  +    D +S L I+ V    +  Y CI     G
Sbjct: 239 GFPEPTMSWTKDGEQIEQEE-DDEKYIF---SDDSSQLTIKKVDKNDEAEYICIAENKAG 294

Query: 140 NFHRGYHLQVLVTPEVTLFQNRNR-------TAVCKAVAGKPAAHISWIPEGDCATKQEY 192
                 HL+V   P++T  +N+         T  C+A +G P   I+W       + +E 
Sbjct: 295 EQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEA-SGDPIPSITWRTSTRNISSEEK 353

Query: 193 WSNGTVTVKSTCHWEVHNVSTV--------TCHVSHLTG--NKSLYIELLPVPGAKKSAK 242
             +G + V+S        + ++         C  S+  G  ++S+Y+E+   P  +    
Sbjct: 354 TLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVA 413

Query: 243 LY 244
           +Y
Sbjct: 414 VY 415



 Score = 32.7 bits (73), Expect = 0.45
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)

Query: 114 NSDLQIRTVAITHDGYYRC---IMVTPDGNFHRGYHLQVLVTPEVTLFQN---------R 161
           N+ LQIR +  T +G YRC   I+   + NF +   + V V P +   QN         +
Sbjct: 171 NNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIVNVPPTIQARQNIVNATANLGQ 229

Query: 162 NRTAVCKAVAGKPAAHISWIPEGDCATKQE 191
           + T VC A  G P   +SW  +G+   ++E
Sbjct: 230 SVTLVCDA-EGFPEPTMSWTKDGEQIEQEE 258



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 12/124 (9%)

Query: 115 SDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPE------VTLFQNRNRTAVCK 168
           S L ++++  T  G Y C      G   +  +L+V   P+      V  ++       C+
Sbjct: 368 SSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCE 427

Query: 169 AVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEV-----HNVSTVTCHVSHLTG 223
             A  P+A ISW  +G       Y +       S  + EV     ++     C   +  G
Sbjct: 428 VFA-YPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIG 486

Query: 224 NKSL 227
            +SL
Sbjct: 487 QESL 490


>gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo
           sapiens]
          Length = 761

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 22/182 (12%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T ++ K+  + ++    DE+  +    D +S L I+ V    +  Y CI     G
Sbjct: 239 GFPEPTMSWTKDGEQIEQEE-DDEKYIF---SDDSSQLTIKKVDKNDEAEYICIAENKAG 294

Query: 140 NFHRGYHLQVLVTPEVTLFQNRNR-------TAVCKAVAGKPAAHISWIPEGDCATKQEY 192
                 HL+V   P++T  +N+         T  C+A +G P   I+W       + +E 
Sbjct: 295 EQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEA-SGDPIPSITWRTSTRNISSEEK 353

Query: 193 WSNGTVTVKSTCHWEVHNVSTV--------TCHVSHLTG--NKSLYIELLPVPGAKKSAK 242
             +G + V+S        + ++         C  S+  G  ++S+Y+E+   P  +    
Sbjct: 354 TLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVA 413

Query: 243 LY 244
           +Y
Sbjct: 414 VY 415



 Score = 32.7 bits (73), Expect = 0.45
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)

Query: 114 NSDLQIRTVAITHDGYYRC---IMVTPDGNFHRGYHLQVLVTPEVTLFQN---------R 161
           N+ LQIR +  T +G YRC   I+   + NF +   + V V P +   QN         +
Sbjct: 171 NNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIVNVPPTIQARQNIVNATANLGQ 229

Query: 162 NRTAVCKAVAGKPAAHISWIPEGDCATKQE 191
           + T VC A  G P   +SW  +G+   ++E
Sbjct: 230 SVTLVCDA-EGFPEPTMSWTKDGEQIEQEE 258



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 12/124 (9%)

Query: 115 SDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPE------VTLFQNRNRTAVCK 168
           S L ++++  T  G Y C      G   +  +L+V   P+      V  ++       C+
Sbjct: 368 SSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCE 427

Query: 169 AVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEV-----HNVSTVTCHVSHLTG 223
             A  P+A ISW  +G       Y +       S  + EV     ++     C   +  G
Sbjct: 428 VFA-YPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIG 486

Query: 224 NKSL 227
            +SL
Sbjct: 487 QESL 490


>gi|66346706 neuronal growth regulator 1 [Homo sapiens]
          Length = 354

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 102 DERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV------ 155
           D R++  +   ++  LQI+ V +T DG Y C + T         HL V V P++      
Sbjct: 88  DPRVSISTLNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVPPKIYDISND 147

Query: 156 -TLFQNRNRTAVCKAVAGKPAAHISW 180
            T+ +  N T  C A  GKP   ISW
Sbjct: 148 MTVNEGTNVTLTCLA-TGKPEPSISW 172


>gi|54607118 leucine-rich repeats and immunoglobulin-like domains 1
           [Homo sapiens]
          Length = 1093

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 48/210 (22%), Positives = 78/210 (37%), Gaps = 24/210 (11%)

Query: 119 IRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVA------G 172
           I  V I   G Y C      G+      L VL TP + +       +V + VA      G
Sbjct: 659 ITDVKIDDAGVYSCTAQNSAGSISANATLTVLETPSLVVPLEDRVVSVGETVALQCKATG 718

Query: 173 KPAAHISWIPEGD---CATKQEYWS--NGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSL 227
            P   I+W  +GD     T++ + +  N  + V++       +    TC +S+  G +  
Sbjct: 719 NPPPRITWF-KGDRPLSLTERHHLTPDNQLLVVQNVV---AEDAGRYTCEMSNTLGTERA 774

Query: 228 YIEL--LPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKTESTPVVEE 285
           + +L  LP  G +K       + I  +  + +   +W+  +   RK    K+E   V   
Sbjct: 775 HSQLSVLPAAGCRKDGTTVGIFTIAVVSSIVLTSLVWVCIIYQTRK----KSEEYSVTNT 830

Query: 286 DEM---QPYASYTEKNNPLYDTTNKVKASE 312
           DE        SY      L D    V  +E
Sbjct: 831 DETVVPPDVPSYLSSQGTLSDRQETVVRTE 860



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 16/113 (14%)

Query: 85  TKAYKKETNETKETNCTDERITWVSRPD-----QNSDLQIRTVAITHDGYYRCIMVTPDG 139
           T A+KK+ NE   TN   E    V   D       + L +R V   H+G Y+C++    G
Sbjct: 527 TFAWKKD-NEVL-TNADMENFVHVHAQDGEVMEYTTILHLRQVTFGHEGRYQCVITNHFG 584

Query: 140 N-FHRGYHLQVLVTP-------EVTLFQNRNRTAVCKAVAGKPAAHISWIPEG 184
           + +     L V V P       ++T+         C A  G P   I+W  +G
Sbjct: 585 STYSHKARLTVNVLPSFTKTPHDITIRTTTMARLEC-AATGHPNPQIAWQKDG 636


>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3874

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRN 162
            +Q   LQ+  V     G Y C+ V+  G   R + L V+  P         E++L     
Sbjct: 2262 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPHIEDSGQPTELSLTPGAP 2321

Query: 163  RTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGT 197
               +C A  G P  +I+W  +G   T+ E  S  T
Sbjct: 2322 MELLCDA-QGTPQPNITWHKDGQALTRLENNSRAT 2355



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 22/172 (12%)

Query: 72  ITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYR 131
           +  E + RG PS T ++  E     E+N  + R+         S L++ +      G Y 
Sbjct: 423 VALECVARGHPSPTLSWHHEGLPVAESN--ESRLE-----TDGSVLRLESPGEASSGLYS 475

Query: 132 CIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAV---------CKAVAGKPAAHISWIP 182
           C+  +P G     Y ++V V P++ + +   +            C+A +G P   I W+ 
Sbjct: 476 CVASSPAGEAVLQYSVEVQVPPQLLVAEGLGQVTTIVGQPLELPCQA-SGSPVPTIQWLQ 534

Query: 183 EGDCATK---QEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIEL 231
            G  A +    +  S GT       H E+ +     C  ++  G     +E+
Sbjct: 535 NGRPAEELAGVQVASQGTTL--HIDHVELDHSGLFACQATNEAGTAGAEVEV 584



 Score = 37.0 bits (84), Expect = 0.024
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP------------EVTLFQNRNRT 164
            LQ+    ++  G+Y CI     G   + + L VL+ P            EVT+  N   +
Sbjct: 1310 LQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPIS 1369

Query: 165  AVCKAVAGKPAAHISWIPEGDC--ATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLT 222
             +C+A+A  P+ +I+W+ +G    A++      GT  ++   + +  +    TC V++  
Sbjct: 1370 LICEALA-FPSPNITWMKDGAPFEASRNIQLLPGTHGLQ-ILNAQKEDAGQYTCVVTNEL 1427

Query: 223  GN--KSLYIELLPVPGAKKSAKL 243
            G   K+ ++E+L  P   K   L
Sbjct: 1428 GEAVKNYHVEVLIPPSISKDDPL 1450



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 15/122 (12%)

Query: 117 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-------TLFQNRNRTAVCKA 169
           LQI  V +  +G Y C      G   R   L+VLV P +        + +N + T  C A
Sbjct: 659 LQIEKVDLRDEGIYTCAATNLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLECLA 718

Query: 170 VAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTC----HWEVHNVSTVTCHVSHLTGNK 225
            +G P   +SW       +    W   TV+V          ++ +  +  C  S++ G+ 
Sbjct: 719 -SGVPPPDVSWFKGHQPVSS---WMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAGST 774

Query: 226 SL 227
            L
Sbjct: 775 EL 776



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 169
            L+I  V +   G + C+  +P G   R + LQV V P +   + +N   V +        
Sbjct: 2178 LRISKVQLADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPC 2237

Query: 170  -VAGKPAAHISWIPEGD 185
               G P   +SW+ +G+
Sbjct: 2238 EARGVPLPLVSWMKDGE 2254



 Score = 33.5 bits (75), Expect = 0.26
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 169
            L ++ +  +  G Y C+   P G   R + + VLV P +    + + T V +        
Sbjct: 2084 LVLKGLRASDAGAYTCVAHNPAGEDARLHTVNVLVPPTIKQGADGSGTLVSRPGELVTMV 2143

Query: 170  --VAGKPAAHISWIPEG 184
              V G P  H+SW+ +G
Sbjct: 2144 CPVRGSPPIHVSWLKDG 2160



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 117 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 167
           L+I    +  +G Y+C+  +P G   R + L+V   P         EV + ++     +C
Sbjct: 274 LRITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLVQLLC 333

Query: 168 KAVAGKPAAHISWIPEG---DCATKQEYWSNG 196
           +A  G P  +I+W  +G     +TK  Y   G
Sbjct: 334 EA-RGVPTPNITWFKDGALLPTSTKVVYTRGG 364



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPE----------VTLFQNR 161
            +Q   L +      H G Y C+     G   R + L VLV PE          +T   + 
Sbjct: 1118 NQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHS 1177

Query: 162  NRTAVCKAVAGKPAAHISW 180
              T +C+A+ G P   I W
Sbjct: 1178 PLTLLCEAM-GIPPPAIRW 1195



 Score = 32.7 bits (73), Expect = 0.45
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 14/127 (11%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR-------NRTAVCKA 169
            LQ+    +   G+Y C  +   G   + Y+L V V P   L ++        + T++   
Sbjct: 935  LQVDRADVWDAGHYTCEALNQAGRSEKHYNLNVWVAPVFPLRESHTLTVREGHPTSLSCE 994

Query: 170  VAGKPAAHISWIPE-----GDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGN 224
              G P   ISW  +     G+ A  Q   + G +        ++    T TC  S++ GN
Sbjct: 995  CRGVPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQA--QLAQEGTYTCECSNVVGN 1052

Query: 225  KSLYIEL 231
             S  ++L
Sbjct: 1053 SSQDLQL 1059



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 117 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL--------FQNRNRTAVCK 168
           L+I    ++  G YRC+     G+    Y L+V V P +TL          N      C 
Sbjct: 750 LRIEQAQLSDAGSYRCVASNVAGSTELRYGLRVNVPPRITLPPSLPGPVLVNTPVRLTCN 809

Query: 169 AVAGKPAAHISWIPEGD 185
           A  G P+  + W+ +G+
Sbjct: 810 A-TGAPSPTLMWLKDGN 825



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 128  GYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCA 187
            G Y C+     G   R + ++VLV P +   +N +   V K + G+  AH+     G   
Sbjct: 1228 GLYSCLASNEAGEARRNFSVEVLVPPSI---ENEDLEEVIKVLDGQ-TAHLMCNVTGHPQ 1283

Query: 188  TKQEYWSNGTVTVKSTCH 205
             K  ++ +G    +   H
Sbjct: 1284 PKLTWFKDGRPLARGDAH 1301



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 15/86 (17%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP--------------EVTLFQNRN 162
            LQI        G Y C++    G   + YH++VL+ P              EV    N  
Sbjct: 1406 LQILNAQKEDAGQYTCVVTNELGEAVKNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNST 1465

Query: 163  RTAVCKAVAGKPAAHISWIPEGDCAT 188
             T  C++ A  P   I W  +G   T
Sbjct: 1466 LTLECESWAVPPPT-IRWYKDGQPVT 1490


>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 5065

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRN 162
            +Q   LQ+  V     G Y C+ V+  G   R + L V+  P         E++L     
Sbjct: 3453 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPHIEDSGQPTELSLTPGAP 3512

Query: 163  RTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGT 197
               +C A  G P  +I+W  +G   T+ E  S  T
Sbjct: 3513 MELLCDA-QGTPQPNITWHKDGQALTRLENNSRAT 3546



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 22/172 (12%)

Query: 72   ITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYR 131
            +  E + RG PS T ++  E     E+N  + R+         S L++ +      G Y 
Sbjct: 1614 VALECVARGHPSPTLSWHHEGLPVAESN--ESRLE-----TDGSVLRLESPGEASSGLYS 1666

Query: 132  CIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAV---------CKAVAGKPAAHISWIP 182
            C+  +P G     Y ++V V P++ + +   +            C+A +G P   I W+ 
Sbjct: 1667 CVASSPAGEAVLQYSVEVQVPPQLLVAEGLGQVTTIVGQPLELPCQA-SGSPVPTIQWLQ 1725

Query: 183  EGDCATK---QEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIEL 231
             G  A +    +  S GT       H E+ +     C  ++  G     +E+
Sbjct: 1726 NGRPAEELAGVQVASQGTTL--HIDHVELDHSGLFACQATNEAGTAGAEVEV 1775



 Score = 37.0 bits (84), Expect = 0.024
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP------------EVTLFQNRNRT 164
            LQ+    ++  G+Y CI     G   + + L VL+ P            EVT+  N   +
Sbjct: 2501 LQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPIS 2560

Query: 165  AVCKAVAGKPAAHISWIPEGDC--ATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLT 222
             +C+A+A  P+ +I+W+ +G    A++      GT  ++   + +  +    TC V++  
Sbjct: 2561 LICEALA-FPSPNITWMKDGAPFEASRNIQLLPGTHGLQ-ILNAQKEDAGQYTCVVTNEL 2618

Query: 223  GN--KSLYIELLPVPGAKKSAKL 243
            G   K+ ++E+L  P   K   L
Sbjct: 2619 GEAVKNYHVEVLIPPSISKDDPL 2641



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 15/122 (12%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-------TLFQNRNRTAVCKA 169
            LQI  V +  +G Y C      G   R   L+VLV P +        + +N + T  C A
Sbjct: 1850 LQIEKVDLRDEGIYTCAATNLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLECLA 1909

Query: 170  VAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTC----HWEVHNVSTVTCHVSHLTGNK 225
             +G P   +SW       +    W   TV+V          ++ +  +  C  S++ G+ 
Sbjct: 1910 -SGVPPPDVSWFKGHQPVSS---WMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAGST 1965

Query: 226  SL 227
             L
Sbjct: 1966 EL 1967



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 169
            L+I  V +   G + C+  +P G   R + LQV V P +   + +N   V +        
Sbjct: 3369 LRISKVQLADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPC 3428

Query: 170  -VAGKPAAHISWIPEGD 185
               G P   +SW+ +G+
Sbjct: 3429 EARGVPLPLVSWMKDGE 3445



 Score = 33.5 bits (75), Expect = 0.26
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 169
            L ++ +  +  G Y C+   P G   R + + VLV P +    + + T V +        
Sbjct: 3275 LVLKGLRASDAGAYTCVAHNPAGEDARLHTVNVLVPPTIKQGADGSGTLVSRPGELVTMV 3334

Query: 170  --VAGKPAAHISWIPEG 184
              V G P  H+SW+ +G
Sbjct: 3335 CPVRGSPPIHVSWLKDG 3351



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 167
            L+I    +  +G Y+C+  +P G   R + L+V   P         EV + ++     +C
Sbjct: 1465 LRITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLVQLLC 1524

Query: 168  KAVAGKPAAHISWIPEG---DCATKQEYWSNG 196
            +A  G P  +I+W  +G     +TK  Y   G
Sbjct: 1525 EA-RGVPTPNITWFKDGALLPTSTKVVYTRGG 1555



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 14/127 (11%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR-------NRTAVCKA 169
            LQ+    +   G+Y C  +   G+  + Y+L V V P   L ++        + T++   
Sbjct: 2126 LQVDRADVWDAGHYTCEALNQAGHSEKHYNLNVWVAPVFPLRESHTLTVREGHPTSLSCE 2185

Query: 170  VAGKPAAHISWIPE-----GDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGN 224
              G P   ISW  +     G+ A  Q   + G +        ++    T TC  S++ GN
Sbjct: 2186 CRGVPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQA--QLAQEGTYTCECSNVVGN 2243

Query: 225  KSLYIEL 231
             S  ++L
Sbjct: 2244 SSQDLQL 2250



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPE----------VTLFQNR 161
            +Q   L +      H G Y C+     G   R + L VLV PE          +T   + 
Sbjct: 2309 NQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHS 2368

Query: 162  NRTAVCKAVAGKPAAHISW 180
              T +C+A+ G P   I W
Sbjct: 2369 PLTLLCEAM-GIPPPAIRW 2386



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL--------FQNRNRTAVCK 168
            L+I    ++  G YRC+     G+    Y L+V V P +TL          N      C 
Sbjct: 1941 LRIEQAQLSDAGSYRCVASNVAGSTELRYGLRVNVPPRITLPPSLPGPVLVNTPVRLTCN 2000

Query: 169  AVAGKPAAHISWIPEGD 185
            A  G P+  + W+ +G+
Sbjct: 2001 A-TGAPSPTLMWLKDGN 2016



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 114  NSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAV--- 170
            +  L++  V +   G+Y C    P G+    Y L V V P+V       +  V +A+   
Sbjct: 1081 SGSLRLAQVQVGDSGHYECTASNPAGSASHRYVLGVQVPPQVQPGPRVLKVLVGEALDLN 1140

Query: 171  ---AGKPAAHISWIPEG 184
                G P   +SW  +G
Sbjct: 1141 CVAEGNPEPQLSWSKDG 1157



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 117 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL------FQNRNRTAVCKAV 170
           L+I  +  T  G Y+C+    +G       L V   P+V++      F       V  + 
Sbjct: 572 LEISGIIPTDGGRYQCVASNANGVTRASVWLLVREAPQVSIHTSSQHFSQGVEVKVSCSA 631

Query: 171 AGKPAAHISWIPE 183
           +G P  HISW  E
Sbjct: 632 SGYPTPHISWSRE 644



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 126  HDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-----TLFQNRNRTAVCKAVA-GKPAAHIS 179
            H G Y C+     G+ HR   L V V P +         N    A    VA G PA  I+
Sbjct: 949  HAGRYSCVATNTAGSQHRDVELVVQVPPRIHPTATHHITNEGVPASLPCVASGVPAPTIT 1008

Query: 180  WIPEGDCATKQ 190
            W  E +  T +
Sbjct: 1009 WTKETNALTSR 1019



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 128  GYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCA 187
            G Y C+     G   R + ++VLV P +   +N +   V K + G+  AH+     G   
Sbjct: 2419 GLYSCLASNEAGEARRNFSVEVLVPPSI---ENEDLEEVIKVLDGQ-TAHLMCNVTGHPQ 2474

Query: 188  TKQEYWSNGTVTVKSTCH 205
             K  ++ +G    +   H
Sbjct: 2475 PKLTWFKDGRPLARGDAH 2492



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 15/86 (17%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP--------------EVTLFQNRN 162
            LQI        G Y C++    G   + YH++VL+ P              EV    N  
Sbjct: 2597 LQILNAQKEDAGQYTCVVTNELGEAVKNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNST 2656

Query: 163  RTAVCKAVAGKPAAHISWIPEGDCAT 188
             T  C++ A  P   I W  +G   T
Sbjct: 2657 LTLECESWAVPPPT-IRWYKDGQPVT 2681


>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3783

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRN 162
            +Q   LQ+  V     G Y C+ V+  G   R + L V+  P         E++L     
Sbjct: 2171 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPHIEDSGQPTELSLTPGAP 2230

Query: 163  RTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGT 197
               +C A  G P  +I+W  +G   T+ E  S  T
Sbjct: 2231 MELLCDA-QGTPQPNITWHKDGQALTRLENNSRAT 2264



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 22/172 (12%)

Query: 72  ITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYR 131
           +  E + RG PS T ++  E     E+N  + R+         S L++ +      G Y 
Sbjct: 332 VALECVARGHPSPTLSWHHEGLPVAESN--ESRLE-----TDGSVLRLESPGEASSGLYS 384

Query: 132 CIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAV---------CKAVAGKPAAHISWIP 182
           C+  +P G     Y ++V V P++ + +   +            C+A +G P   I W+ 
Sbjct: 385 CVASSPAGEAVLQYSVEVQVPPQLLVAEGLGQVTTIVGQPLELPCQA-SGSPVPTIQWLQ 443

Query: 183 EGDCATK---QEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIEL 231
            G  A +    +  S GT       H E+ +     C  ++  G     +E+
Sbjct: 444 NGRPAEELAGVQVASQGTTL--HIDHVELDHSGLFACQATNEAGTAGAEVEV 493



 Score = 37.0 bits (84), Expect = 0.024
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP------------EVTLFQNRNRT 164
            LQ+    ++  G+Y CI     G   + + L VL+ P            EVT+  N   +
Sbjct: 1219 LQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPIS 1278

Query: 165  AVCKAVAGKPAAHISWIPEGDC--ATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLT 222
             +C+A+A  P+ +I+W+ +G    A++      GT  ++   + +  +    TC V++  
Sbjct: 1279 LICEALA-FPSPNITWMKDGAPFEASRNIQLLPGTHGLQ-ILNAQKEDAGQYTCVVTNEL 1336

Query: 223  GN--KSLYIELLPVPGAKKSAKL 243
            G   K+ ++E+L  P   K   L
Sbjct: 1337 GEAVKNYHVEVLIPPSISKDDPL 1359



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 15/122 (12%)

Query: 117 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-------TLFQNRNRTAVCKA 169
           LQI  V +  +G Y C      G   R   L+VLV P +        + +N + T  C A
Sbjct: 568 LQIEKVDLRDEGIYTCAATNLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLECLA 627

Query: 170 VAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTC----HWEVHNVSTVTCHVSHLTGNK 225
            +G P   +SW       +    W   TV+V          ++ +  +  C  S++ G+ 
Sbjct: 628 -SGVPPPDVSWFKGHQPVSS---WMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAGST 683

Query: 226 SL 227
            L
Sbjct: 684 EL 685



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 169
            L+I  V +   G + C+  +P G   R + LQV V P +   + +N   V +        
Sbjct: 2087 LRISKVQLADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPC 2146

Query: 170  -VAGKPAAHISWIPEGD 185
               G P   +SW+ +G+
Sbjct: 2147 EARGVPLPLVSWMKDGE 2163



 Score = 33.5 bits (75), Expect = 0.26
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 169
            L ++ +  +  G Y C+   P G   R + + VLV P +    + + T V +        
Sbjct: 1993 LVLKGLRASDAGAYTCVAHNPAGEDARLHTVNVLVPPTIKQGADGSGTLVSRPGELVTMV 2052

Query: 170  --VAGKPAAHISWIPEG 184
              V G P  H+SW+ +G
Sbjct: 2053 CPVRGSPPIHVSWLKDG 2069



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 117 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 167
           L+I    +  +G Y+C+  +P G   R + L+V   P         EV + ++     +C
Sbjct: 183 LRITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLVQLLC 242

Query: 168 KAVAGKPAAHISWIPEG---DCATKQEYWSNG 196
           +A  G P  +I+W  +G     +TK  Y   G
Sbjct: 243 EA-RGVPTPNITWFKDGALLPTSTKVVYTRGG 273



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPE----------VTLFQNR 161
            +Q   L +      H G Y C+     G   R + L VLV PE          +T   + 
Sbjct: 1027 NQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHS 1086

Query: 162  NRTAVCKAVAGKPAAHISW 180
              T +C+A+ G P   I W
Sbjct: 1087 PLTLLCEAM-GIPPPAIRW 1104



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 117 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL--------FQNRNRTAVCK 168
           L+I    ++  G YRC+     G+    Y L+V V P +TL          N      C 
Sbjct: 659 LRIEQAQLSDAGSYRCVASNVAGSTELRYGLRVNVPPRITLPPSLPGPVLVNTPVRLTCN 718

Query: 169 AVAGKPAAHISWIPEGD 185
           A  G P+  + W+ +G+
Sbjct: 719 A-TGAPSPTLMWLKDGN 734



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 14/127 (11%)

Query: 117 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR-------NRTAVCKA 169
           LQ+    +   G+Y C  +   G+  + Y+L V V P   L ++        + T +   
Sbjct: 844 LQVDRADVWDAGHYTCEALNQAGHSEKHYNLNVWVAPVFPLRESHTLTVREGHPTRLSCE 903

Query: 170 VAGKPAAHISWIPE-----GDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGN 224
             G P   ISW  +     G+ A  Q   + G +        ++    T TC  S++ GN
Sbjct: 904 CRGVPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQA--QLAQEGTYTCECSNVVGN 961

Query: 225 KSLYIEL 231
            S  ++L
Sbjct: 962 SSQDLQL 968



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 128  GYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCA 187
            G Y C+     G   R + ++VLV P +   +N +   V K + G+  AH+     G   
Sbjct: 1137 GLYSCLASNEAGEARRNFSVEVLVPPSI---ENEDLEEVIKVLDGQ-TAHLMCNVTGHPQ 1192

Query: 188  TKQEYWSNGTVTVKSTCH 205
             K  ++ +G    +   H
Sbjct: 1193 PKLTWFKDGRPLARGDAH 1210



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 15/86 (17%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP--------------EVTLFQNRN 162
            LQI        G Y C++    G   + YH++VL+ P              EV    N  
Sbjct: 1315 LQILNAQKEDAGQYTCVVTNELGEAVKNYHVEVLIPPSISKDDPLAEVGVKEVKTKVNST 1374

Query: 163  RTAVCKAVAGKPAAHISWIPEGDCAT 188
             T  C++ A  P   I W  +G   T
Sbjct: 1375 LTLECESWAVPPPT-IRWYKDGQPVT 1399


>gi|148664211 immunoglobulin superfamily, member 4D isoform 2 [Homo
           sapiens]
          Length = 414

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 18/139 (12%)

Query: 102 DERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR 161
           D R   ++       + +  V+I+ +G Y C + T D        + VLV P   +   +
Sbjct: 94  DSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYT-DPPQESYTTITVLVPPRNLMIDIQ 152

Query: 162 NRTAV--------CKAVAGKPAAHISWI---PEGDCATKQEYWSNGTVTVKSTCHWEVHN 210
             TAV        C A+A KPA  I W     E    ++ E WS+   TV S    +VH 
Sbjct: 153 KDTAVEGEEIEVNCTAMASKPATTIRWFKGNTELKGKSEVEEWSD-MYTVTSQLMLKVHK 211

Query: 211 VS---TVTCHVSH--LTGN 224
                 V C V H  +TGN
Sbjct: 212 EDDGVPVICQVEHPAVTGN 230


>gi|148664190 immunoglobulin superfamily, member 4D isoform 1 [Homo
           sapiens]
          Length = 442

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 18/139 (12%)

Query: 102 DERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR 161
           D R   ++       + +  V+I+ +G Y C + T D        + VLV P   +   +
Sbjct: 94  DSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYT-DPPQESYTTITVLVPPRNLMIDIQ 152

Query: 162 NRTAV--------CKAVAGKPAAHISWI---PEGDCATKQEYWSNGTVTVKSTCHWEVHN 210
             TAV        C A+A KPA  I W     E    ++ E WS+   TV S    +VH 
Sbjct: 153 KDTAVEGEEIEVNCTAMASKPATTIRWFKGNTELKGKSEVEEWSD-MYTVTSQLMLKVHK 211

Query: 211 VS---TVTCHVSH--LTGN 224
                 V C V H  +TGN
Sbjct: 212 EDDGVPVICQVEHPAVTGN 230


>gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]
          Length = 352

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 19/179 (10%)

Query: 42  LAEVNTSWPVKMATNAVLCCP---PIALRNLIIITWEIILRGQPSCTKAYKKETNETKET 98
           + +VN S    + T+ VL C    P+    +  +TW+    G       Y      +   
Sbjct: 32  VVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLA 91

Query: 99  NCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTP---- 153
               ER+ ++     +  +++  + +  +G Y C   T P GN     +L V+  P    
Sbjct: 92  PYR-ERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWI 150

Query: 154 ---EVTLFQNRNR-----TAVCKAVAGKPAAHISWIP--EGDCATKQEYWSNGTVTVKS 202
              +  L   + +      A C +  GKP + +SW    +G+   ++    NGTVTV S
Sbjct: 151 EGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVIS 209


>gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]
          Length = 458

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 19/179 (10%)

Query: 42  LAEVNTSWPVKMATNAVLCCP---PIALRNLIIITWEIILRGQPSCTKAYKKETNETKET 98
           + +VN S    + T+ VL C    P+    +  +TW+    G       Y      +   
Sbjct: 32  VVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLA 91

Query: 99  NCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTP---- 153
               ER+ ++     +  +++  + +  +G Y C   T P GN     +L V+  P    
Sbjct: 92  PYR-ERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWI 150

Query: 154 ---EVTLFQNRNR-----TAVCKAVAGKPAAHISWIP--EGDCATKQEYWSNGTVTVKS 202
              +  L   + +      A C +  GKP + +SW    +G+   ++    NGTVTV S
Sbjct: 151 EGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVIS 209


>gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]
          Length = 517

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 19/179 (10%)

Query: 42  LAEVNTSWPVKMATNAVLCCP---PIALRNLIIITWEIILRGQPSCTKAYKKETNETKET 98
           + +VN S    + T+ VL C    P+    +  +TW+    G       Y      +   
Sbjct: 32  VVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLA 91

Query: 99  NCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTP---- 153
               ER+ ++     +  +++  + +  +G Y C   T P GN     +L V+  P    
Sbjct: 92  PYR-ERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWI 150

Query: 154 ---EVTLFQNRNR-----TAVCKAVAGKPAAHISWIP--EGDCATKQEYWSNGTVTVKS 202
              +  L   + +      A C +  GKP + +SW    +G+   ++    NGTVTV S
Sbjct: 151 EGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVIS 209


>gi|33519481 neural cell adhesion molecule 2 precursor [Homo
           sapiens]
          Length = 837

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 19/149 (12%)

Query: 114 NSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV------TLFQNRNRTAVC 167
           N++L +R +  +  G Y C      G   +   LQV V P +      T ++N   T VC
Sbjct: 263 NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVC 322

Query: 168 KAVAGKPAAHISW--IPEGDCATKQEYWSNGTVTVK-----STCH---WEVHNVSTVTCH 217
            A  G+P   I+W    +G   T+ +   +G + VK     S+ H    ++ +     C 
Sbjct: 323 DA-EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCE 381

Query: 218 VSHLTG--NKSLYIELLPVPGAKKSAKLY 244
            +   G   KS+Y+++   P    +  +Y
Sbjct: 382 AASRIGGHQKSMYLDIEYAPKFISNQTIY 410



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 20/143 (13%)

Query: 75  EIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCI- 133
           E++ R   S   A     +  + T  +D R   ++    N++LQI  +  + +G YRC  
Sbjct: 133 EVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA----NNNLQILNINKSDEGIYRCEG 188

Query: 134 MVTPDGNF-HRGYHLQVLVTPEVTLFQ---------NRNRTAVCKAVAGKPAAHISWIPE 183
            V   G    R   + V V P +++ Q             T  C+A +G P   ISW   
Sbjct: 189 RVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFRN 247

Query: 184 GDCATKQEYW----SNGTVTVKS 202
           G    + E +    SN  +TV++
Sbjct: 248 GKLIEENEKYILKGSNTELTVRN 270


>gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo
           sapiens]
          Length = 1248

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 43/206 (20%), Positives = 73/206 (35%), Gaps = 30/206 (14%)

Query: 108 VSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQV------LVTPEVTLFQNR 161
           V+  + N  LQ+  V    DG YRC+     G+    Y++ V      L  P+  L+   
Sbjct: 283 VTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPG 342

Query: 162 NRTAVCKAVAGKPAAHISW----IPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 217
               +   V G+P   ++W    IP  + A  Q+Y       + S        V+     
Sbjct: 343 ETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAR 402

Query: 218 VSH--LTGNKSLYIELLPVPGAKKSAKLYI------PYIILTIIILTIVGFIWLLKVNGC 269
             H  L  N  +Y+  LP        + Y+       Y++       +    WL      
Sbjct: 403 NRHGLLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL------ 456

Query: 270 RKYKLNKTESTPVVEEDEMQPYASYT 295
                   + T V++++   PYA+ T
Sbjct: 457 ------DEDGTTVLQDERFFPYANGT 476


>gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo
           sapiens]
          Length = 1253

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 43/206 (20%), Positives = 73/206 (35%), Gaps = 30/206 (14%)

Query: 108 VSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQV------LVTPEVTLFQNR 161
           V+  + N  LQ+  V    DG YRC+     G+    Y++ V      L  P+  L+   
Sbjct: 288 VTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPG 347

Query: 162 NRTAVCKAVAGKPAAHISW----IPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 217
               +   V G+P   ++W    IP  + A  Q+Y       + S        V+     
Sbjct: 348 ETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAR 407

Query: 218 VSH--LTGNKSLYIELLPVPGAKKSAKLYI------PYIILTIIILTIVGFIWLLKVNGC 269
             H  L  N  +Y+  LP        + Y+       Y++       +    WL      
Sbjct: 408 NRHGLLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL------ 461

Query: 270 RKYKLNKTESTPVVEEDEMQPYASYT 295
                   + T V++++   PYA+ T
Sbjct: 462 ------DEDGTTVLQDERFFPYANGT 481


>gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo
           sapiens]
          Length = 1257

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 43/206 (20%), Positives = 73/206 (35%), Gaps = 30/206 (14%)

Query: 108 VSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQV------LVTPEVTLFQNR 161
           V+  + N  LQ+  V    DG YRC+     G+    Y++ V      L  P+  L+   
Sbjct: 288 VTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPG 347

Query: 162 NRTAVCKAVAGKPAAHISW----IPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 217
               +   V G+P   ++W    IP  + A  Q+Y       + S        V+     
Sbjct: 348 ETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAR 407

Query: 218 VSH--LTGNKSLYIELLPVPGAKKSAKLYI------PYIILTIIILTIVGFIWLLKVNGC 269
             H  L  N  +Y+  LP        + Y+       Y++       +    WL      
Sbjct: 408 NRHGLLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL------ 461

Query: 270 RKYKLNKTESTPVVEEDEMQPYASYT 295
                   + T V++++   PYA+ T
Sbjct: 462 ------DEDGTTVLQDERFFPYANGT 481


>gi|209413732 poliovirus receptor isoform delta [Homo sapiens]
          Length = 392

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 18/124 (14%)

Query: 113 QNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTPEVTLFQNRNRT------- 164
           +N+ L++  + +  +G Y C+ VT P G+      L+VL  P+ T    + +        
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163

Query: 165 AVCKAVAGKPAAHISWIPE--GDCATKQ-EYWSNGTVTVKSTCHWEVHNVS-----TVTC 216
           A C +  G+P A I+W  +  G   T Q   + +GTVTV S   W +   S      VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221

Query: 217 HVSH 220
            V H
Sbjct: 222 KVEH 225


>gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]
          Length = 364

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 18/124 (14%)

Query: 113 QNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTPEVTLFQNRNRT------- 164
           +N+ L++  + +  +G Y C+ VT P G+      L+VL  P+ T    + +        
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163

Query: 165 AVCKAVAGKPAAHISWIPE--GDCATKQ-EYWSNGTVTVKSTCHWEVHNVS-----TVTC 216
           A C +  G+P A I+W  +  G   T Q   + +GTVTV S   W +   S      VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221

Query: 217 HVSH 220
            V H
Sbjct: 222 KVEH 225


>gi|209413728 poliovirus receptor isoform beta [Homo sapiens]
          Length = 372

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 18/124 (14%)

Query: 113 QNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTPEVTLFQNRNRT------- 164
           +N+ L++  + +  +G Y C+ VT P G+      L+VL  P+ T    + +        
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163

Query: 165 AVCKAVAGKPAAHISWIPE--GDCATKQ-EYWSNGTVTVKSTCHWEVHNVS-----TVTC 216
           A C +  G+P A I+W  +  G   T Q   + +GTVTV S   W +   S      VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221

Query: 217 HVSH 220
            V H
Sbjct: 222 KVEH 225


>gi|209413726 poliovirus receptor isoform alpha [Homo sapiens]
          Length = 417

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 18/124 (14%)

Query: 113 QNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTPEVTLFQNRNRT------- 164
           +N+ L++  + +  +G Y C+ VT P G+      L+VL  P+ T    + +        
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163

Query: 165 AVCKAVAGKPAAHISWIPE--GDCATKQ-EYWSNGTVTVKSTCHWEVHNVS-----TVTC 216
           A C +  G+P A I+W  +  G   T Q   + +GTVTV S   W +   S      VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221

Query: 217 HVSH 220
            V H
Sbjct: 222 KVEH 225


>gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo
           sapiens]
          Length = 858

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 12/108 (11%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T ++ K+  + ++    DE+  +    D +S L I+ V    +  Y CI     G
Sbjct: 239 GFPEPTMSWTKDGEQIEQEE-DDEKYIF---SDDSSQLTIKKVDKNDEAEYICIAENKAG 294

Query: 140 NFHRGYHLQVLVTPEVTLFQNRNR-------TAVCKAVAGKPAAHISW 180
                 HL+V   P++T  +N+         T  C+A +G P   I+W
Sbjct: 295 EQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEA-SGDPIPSITW 341



 Score = 32.7 bits (73), Expect = 0.45
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)

Query: 114 NSDLQIRTVAITHDGYYRC---IMVTPDGNFHRGYHLQVLVTPEVTLFQN---------R 161
           N+ LQIR +  T +G YRC   I+   + NF +   + V V P +   QN         +
Sbjct: 171 NNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIVNVPPTIQARQNIVNATANLGQ 229

Query: 162 NRTAVCKAVAGKPAAHISWIPEGDCATKQE 191
           + T VC A  G P   +SW  +G+   ++E
Sbjct: 230 SVTLVCDA-EGFPEPTMSWTKDGEQIEQEE 258



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 20/169 (11%)

Query: 72  ITWEIILRGQPSCTKAY--KKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGY 129
           ITW    R   S  KA   + E  ET + +        V    + S L ++++  T  G 
Sbjct: 339 ITWRTSTRNISSEEKASWTRPEKQETLDGHMV------VRSHARVSSLTLKSIQYTDAGE 392

Query: 130 YRCIMVTPDGNFHRGYHLQVLVTPE------VTLFQNRNRTAVCKAVAGKPAAHISWIPE 183
           Y C      G   +  +L+V   P+      V  ++       C+  A  P+A ISW  +
Sbjct: 393 YICTASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFA-YPSATISWFRD 451

Query: 184 GDCATKQEYWSNGTVTVKSTCHWEV-----HNVSTVTCHVSHLTGNKSL 227
           G       Y +       S  + EV     ++     C   +  G +SL
Sbjct: 452 GQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESL 500


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,604,857
Number of Sequences: 37866
Number of extensions: 539878
Number of successful extensions: 1671
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 1448
Number of HSP's gapped (non-prelim): 246
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.