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Search of human proteins with 254039612
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo
sapiens]
(649 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo s... 1318 0.0
gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo s... 1311 0.0
gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo s... 1249 0.0
gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo sa... 1241 0.0
gi|150010540 FERM domain containing 4B [Homo sapiens] 140 5e-33
gi|116063562 FERM domain containing 4A [Homo sapiens] 125 2e-28
gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens] 96 1e-19
gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens] 96 1e-19
gi|163965366 nascent polypeptide-associated complex alpha subuni... 75 2e-13
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 65 1e-10
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 65 1e-10
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 61 4e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 61 4e-09
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 58 3e-08
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 58 3e-08
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 58 3e-08
gi|110832843 TBP-associated factor 4 [Homo sapiens] 56 9e-08
gi|160707881 formin 2 [Homo sapiens] 55 2e-07
gi|145309324 FH2 domain containing 1 [Homo sapiens] 54 3e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 53 8e-07
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 52 1e-06
gi|40353727 synaptopodin isoform A [Homo sapiens] 52 2e-06
gi|33286436 gametogenetin [Homo sapiens] 51 3e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 50 5e-06
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 50 6e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 50 8e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 49 1e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 49 1e-05
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 49 1e-05
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 48 3e-05
>gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo
sapiens]
Length = 649
Score = 1318 bits (3412), Expect = 0.0
Identities = 649/649 (100%), Positives = 649/649 (100%)
Query: 1 MEVKAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECP 60
MEVKAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECP
Sbjct: 1 MEVKAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECP 60
Query: 61 LEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRL 120
LEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRL
Sbjct: 61 LEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRL 120
Query: 121 ALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITT 180
ALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITT
Sbjct: 121 ALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITT 180
Query: 181 QGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV 240
QGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV
Sbjct: 181 QGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV 240
Query: 241 SGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG 300
SGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG
Sbjct: 241 SGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG 300
Query: 301 AGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG 360
AGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG
Sbjct: 301 AGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG 360
Query: 361 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 420
GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG
Sbjct: 361 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 420
Query: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVY 480
APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVY
Sbjct: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVY 480
Query: 481 AADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK 540
AADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK
Sbjct: 481 AADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK 540
Query: 541 NLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPH 600
NLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPH
Sbjct: 541 NLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPH 600
Query: 601 SRSFTAPPVSGRYYADFLYPPELSARLSDLTLEGEQSSSSDTQTPGTLV 649
SRSFTAPPVSGRYYADFLYPPELSARLSDLTLEGEQSSSSDTQTPGTLV
Sbjct: 601 SRSFTAPPVSGRYYADFLYPPELSARLSDLTLEGEQSSSSDTQTPGTLV 649
>gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo
sapiens]
Length = 661
Score = 1311 bits (3393), Expect = 0.0
Identities = 645/645 (100%), Positives = 645/645 (100%)
Query: 5 AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG 64
AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG
Sbjct: 17 AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG 76
Query: 65 ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP 124
ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP
Sbjct: 77 ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP 136
Query: 125 DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC 184
DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC
Sbjct: 137 DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC 196
Query: 185 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 244
LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS
Sbjct: 197 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 256
Query: 245 PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ 304
PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ
Sbjct: 257 PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ 316
Query: 305 LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS 364
LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS
Sbjct: 317 LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS 376
Query: 365 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL 424
PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL
Sbjct: 377 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL 436
Query: 425 PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS 484
PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS
Sbjct: 437 PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS 496
Query: 485 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 544
NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL
Sbjct: 497 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 556
Query: 545 EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF 604
EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF
Sbjct: 557 EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF 616
Query: 605 TAPPVSGRYYADFLYPPELSARLSDLTLEGEQSSSSDTQTPGTLV 649
TAPPVSGRYYADFLYPPELSARLSDLTLEGEQSSSSDTQTPGTLV
Sbjct: 617 TAPPVSGRYYADFLYPPELSARLSDLTLEGEQSSSSDTQTPGTLV 661
>gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo
sapiens]
Length = 618
Score = 1249 bits (3231), Expect = 0.0
Identities = 613/613 (100%), Positives = 613/613 (100%)
Query: 1 MEVKAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECP 60
MEVKAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECP
Sbjct: 1 MEVKAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECP 60
Query: 61 LEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRL 120
LEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRL
Sbjct: 61 LEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRL 120
Query: 121 ALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITT 180
ALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITT
Sbjct: 121 ALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITT 180
Query: 181 QGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV 240
QGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV
Sbjct: 181 QGVCLGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV 240
Query: 241 SGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG 300
SGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG
Sbjct: 241 SGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG 300
Query: 301 AGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG 360
AGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG
Sbjct: 301 AGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG 360
Query: 361 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 420
GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG
Sbjct: 361 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 420
Query: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVY 480
APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVY
Sbjct: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVY 480
Query: 481 AADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK 540
AADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK
Sbjct: 481 AADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK 540
Query: 541 NLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPH 600
NLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPH
Sbjct: 541 NLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPH 600
Query: 601 SRSFTAPPVSGRY 613
SRSFTAPPVSGRY
Sbjct: 601 SRSFTAPPVSGRY 613
>gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo
sapiens]
Length = 630
Score = 1241 bits (3212), Expect = 0.0
Identities = 609/609 (100%), Positives = 609/609 (100%)
Query: 5 AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG 64
AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG
Sbjct: 17 AALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPG 76
Query: 65 ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP 124
ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP
Sbjct: 77 ERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAP 136
Query: 125 DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC 184
DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC
Sbjct: 137 DLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVC 196
Query: 185 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 244
LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS
Sbjct: 197 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 256
Query: 245 PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ 304
PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ
Sbjct: 257 PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQ 316
Query: 305 LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS 364
LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS
Sbjct: 317 LCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGS 376
Query: 365 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL 424
PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL
Sbjct: 377 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRL 436
Query: 425 PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS 484
PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS
Sbjct: 437 PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS 496
Query: 485 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 544
NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL
Sbjct: 497 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 556
Query: 545 EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF 604
EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF
Sbjct: 557 EGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSF 616
Query: 605 TAPPVSGRY 613
TAPPVSGRY
Sbjct: 617 TAPPVSGRY 625
>gi|150010540 FERM domain containing 4B [Homo sapiens]
Length = 1034
Score = 140 bits (352), Expect = 5e-33
Identities = 115/347 (33%), Positives = 180/347 (51%), Gaps = 41/347 (11%)
Query: 10 EAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPGERPQL 69
E + + K E++ L +++ LQE L K++EL+K+CL+EAELTG++P E PL GE+P
Sbjct: 417 EVSEEQKREKILELKKKEKLLQEKLLKKVEELKKICLREAELTGKMPKEYPLNIGEKPPQ 476
Query: 70 VRRRPPTARAYPPPHPNQAHHSLCPAEE-LALEALEREVSVQQQIAAAARRLALAPDLST 128
VRRR TA + +L P+EE AL+ LE +QQ++ AA++LA PDL
Sbjct: 477 VRRRVGTA--------FKLDDNLLPSEEDPALQELESNFLIQQKLVEAAKKLANEPDLCK 528
Query: 129 EQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVCLGMR 188
+++R+Q DA+++L E+E + + R R G LP
Sbjct: 529 TVKKKRKQDYTDAMKKLQEIENAINEYRIRCGKKPSQKATVLP----------------- 571
Query: 189 LAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERR 248
ED++ SESSSLS++ ++D+ F S P + L S G ER
Sbjct: 572 ------EDII-PSESSSLSDT-TTYDDPSDAFTFPGQRSSSVPHSPRILPPKSLGI-ERI 622
Query: 249 TPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGA-GPQLCK 307
K ++ + D + R +++ +SP ++L R GRS+P TPVLTR A +
Sbjct: 623 HFRKSSINEQFVDTRQSREMLSTHSSPYKTLERRPQG--GRSMPTTPVLTRNAYSSSHLE 680
Query: 308 PE--GLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL 352
PE H RQ SGS +SQ ++ SD+ +++++RS+S+E L
Sbjct: 681 PESSSQHCRQRSGSLESQSHL-LSEMDSDKPFFSLSKSQRSSSTEIL 726
>gi|116063562 FERM domain containing 4A [Homo sapiens]
Length = 1039
Score = 125 bits (313), Expect = 2e-28
Identities = 112/383 (29%), Positives = 167/383 (43%), Gaps = 56/383 (14%)
Query: 10 EAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPGERPQL 69
+++ K + L L RQ L+E L +L+EL+K+CL+EAELTG+LP E PL+PGE P +
Sbjct: 378 DSSQSAKKDMLAALKSRQEALEETLRQRLEELKKLCLREAELTGKLPVEYPLDPGEEPPI 437
Query: 70 VRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAPDLSTE 129
VRRR TA L EE LE LERE ++Q QI AARRLA P++S +
Sbjct: 438 VRRRIGTA------FKLDEQKILPKGEEAELERLEREFAIQSQITEAARRLASDPNVSKK 491
Query: 130 QRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVIT-----TQGVC 184
+++R+ +AL++L E+E + + R + G L + G++ + + +
Sbjct: 492 LKKQRKTSYLNALKKLQEIENAINENRIKSGKKPTQRAS-LIIDDGNIASEDSSLSDALV 550
Query: 185 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCF-----------SLAERPSPPKA 233
L +Q++ LHS L SH+ P + P PK
Sbjct: 551 LEDEDSQVTSTISPLHSPHKGLPPRPPSHNRPPPPQSLEGLRQMHYHRNDYDKSPIKPKM 610
Query: 234 WDQ------------LRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPR 281
W + + S S +R P ++ G S +N SP R LP
Sbjct: 611 WSESSLDEPYEKVKKRSSHSHSSSHKRFPSTGSCAEAGGGSNSLQN------SPIRGLPH 664
Query: 282 SASSFEGRSVPATPVL----------TRGA--GPQLCKPEGLHSRQWSGSQDSQMGFPRA 329
S S+P+TP L TR P LH R S S +SQ +
Sbjct: 665 WNSQ---SSMPSTPDLRVRSPHYVHSTRSVDISPTRLHSLALHFRHRSSSLESQGKLLGS 721
Query: 330 DPASDRASLFVARTRRSNSSEAL 352
+ + + RTR SN S+ +
Sbjct: 722 ENDTGSPDFYTPRTRSSNGSDPM 744
>gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens]
Length = 578
Score = 95.9 bits (237), Expect = 1e-19
Identities = 84/269 (31%), Positives = 125/269 (46%), Gaps = 41/269 (15%)
Query: 26 RQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHP 85
+QR L+ L L+ELR++CL+EAELTG LP E PL+PGE+ VRRR A
Sbjct: 37 QQRALEARLEACLEELRRLCLREAELTGTLPAEYPLKPGEKAPKVRRRIGAAYKL----D 92
Query: 86 NQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRL 145
+ A H E L +LER++++Q QI AARRL L +LS + RR+R+ ++L
Sbjct: 93 DWALH-----REDPLSSLERQLALQLQITEAARRLCLEENLSRQARRQRKHSMLQEEKKL 147
Query: 146 HELEEQLRDVRARLGLP---VLPLPQPLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSE 202
EL+ L + R P LPL + L S S ++ + ++L E
Sbjct: 148 QELQRCLVERRRNSEPPPAAALPLGRELSASDDSSLS---------------DGLLLEEE 192
Query: 203 SSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV--SGGSPER----RTPWKPPPS 256
S + + P + RP PP+ + L+ GSPER +PWK
Sbjct: 193 ESQVP--------KPPPESPAPPSRPLPPQTLEGLQPTGPEAGSPERAPVQNSPWKETSL 244
Query: 257 DLYGDLKSRRNSVASPTSPTRSLPRSASS 285
D + + + S +S + P+ S
Sbjct: 245 DHPYEKPRKSSEPWSESSSPATTPQDGPS 273
>gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens]
Length = 663
Score = 95.9 bits (237), Expect = 1e-19
Identities = 84/269 (31%), Positives = 125/269 (46%), Gaps = 41/269 (15%)
Query: 26 RQRTLQEALSLKLQELRKVCLQEAELTGQLPPECPLEPGERPQLVRRRPPTARAYPPPHP 85
+QR L+ L L+ELR++CL+EAELTG LP E PL+PGE+ VRRR A
Sbjct: 122 QQRALEARLEACLEELRRLCLREAELTGTLPAEYPLKPGEKAPKVRRRIGAAYKL----D 177
Query: 86 NQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAPDLSTEQRRRRRQVQADALRRL 145
+ A H E L +LER++++Q QI AARRL L +LS + RR+R+ ++L
Sbjct: 178 DWALH-----REDPLSSLERQLALQLQITEAARRLCLEENLSRQARRQRKHSMLQEEKKL 232
Query: 146 HELEEQLRDVRARLGLP---VLPLPQPLPLSTGSVITTQGVCLGMRLAQLSQEDVVLHSE 202
EL+ L + R P LPL + L S S ++ + ++L E
Sbjct: 233 QELQRCLVERRRNSEPPPAAALPLGRELSASDDSSLS---------------DGLLLEEE 277
Query: 203 SSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAV--SGGSPER----RTPWKPPPS 256
S + + P + RP PP+ + L+ GSPER +PWK
Sbjct: 278 ESQVP--------KPPPESPAPPSRPLPPQTLEGLQPTGPEAGSPERAPVQNSPWKETSL 329
Query: 257 DLYGDLKSRRNSVASPTSPTRSLPRSASS 285
D + + + S +S + P+ S
Sbjct: 330 DHPYEKPRKSSEPWSESSSPATTPQDGPS 358
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 74.7 bits (182), Expect = 2e-13
Identities = 111/409 (27%), Positives = 145/409 (35%), Gaps = 64/409 (15%)
Query: 208 ESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPP---PSDLYGDLKS 264
+SGAS LA+ PSP VS +R P K P G+L
Sbjct: 774 DSGASATASSKGTLTYLADSPSP-------LGVSVSPQTKRPPTKKGSAGPDTPIGNL-- 824
Query: 265 RRNSVASPTSPTRS--LPRSASSFEG-RSVPAT-----PVLTRGAGPQLC----KPEG-- 310
+SP SP + LP ++ SF+G + PAT P +GA P+G
Sbjct: 825 -----SSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVT 879
Query: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG--------GA 362
L ++ + FP+ PA+ A + S+S + A G GA
Sbjct: 880 LPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGA 939
Query: 363 GSPPAPLAPSASGPPVCKSSEVLYERPQPTP------AFSSRTAGPPDPPRAARPS---- 412
+PPA PS G P S + P TP + G P PP A PS
Sbjct: 940 PTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGG 999
Query: 413 SAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTM 472
A P+ +GAP P V +G P + PPAA P P + T
Sbjct: 1000 PATPSPKGAPTPPAVTP------PSPKGSPAATPFPKGASTPPAATPPSP--KGSPAATP 1051
Query: 473 LP-GPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIP 531
LP G P AA SP P + T P PP GP P+P PP P
Sbjct: 1052 LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPAT-PSPKGAPMPPAATP 1110
Query: 532 SAGE----RSGHKNLALEGLRDWYIRNSGLAAGPQR-RPVLPSVGPPHP 575
+ + HK GLA P + P P+ PP P
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1159
Score = 54.7 bits (130), Expect = 3e-07
Identities = 87/346 (25%), Positives = 117/346 (33%), Gaps = 60/346 (17%)
Query: 243 GSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAG 302
GSP K P+ L S + A+P+ P +A+ + PATP
Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM 1104
Query: 303 PQLCKPE----GLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAA 358
P P GL + G+ + P A P S + L + + ++ A
Sbjct: 1105 PPAATPPSPKGGLATPPHKGAPTT----PAATPPSPKGGLATPPPKGAPTTPAATPPSPK 1160
Query: 359 GGGAGSPP--APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAP 416
GG A PP AP P+A+ PP K P P A ++ A PP P + A P
Sbjct: 1161 GGLATPPPKGAPTTPAAT-PPSPKGG---LATPSPKGAPTTPAATPPSP----KGGLATP 1212
Query: 417 ASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLP-G 475
+ +GAP PAA P P + GL T P G
Sbjct: 1213 SPKGAP------------------------------TTPAATPPSP---KGGLATPSPKG 1239
Query: 476 PPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEG-----PEVHPNPLLWMPP-PTR 529
P AA SP P + T P PP G + PNP + PP P
Sbjct: 1240 APTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKG 1299
Query: 530 IPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHP 575
P+ G + S P+ P P+V PP P
Sbjct: 1300 GPATSPPKGAP--TPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSP 1343
Score = 43.9 bits (102), Expect = 5e-04
Identities = 81/352 (23%), Positives = 121/352 (34%), Gaps = 62/352 (17%)
Query: 229 SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSP--TRSLPRSASSF 286
SPPK A + SP + +P PPP + +P SP T +LP + S
Sbjct: 1304 SPPKGAPTPPAATPPSP-KGSPGTPPPKG------APTPPAVTPPSPKGTPTLPATTPSS 1356
Query: 287 EGRSVPATPVLTRGAGPQLCKPE---GLHSRQWSGSQDSQMGFPRADPASDRASLFVART 343
+G P TP G P P G S + + P+ DP S + +
Sbjct: 1357 KGG--PTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAV---IPLS 1411
Query: 344 RRSNSSEALLVDRAAGGGAG--SPPA------------------PLAPSASGPPVCKSSE 383
+ + + + AA G +PPA P PS+ G P +
Sbjct: 1412 PKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVT 1471
Query: 384 VLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSL---DRG 440
+ P P + ++ P P A PA GAP LP V + R
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAP-------ATPAPMGAPTLPAVIPSSPKEVPATPSSRR 1524
Query: 441 LPRSGGGTGWGE------------LPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPL 488
P + T + +PPA VP P + + T P + +++SP
Sbjct: 1525 DPIAPTATLLSKKTPATLAPKEALIPPAMTVPSP-KKTPAIPTPKEAPATPSSKEASSPP 1583
Query: 489 LRTKDPHTRATRTKPCGLPPE-AAEGPEVHPNPLLWMPP-PTRIPSAGERSG 538
T + A K +PP + P+ P P PP P + P+ G
Sbjct: 1584 AVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKG 1635
Score = 43.9 bits (102), Expect = 5e-04
Identities = 77/326 (23%), Positives = 117/326 (35%), Gaps = 49/326 (15%)
Query: 225 AERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSAS 284
A P PK + V+ S ++ P P P + + P+SP + +P + S
Sbjct: 1469 AVTPPSPKEPPAPKQVATSSSPKKAPATPAP------MGAPTLPAVIPSSP-KEVPATPS 1521
Query: 285 SFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTR 344
S P +L++ L E L + + P+ PA A
Sbjct: 1522 SRRDPIAPTATLLSKKTPATLAPKEALIPPAMT------VPSPKKTPAIPTPKEAPATPS 1575
Query: 345 RSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPD 404
+S V + GA SP L P A P K + PTP PP
Sbjct: 1576 SKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEA--------PTPP----AVTPPS 1623
Query: 405 PPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAE----VP 460
P + A PA +G P PPV L D P S +P A++
Sbjct: 1624 PEKGP----ATPAPKGTPTSPPVTPSSLKDSPTS---PASVTCKMGATVPQASKGLPAKK 1676
Query: 461 GPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHT-RATRTKPCGLPPEAA----EGP- 514
GP + ++ L+ P P+ A + K P T +++ T P P +A +GP
Sbjct: 1677 GPTALKEVLVAPAPESTPIITAPTR------KGPQTKKSSATSPPICPDPSAKNGSKGPL 1730
Query: 515 -EVHPNPLLWMPPPTRIPSAGERSGH 539
V P PLL + + + G+ + H
Sbjct: 1731 STVAPAPLLPVQKDSSKTAKGKDASH 1756
Score = 42.0 bits (97), Expect = 0.002
Identities = 79/347 (22%), Positives = 106/347 (30%), Gaps = 65/347 (18%)
Query: 249 TPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKP 308
TP PPS G + + +PT+P + P S P P
Sbjct: 1174 TPAATPPSPKGG--LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS--PK 1229
Query: 309 EGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGG-------G 361
GL + G+ + P A P S + + + + A GG G
Sbjct: 1230 GGLATPSPKGAPTT----PAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKG 1285
Query: 362 AGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPAS-RG 420
A +P PS G P + P TP + G P P A P + P S +G
Sbjct: 1286 APNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG 1345
Query: 421 APRLPPVCGDFLLDYSLDRGLPRSGGG-----TGWGELPPAA-------EVPGPLSRRDG 468
P LP P S GG + G PPAA P S + G
Sbjct: 1346 TPTLPAT-------------TPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRG 1392
Query: 469 LLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT 528
+P P + + PL K P T TR + P + P L P T
Sbjct: 1393 --PAIPSPKGDPTSPAVIPLSPKKAPATPVTR-EGAATPSKGDLTPPAVTPVSLKKAPAT 1449
Query: 529 RIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHP 575
P G + + P LP+V PP P
Sbjct: 1450 SAPKGGPAT---------------------PSSKGDPTLPAVTPPSP 1475
Score = 33.9 bits (76), Expect = 0.48
Identities = 63/252 (25%), Positives = 89/252 (35%), Gaps = 31/252 (12%)
Query: 349 SEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRA 408
S AL V A G + P P +P+ P C S P P+P+ + T P + P
Sbjct: 29 SSALSVTAALGQPGPTLPPPCSPA---PQQCPLSAANQASPFPSPSTIAST--PLEVPFP 83
Query: 409 ARPSSAAPASRGAPR----LPPVCGDFLLDYSLDRGLPRSGG---GTGWGELPPAAEVPG 461
S A AP LP + G + +L P GT P A
Sbjct: 84 QSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALA 143
Query: 462 PLSRRDGLL---TMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHP 518
P S + +L PP V A+S S + + +T +P E P+ P
Sbjct: 144 PHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTP 203
Query: 519 NP---LLWMPPPTRIPSAGERSGHKNL-----------ALEGLRDWYIRNSGLAAGPQRR 564
+P + +P P A +SG +L A ++D I S + PQ
Sbjct: 204 SPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTI--SSVLISPQNP 261
Query: 565 PVLPSVGPPHPP 576
L GP PP
Sbjct: 262 GSLSLKGPVSPP 273
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 65.5 bits (158), Expect = 1e-10
Identities = 100/365 (27%), Positives = 136/365 (37%), Gaps = 46/365 (12%)
Query: 199 LHSESSSLSESGASHDNEEPHGCFSLAERP-SPPKAWDQLRAVS----GGSPERRTPWKP 253
L S ++ ++SG S P G S + +P SPP + S G PE + P
Sbjct: 111 LRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMP 170
Query: 254 PPSDLYGDLKSRRNSVASPTSPTRSLPRSA-SSFEGRSVPATPVLTRGAGPQLCKPE--G 310
PP D+ S+ +S+ P T PR SS R P P R P P G
Sbjct: 171 PPRP---DVGSKPDSIPPPVPST---PRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPG 224
Query: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL----LVDRAAGGGAGSPP 366
G Q + P S+R L +R + + +R + PP
Sbjct: 225 NRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPP 284
Query: 367 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG---APR 423
P P + PPV + P P+ SS+ PP PP P P+S G PR
Sbjct: 285 PP--PQNNKPPVPST---------PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPR 333
Query: 424 LPPVCGDFLLDYSLDRGLP--RSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYA 481
LP + SL P S G +G PP+ P P+ G LP PPPV
Sbjct: 334 LPQ------RNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSR 387
Query: 482 ADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPN-PLLWMPPPTRIPSAGERSGHK 540
S S L P T ++ P + P + P+ P PPP PS R+G +
Sbjct: 388 NGSTSRAL----PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP-PSTSIRNGFQ 442
Query: 541 NLALE 545
+ E
Sbjct: 443 DSPCE 447
Score = 34.7 bits (78), Expect = 0.28
Identities = 54/198 (27%), Positives = 71/198 (35%), Gaps = 24/198 (12%)
Query: 245 PERRTPWKPPPSDLYGD----LKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG 300
P R P PPS D L R S++S T P S GRS P P +
Sbjct: 313 PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPS--------PGRSGPLPPPPSER 364
Query: 301 AGPQLCKPEGLHSRQWSGSQDSQMGFP-RADPASDRA-SLFVARTRRSNSSEALLVDRAA 358
P + P G S+ G RA PA+ + S + RS L DR +
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424
Query: 359 GGGAGSPPAPLAPSASG--PPVCKSS-------EVLYERPQPTPAFSSRTAGPPDPPRAA 409
G A PP P +G C+ + + P P P + + P R
Sbjct: 425 AG-APPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLARNE 483
Query: 410 RPSSAAPASRGAPRLPPV 427
S + RGAP LPP+
Sbjct: 484 SRSGSNRRERGAPPLPPI 501
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 65.5 bits (158), Expect = 1e-10
Identities = 100/365 (27%), Positives = 136/365 (37%), Gaps = 46/365 (12%)
Query: 199 LHSESSSLSESGASHDNEEPHGCFSLAERP-SPPKAWDQLRAVS----GGSPERRTPWKP 253
L S ++ ++SG S P G S + +P SPP + S G PE + P
Sbjct: 111 LRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMP 170
Query: 254 PPSDLYGDLKSRRNSVASPTSPTRSLPRSA-SSFEGRSVPATPVLTRGAGPQLCKPE--G 310
PP D+ S+ +S+ P T PR SS R P P R P P G
Sbjct: 171 PPRP---DVGSKPDSIPPPVPST---PRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPG 224
Query: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEAL----LVDRAAGGGAGSPP 366
G Q + P S+R L +R + + +R + PP
Sbjct: 225 NRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPP 284
Query: 367 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG---APR 423
P P + PPV + P P+ SS+ PP PP P P+S G PR
Sbjct: 285 PP--PQNNKPPVPST---------PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPR 333
Query: 424 LPPVCGDFLLDYSLDRGLP--RSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYA 481
LP + SL P S G +G PP+ P P+ G LP PPPV
Sbjct: 334 LPQ------RNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSR 387
Query: 482 ADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPN-PLLWMPPPTRIPSAGERSGHK 540
S S L P T ++ P + P + P+ P PPP PS R+G +
Sbjct: 388 NGSTSRAL----PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP-PSTSIRNGFQ 442
Query: 541 NLALE 545
+ E
Sbjct: 443 DSPCE 447
Score = 34.7 bits (78), Expect = 0.28
Identities = 54/198 (27%), Positives = 71/198 (35%), Gaps = 24/198 (12%)
Query: 245 PERRTPWKPPPSDLYGD----LKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRG 300
P R P PPS D L R S++S T P S GRS P P +
Sbjct: 313 PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPS--------PGRSGPLPPPPSER 364
Query: 301 AGPQLCKPEGLHSRQWSGSQDSQMGFP-RADPASDRA-SLFVARTRRSNSSEALLVDRAA 358
P + P G S+ G RA PA+ + S + RS L DR +
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424
Query: 359 GGGAGSPPAPLAPSASG--PPVCKSS-------EVLYERPQPTPAFSSRTAGPPDPPRAA 409
G A PP P +G C+ + + P P P + + P R
Sbjct: 425 AG-APPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLARNE 483
Query: 410 RPSSAAPASRGAPRLPPV 427
S + RGAP LPP+
Sbjct: 484 SRSGSNRRERGAPPLPPI 501
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 60.8 bits (146), Expect = 4e-09
Identities = 177/695 (25%), Positives = 242/695 (34%), Gaps = 165/695 (23%)
Query: 56 PPECPLEPGERPQLVR----RRPPTARAYPP---PHPNQAHHSLCPAEELALEALEREVS 108
PP P P + P + + PP+ + PP PH + P LAL +L+ S
Sbjct: 360 PPATP--PSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTS 417
Query: 109 VQQQIAAAARR-LALAPDLSTEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLP-- 165
+ A L ++P R+ Q + R ++A L LP P
Sbjct: 418 LGSPTLQATHSFLTMSP--------RQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPL 469
Query: 166 ----LPQPLPLSTGSVITTQGVCLGMRLAQLSQEDVV-------LHSESS----SLSESG 210
P PLS S +T + LA S + + L ++SS SL
Sbjct: 470 QTSLSPAVSPLS--SPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPP 527
Query: 211 ASHDNEEPHGCFSLAERP----SPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRR 266
AS SLA P S P L +P P + PPS L
Sbjct: 528 ASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAP---CPLQAPPSPLTTPPPETP 584
Query: 267 NSVASPTSPTRSLPRSASS-FEGR-SVPATPVLTRG--AGPQLCKPEGLHSRQWSGSQDS 322
+S+A+P P ++ P AS +G S P +P+ T A P L P
Sbjct: 585 SSIATP--PPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPP------------- 629
Query: 323 QMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPP--APLAPSASGPPVCK 380
+ P + PAS S + ++ ++ A+ + +A SPP AP +P AS PPV
Sbjct: 630 -LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS-PPVSP 687
Query: 381 SS---------------EVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGA---- 421
S+ +V P P S T P PP A P P S A
Sbjct: 688 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPM 747
Query: 422 -------PRLPPVCG--DFLLDYSLDRGLPRSGGGTGWGELPPAAEVP------------ 460
PR+PP+ + S LP S + PPA P
Sbjct: 748 SPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASF 807
Query: 461 ---GPLSRRDGL-LTMLPGPPPVYAADSNSPLLRT-----KDPHTRATRTKPCGLPPEAA 511
P S L ++ L PPP +PLL+ P +A R P P +
Sbjct: 808 PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV 867
Query: 512 EGPE----VHPNPLLWMPPPTRIPSA----GERSGHKNLAL---EGLRDWYI-RNSGLAA 559
GP + P P PPP+R PS+ + +GH + A E LR + G AA
Sbjct: 868 SGPRLTLALAPGP---PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 924
Query: 560 GPQRRPVLPSVGP------PHPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAPPVSGRY 613
P L + P P PP A GAP APLP PP +G
Sbjct: 925 SPPPDAELAACHPAAWSRGPAPPL----------AFRGAPG-APLPW------PPATGPG 967
Query: 614 YADFLYPPELSARLSDLTLEGEQSSSSDTQTPGTL 648
AD L T+ + S T PG L
Sbjct: 968 SADGL-----------CTIYETEGPESATPAPGAL 991
Score = 49.7 bits (117), Expect = 8e-06
Identities = 101/419 (24%), Positives = 143/419 (34%), Gaps = 75/419 (17%)
Query: 227 RPSPPKAWDQLRAVSGGSPERRTPWKPP----PSDLYGDLKSRRNSVASPTSPTRSLPRS 282
RP PP + ++VS S T P PS G + S++S +P S RS
Sbjct: 197 RPRPPTEGPR-KSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255
Query: 283 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVAR 342
S R P P A P KP+GL + + Q+ PR D A L +
Sbjct: 256 GPS--ARGTPRAP-----AHPSQPKPKGLQALR-----PPQVTPPRKDAAPALGPLSSSP 303
Query: 343 TRRSNSSEALLVDRAAGGGAGSP-PAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAG 401
+ S A +P PA L PS PP+ + P P+ + +
Sbjct: 304 LATPSPSGTKARPVPPPDNAATPLPATLPPS---PPLATPLPLAPPSPSAPPSLQTLPSP 360
Query: 402 PPDPPRAARPSSAAPASRGAPRL---PPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAE 458
P PP A PS P + P L PP+ + +SL P
Sbjct: 361 PATPPSQAPPSMTTPPMQAPPSLQTIPPI----QVPHSLTS--------------PSLQA 402
Query: 459 VPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHP 518
P PL+ T G P + A S + + + + ++P PP++ P P
Sbjct: 403 PPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSP--PLQAP 460
Query: 519 NPLLWMPP------PTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGP 572
L PP P P + + H AL S LA+ + P+ + P
Sbjct: 461 LSLPASPPLQTSLSPAVSPLSSPLTIHPLQAL----------SSLASHSPQAPLSSLIMP 510
Query: 573 PHPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAPPVSGRYYADFLYPPELSARLSDLT 631
P E +L Q P S T PP+ L PP L + LT
Sbjct: 511 P---------LETQSSLAPPSLQTP---PASLTTPPLEN---LPSLAPPPLQTASAPLT 554
Score = 40.8 bits (94), Expect = 0.004
Identities = 105/456 (23%), Positives = 142/456 (31%), Gaps = 87/456 (19%)
Query: 227 RPSPPKAWDQLRAVSGGSPERRTPWK-----------PPPSDLYGDLKSRRNSVASPTSP 275
RP PP LR + R P P + G +S S +P S
Sbjct: 34 RPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASR 93
Query: 276 TRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDR 335
+ R + ++ PV + G +P L + S + + +A A R
Sbjct: 94 PPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKR 153
Query: 336 ASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAF 395
++L A RR S G P +P+ + +EV RP P+
Sbjct: 154 SALS-AGARRDTS--------------GPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP 198
Query: 396 SSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDF-------LLDYSLDRGLPRSGGGT 448
T GP +A S S A R P G L + P G +
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPS 258
Query: 449 GWGELPPAAEVPGPLSRRDGLLTMLP---GPPPVYAADSNSPL----LRTKDPHTRATRT 501
G P A + GL + P PP AA + PL L T P R
Sbjct: 259 ARG--TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARP 316
Query: 502 KPCGLPPEAAEGP---EVHPNPLLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLA 558
P PP+ A P + P+P L P P PS
Sbjct: 317 VP---PPDNAATPLPATLPPSPPLATPLPLAPPS-------------------------P 348
Query: 559 AGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLP--------HSRSFTAPP-- 608
+ P LPS PP P A + PS +P S S APP
Sbjct: 349 SAPPSLQTLPS--PPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSP 406
Query: 609 --VSGRYYADFLYPPELSARLSDLTLEGEQSSSSDT 642
+S L P L A S LT+ Q+ +S T
Sbjct: 407 LALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLT 442
Score = 38.1 bits (87), Expect = 0.026
Identities = 52/213 (24%), Positives = 65/213 (30%), Gaps = 32/213 (15%)
Query: 406 PRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRG------LPRSGGGTGWGELPPAAEV 459
P A P P G+PR PP L G L GG G +P +A
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 460 PGPLSRRDGLLTMLPGP-PPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHP 518
GP +R G + P PP +P + P GP P
Sbjct: 77 AGP-TRSAGTSSRNPASRPPASGRGERAPPAKNTSP------------------GPVSSP 117
Query: 519 NPLLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFL 578
P + G R + G + S L+AG +R P+ G P P
Sbjct: 118 GRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM- 176
Query: 579 HARCYEVGQALYGAPSQAPLPHSRSFTAPPVSG 611
AR G P AP R PP G
Sbjct: 177 -ARRSRAAGTEVGLPRPAPSARPR----PPTEG 204
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 60.8 bits (146), Expect = 4e-09
Identities = 80/317 (25%), Positives = 106/317 (33%), Gaps = 53/317 (16%)
Query: 228 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 282
P PP Q GG+ P P PPP GD KSR +S + P P P+
Sbjct: 132 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ---GDNKSR-SSRSPPGKPQGPPPQG 187
Query: 283 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVAR 342
+ +G P PQ P+G + Q G P P D
Sbjct: 188 GNQPQGPPPPP-------GKPQGPPPQGGNKPQGPPPPGKPQGPP---PQGD-------- 229
Query: 343 TRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQ-PTPAFSSRTAG 401
N S++ R+ G PP GPP +PQ P P ++ G
Sbjct: 230 ----NKSQSA---RSPPGKPQGPPPQGGNQPQGPPPPPG------KPQGPPPQGGNKPQG 276
Query: 402 PPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPG 461
PP P + P + + R PP +G P GG G PP + G
Sbjct: 277 PPPPGKPQGPPPQGGSKSRSSRSPP---------GKPQGPPPQGGNQPQGPPPPPGKPQG 327
Query: 462 PLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPL 521
P + GPPP P +K R+ KP G P + P+ P P
Sbjct: 328 PPPQGGN---KPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPA 384
Query: 522 LWMPPPTRIPSAGERSG 538
P + P AG+ G
Sbjct: 385 GGNPQQPQAPPAGQPQG 401
Score = 49.3 bits (116), Expect = 1e-05
Identities = 71/280 (25%), Positives = 90/280 (32%), Gaps = 40/280 (14%)
Query: 361 GAGSPPAPLAPSAS--GPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPAS 418
G P P +P GPP ++ PQ P + GPP P +P P
Sbjct: 43 GGNKPQGPPSPPGKPQGPPPQGGNQ-----PQGPPPPPGKPQGPP-PQGGNKPQGPPPP- 95
Query: 419 RGAPRLPPVCGDFLLD----YSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLP 474
G P+ PP GD +G P GG G PP + GP +
Sbjct: 96 -GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG---NKPQ 151
Query: 475 GPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAG 534
GPPP P K +R+ KP G PP+ P+ P PPP +
Sbjct: 152 GPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPP------PPPGKPQGPP 205
Query: 535 ERSGHKNLA------LEGLRDWYIRNSGLAAGPQRRPVLP-------SVGPPHPPFLHAR 581
+ G+K +G S A P +P P GPP PP
Sbjct: 206 PQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 265
Query: 582 CYEVGQALYGAPSQAPLPHSRSFTAPPVSGRYYADFLYPP 621
G G Q P P + PP G PP
Sbjct: 266 PPPQG----GNKPQGPPPPGKPQGPPPQGGSKSRSSRSPP 301
Score = 39.3 bits (90), Expect = 0.011
Identities = 53/191 (27%), Positives = 71/191 (37%), Gaps = 40/191 (20%)
Query: 228 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 282
P PP Q GG+ P P PPP G KSR +S + P P P+
Sbjct: 256 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ---GGSKSR-SSRSPPGKPQGPPPQG 311
Query: 283 ASSFEGRSVPATPVLTRGAGPQLC-KPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVA 341
+ +G P P +G PQ KP+G G P+ P + +
Sbjct: 312 GNQPQGP--PPPPGKPQGPPPQGGNKPQG----------PPPPGKPQGPPPQGGSK---S 356
Query: 342 RTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAG 401
R+ RS + + G PP P A G P ++PQ PA + G
Sbjct: 357 RSARSPPGKPQGPPQQEGNNPQGPPPP----AGGNP---------QQPQAPPA--GQPQG 401
Query: 402 PPDPPRAARPS 412
PP PP+ RPS
Sbjct: 402 PPRPPQGGRPS 412
Score = 38.5 bits (88), Expect = 0.020
Identities = 63/249 (25%), Positives = 86/249 (34%), Gaps = 54/249 (21%)
Query: 228 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 282
P PP Q GG+ P P PPP GD KS+ S SP + P
Sbjct: 194 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ---GDNKSQ--SARSPPGKPQGPPP- 247
Query: 283 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVAR 342
+G + P P G PQ P+G + Q G P + R+S
Sbjct: 248 ----QGGNQPQGPPPPPGK-PQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSS----- 297
Query: 343 TRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQ-PTPAFSSRTAG 401
R+ G PP GPP +PQ P P ++ G
Sbjct: 298 -------------RSPPGKPQGPPPQGGNQPQGPPPPPG------KPQGPPPQGGNKPQG 338
Query: 402 PPDP-------PRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPR-SGGGTGWGEL 453
PP P P+ S +A + G P+ PP + + +G P +GG +
Sbjct: 339 PPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQ-----QEGNNPQGPPPPAGGNPQQPQA 393
Query: 454 PPAAEVPGP 462
PPA + GP
Sbjct: 394 PPAGQPQGP 402
Score = 37.4 bits (85), Expect = 0.044
Identities = 40/162 (24%), Positives = 54/162 (33%), Gaps = 40/162 (24%)
Query: 380 KSSEVLYERPQPTPAFS-SRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLD 438
+S ++ PQ P ++ GPP PP +P P P+ PP
Sbjct: 27 ESPSLIAGNPQGAPPQGGNKPQGPPSPP--GKPQGPPPQGGNQPQGPPP------PPGKP 78
Query: 439 RGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRA 498
+G P GG G PP P PP S SP R+
Sbjct: 79 QGPPPQGGNKPQGPPPPGK----------------PQGPPPQGDKSRSP---------RS 113
Query: 499 TRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK 540
KP G PP+ P+ P PPP + + G+K
Sbjct: 114 PPGKPQGPPPQGGNQPQGPP------PPPGKPQGPPPQGGNK 149
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 57.8 bits (138), Expect = 3e-08
Identities = 95/390 (24%), Positives = 137/390 (35%), Gaps = 66/390 (16%)
Query: 256 SDLYGDLKSRRNSVASPTSPTRSLPRSASSF----EGRSVPAT-PVLTRGAGPQLCKPEG 310
+D K++ ++ P SP+ S+ S EG S P R P + P+
Sbjct: 107 ADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQD 166
Query: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFV--ARTRRSNSSEALLVDRAAGGGAGSPP-- 366
S S +Q + +A P + +A V A + + L PP
Sbjct: 167 NESDSDSSAQQQML---QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQG 223
Query: 367 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPP 426
+P A A P ++ V + Q PA + P PP P P L P
Sbjct: 224 SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---------PPLQP 274
Query: 427 VCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPP-----PVYA 481
+ G + P G+ PP GP S + G L PGPP P A
Sbjct: 275 LTGS-----AGQPSAPSHAQPPLHGQGPP-----GPHSLQAGPLLQHPGPPQPFGLPPQA 324
Query: 482 ADSNSPLLRTKD---PHT--------------RATRTKPCGLPPEAAEGPEVHPNPLLWM 524
+ +PL + PHT + R +P LPP P + P
Sbjct: 325 SQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP--LPPAPLAMPHIKP------ 376
Query: 525 PPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYE 584
PP T IP HK+ + N+ L P +P L S+ HPP H +
Sbjct: 377 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKP-LSSLSTHHPPSAHPPPLQ 435
Query: 585 V---GQALYGAPSQAP-LPHSRSFTAPPVS 610
+ Q L +P+Q P L S++ PP S
Sbjct: 436 LMPQSQPLPSSPAQPPGLTQSQNLPPPPAS 465
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.8 bits (138), Expect = 3e-08
Identities = 95/390 (24%), Positives = 137/390 (35%), Gaps = 66/390 (16%)
Query: 256 SDLYGDLKSRRNSVASPTSPTRSLPRSASSF----EGRSVPAT-PVLTRGAGPQLCKPEG 310
+D K++ ++ P SP+ S+ S EG S P R P + P+
Sbjct: 661 ADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQD 720
Query: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFV--ARTRRSNSSEALLVDRAAGGGAGSPP-- 366
S S +Q + +A P + +A V A + + L PP
Sbjct: 721 NESDSDSSAQQQML---QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQG 777
Query: 367 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPP 426
+P A A P ++ V + Q PA + P PP P P L P
Sbjct: 778 SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---------PPLQP 828
Query: 427 VCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPP-----PVYA 481
+ G + P G+ PP GP S + G L PGPP P A
Sbjct: 829 LTGS-----AGQPSAPSHAQPPLHGQGPP-----GPHSLQAGPLLQHPGPPQPFGLPPQA 878
Query: 482 ADSNSPLLRTKD---PHT--------------RATRTKPCGLPPEAAEGPEVHPNPLLWM 524
+ +PL + PHT + R +P LPP P + P
Sbjct: 879 SQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP--LPPAPLAMPHIKP------ 930
Query: 525 PPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYE 584
PP T IP HK+ + N+ L P +P L S+ HPP H +
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKP-LSSLSTHHPPSAHPPPLQ 989
Query: 585 V---GQALYGAPSQAP-LPHSRSFTAPPVS 610
+ Q L +P+Q P L S++ PP S
Sbjct: 990 LMPQSQPLPSSPAQPPGLTQSQNLPPPPAS 1019
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.8 bits (138), Expect = 3e-08
Identities = 95/390 (24%), Positives = 137/390 (35%), Gaps = 66/390 (16%)
Query: 256 SDLYGDLKSRRNSVASPTSPTRSLPRSASSF----EGRSVPAT-PVLTRGAGPQLCKPEG 310
+D K++ ++ P SP+ S+ S EG S P R P + P+
Sbjct: 661 ADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQD 720
Query: 311 LHSRQWSGSQDSQMGFPRADPASDRASLFV--ARTRRSNSSEALLVDRAAGGGAGSPP-- 366
S S +Q + +A P + +A V A + + L PP
Sbjct: 721 NESDSDSSAQQQML---QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQG 777
Query: 367 APLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPP 426
+P A A P ++ V + Q PA + P PP P P L P
Sbjct: 778 SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---------PPLQP 828
Query: 427 VCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPP-----PVYA 481
+ G + P G+ PP GP S + G L PGPP P A
Sbjct: 829 LTGS-----AGQPSAPSHAQPPLHGQGPP-----GPHSLQAGPLLQHPGPPQPFGLPPQA 878
Query: 482 ADSNSPLLRTKD---PHT--------------RATRTKPCGLPPEAAEGPEVHPNPLLWM 524
+ +PL + PHT + R +P LPP P + P
Sbjct: 879 SQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP--LPPAPLAMPHIKP------ 930
Query: 525 PPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYE 584
PP T IP HK+ + N+ L P +P L S+ HPP H +
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKP-LSSLSTHHPPSAHPPPLQ 989
Query: 585 V---GQALYGAPSQAP-LPHSRSFTAPPVS 610
+ Q L +P+Q P L S++ PP S
Sbjct: 990 LMPQSQPLPSSPAQPPGLTQSQNLPPPPAS 1019
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 56.2 bits (134), Expect = 9e-08
Identities = 90/373 (24%), Positives = 125/373 (33%), Gaps = 60/373 (16%)
Query: 226 ERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVA-------SPTSPTRS 278
+RP PP L V G +PPP G + A +P P +
Sbjct: 103 QRPGPPSPRRPL--VPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK- 159
Query: 279 LPRSASSFEGRSVPAT-PVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRAS 337
P ++ R+ P P G GP KP G + Q + + A A+ S
Sbjct: 160 -PAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHA--AAPAVS 216
Query: 338 LFVARTRRSNSSEALLV--DRAAGG---------GAGSPPAPLAPSASGPPVCKSSEVLY 386
L +N ALL AA G GA +PPAP APS P +
Sbjct: 217 LV------NNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP 270
Query: 387 ERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGG 446
P P PA +R G P P A P+ PA+ ++GG
Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAVPPPAA-----------------------AQNGG 307
Query: 447 GTGWGELP-PAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCG 505
G P PAA P +S + G P P A+S +++ P A +T
Sbjct: 308 SAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPP---AAQTLAAS 364
Query: 506 LPPEAAEGPEVHPNPLLWMPPPTRI--PSAGERSGHKNLALEGLRDWYIRNSGLAAGPQR 563
P A + P +P P + P+ G +G A + R R
Sbjct: 365 GPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIR 424
Query: 564 RPVLPSVGPPHPP 576
+ P+V P P
Sbjct: 425 ATLTPTVLAPRLP 437
Score = 38.1 bits (87), Expect = 0.026
Identities = 72/261 (27%), Positives = 88/261 (33%), Gaps = 63/261 (24%)
Query: 359 GGGAGSPPA------PLAPSASGPPVCK---SSEVLYERPQPTPAFSSRTAGP-PDPPRA 408
GGG P PL P+ PP K E P PA ++ AGP P P
Sbjct: 98 GGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGP 157
Query: 409 ARPSS-AAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRD 467
A+P+ AA A+R P P G P G G G P AA+ L+
Sbjct: 158 AKPAGPAALAARAGPGPGPGPG------------PGPGPGPGKPAGPGAAQT---LNGSA 202
Query: 468 GLLTMLPGPPPVYAADSNSP--LLRTKDPHTRAT--RTKP----CGLPPEAAEGPEVHP- 518
LL P + +N P LL P T +T P P AA P P
Sbjct: 203 ALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPA 262
Query: 519 --NPLLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPP 576
P PPP P+ R G AGP P+ P PP
Sbjct: 263 PAAPAAAPPPPPPAPAT-----------------LARPPGHPAGP------PTAAPAVPP 299
Query: 577 FLHARCYEVGQALYGAPSQAP 597
A + G + AP+ AP
Sbjct: 300 PAAA---QNGGSAGAAPAPAP 317
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 55.1 bits (131), Expect = 2e-07
Identities = 73/251 (29%), Positives = 85/251 (33%), Gaps = 52/251 (20%)
Query: 361 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 420
GAG PP P P A PP P P P + PP P A P G
Sbjct: 1016 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG--AGIPPPPPLPGAGIPPPPPLPGAG 1073
Query: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVY 480
P PP+ G G+P G G +PP +PG +P PPP+
Sbjct: 1074 IPPPPPLPG---------AGIPPPPPLPGAG-IPPPPPLPG---------VGIPPPPPLP 1114
Query: 481 AADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHK 540
A P P A P LP A P P P + +PPP +P AG
Sbjct: 1115 GAGIPPP-----PPLPGAGIPPPPPLP--GAGIPPPPPLPRVGIPPPPPLPGAGIPPPP- 1166
Query: 541 NLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPH 600
L G AG P LP VG P PP L G P PLP
Sbjct: 1167 --PLPG------------AGIPPPPPLPGVGIPPPPPLPG---------VGIPPPPPLPG 1203
Query: 601 SRSFTAPPVSG 611
+ PP+ G
Sbjct: 1204 AGIPPPPPLPG 1214
Score = 48.1 bits (113), Expect = 2e-05
Identities = 71/255 (27%), Positives = 86/255 (33%), Gaps = 57/255 (22%)
Query: 359 GGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPAS 418
G G PP P P + P + ++ PQP P + PP PP
Sbjct: 872 GLGMVPPPPPPLPGMTVPTLPSTAI-----PQPPPLQGTEMLPPPPPPL---------PG 917
Query: 419 RGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPP 478
G P PP+ G +L P G G +PP +PG +P PPP
Sbjct: 918 AGIPPPPPLPGAGILPLP-----PLPGAG-----IPPPPPLPG---------AAIPPPPP 958
Query: 479 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSG 538
+ A P P A P LP A P P P +PPP +P AG
Sbjct: 959 LPGAGIPLP-----PPLPGAGIPPPPPLP--GAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1011
Query: 539 HKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGA--PSQA 596
L G AG P LP G P PP L L GA P
Sbjct: 1012 P---PLPG------------AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1056
Query: 597 PLPHSRSFTAPPVSG 611
PLP + PP+ G
Sbjct: 1057 PLPGAGIPPPPPLPG 1071
Score = 47.8 bits (112), Expect = 3e-05
Identities = 76/292 (26%), Positives = 93/292 (31%), Gaps = 69/292 (23%)
Query: 361 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 420
GAG PP P P A PP P P + PP P A P G
Sbjct: 1060 GAGIPPPPPLPGAGIPP-------------PPPLPGAGIPPPPPLPGAGIPPPPPLPGVG 1106
Query: 421 APRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPG-------PLSRRDGLLTML 473
P PP+ G G+P G G +PP +PG PL R +
Sbjct: 1107 IPPPPPLPG---------AGIPPPPPLPGAG-IPPPPPLPGAGIPPPPPLPR-----VGI 1151
Query: 474 PGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSA 533
P PPP+ A P P A P LP P P P + +PPP +P A
Sbjct: 1152 PPPPPLPGAGIPPP-----PPLPGAGIPPPPPLPGVGIPPPP--PLPGVGIPPPPPLPGA 1204
Query: 534 GERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAP 593
G L G+ G+ P P G P PP L P
Sbjct: 1205 GIPPPP---PLPGM--------GIPPAPAPPLPPPGTGIPPPPLLPV----------SGP 1243
Query: 594 SQAPLPHSRSFTAPPVSGRYYADFLYPPELSARLSDLTLEGEQSSSSDTQTP 645
P S + P V G PP L + L L + ++ S P
Sbjct: 1244 PLLPQVGSSTLPTPQVCG------FLPPPLPSGLFGLGMNQDKGSRKQPIEP 1289
Score = 32.3 bits (72), Expect = 1.4
Identities = 47/201 (23%), Positives = 67/201 (33%), Gaps = 16/201 (7%)
Query: 206 LSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSR 265
+ E EEP A+ P P A ++ G + +KP P +K+
Sbjct: 370 VGEDAPQRLGEEPE---EEAQGPDAPAA----ASLPGSPAPSQRCFKPYPLITPCYIKTT 422
Query: 266 RNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMG 325
++SP P + + R P+ +R A + P H + G
Sbjct: 423 TRQLSSPNHSPSQSPNQSPRIKRRPEPSLSRGSRTALASVAAPAKKHRADGGLAA----G 478
Query: 326 FPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKS--SE 383
R+ +D ART R S LL A G LA ASG P
Sbjct: 479 LSRS---ADWTEELGARTPRVGGSAHLLERGVASDSGGGVSPALAAKASGAPAAADGFQN 535
Query: 384 VLYERPQPTPAFSSRTAGPPD 404
V R FS + GPP+
Sbjct: 536 VFTGRTLLEKLFSQQENGPPE 556
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 54.3 bits (129), Expect = 3e-07
Identities = 83/350 (23%), Positives = 126/350 (36%), Gaps = 47/350 (13%)
Query: 201 SESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSP-ERRTPWKPPPSDLY 259
S SS + E G S + P E P+P D + GG P ++ T K +
Sbjct: 807 SMSSGVGEMGDSQVSSNPTSS-PPGEAPAPVSV-DSEPSCKGGLPRDKPTKRKDVVAPKR 864
Query: 260 GDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCK----PEGLHSRQ 315
G LK SP S P SA +G + LT + K +
Sbjct: 865 GSLKE--------ASPGASKPGSARRSQGAVAKSVRTLTASENESMRKVMPITKSSRGAG 916
Query: 316 WSGSQDSQMGFPRADPASDRASLFVART---RRSNSSEALLVDRAAGGGAGSPPA---PL 369
W + S G P +P S +++ + R S +E + R + G + + P PL
Sbjct: 917 WRRPELSSRG-PSQNPPSSTDTVWSRQNSVRRASTGAEEQRLPRGSSGSSSTRPGRDVPL 975
Query: 370 APSAS--GPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPV 427
P S P + ++P+ + + GP P + S PR+P
Sbjct: 976 QPRGSFKKPSAKPLRNLPRQKPEENKTCRAHSEGPESPKEEPKTPSVPSVPHELPRVP-- 1033
Query: 428 CGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSP 487
S R S + +LPP A+ PG ++R + P AA +S
Sbjct: 1034 --------SFARNTVASSSRSMRTDLPPVAKAPG-ITRTVSQRQLRVKGDPEDAAPKDSS 1084
Query: 488 LLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERS 537
LR RA+ + PE+AEGP + P + AGER+
Sbjct: 1085 TLR------RASSARAPKKRPESAEGPSANTE------APLKARGAGERA 1122
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 53.1 bits (126), Expect = 8e-07
Identities = 87/360 (24%), Positives = 116/360 (32%), Gaps = 60/360 (16%)
Query: 185 LGMRLAQLSQEDVVLHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGS 244
L + AQ EDV S+ S S + P G + + P PP Q GG+
Sbjct: 11 LALSSAQNLNEDV---SQEESPSLIAGNPQGPSPQGG-NKPQGPPPPPGKPQGPPPQGGN 66
Query: 245 -----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTR 299
P P PPP GD R+ + P P P+ + +G P
Sbjct: 67 KPQGPPPPGKPQGPPPQ---GD--KSRSPRSPPGKPQGPPPQGGNQPQGPPPPP------ 115
Query: 300 GAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAG 359
PQ P+G + Q G P P D++ RS R+
Sbjct: 116 -GKPQGPPPQGGNRPQGPPPPGKPQGPP---PQGDKS--------RS--------PRSPP 155
Query: 360 GGAGSPPAPLAPSASGPPVCKSSEVLYERPQ-PTPAFSSRTAGPPDPPRAARPSSAAPAS 418
G PP GPP +PQ P P + GPP P + P S
Sbjct: 156 GKPQGPPPQGGNQPQGPPPPPG------KPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKS 209
Query: 419 RGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPP 478
R + P +G P GG G PP + GP + GPPP
Sbjct: 210 RSSQSPP----------GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN---KPQGPPP 256
Query: 479 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSG 538
+K R+ KP G P + P+ P P P + P AG+ G
Sbjct: 257 PGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQG 316
Score = 38.9 bits (89), Expect = 0.015
Identities = 52/191 (27%), Positives = 70/191 (36%), Gaps = 41/191 (21%)
Query: 228 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 282
P PP Q GG P P PPP GD R+S + P P P+
Sbjct: 172 PPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQ---GD--KSRSSQSPPGKPQGPPPQG 226
Query: 283 ASSFEGRSVPATPVLTRGAGPQLC-KPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVA 341
+ +G P P +G PQ KP+G G P+ PA + +
Sbjct: 227 GNQPQGP--PPPPGKPQGPPPQGGNKPQG----------PPPPGKPQGPPAQGGSK---S 271
Query: 342 RTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAG 401
++ RS + + G PP P A G P ++PQ PA + G
Sbjct: 272 QSARSPPGKPQGPPQQEGNNPQGPPPP----AGGNP---------QQPQAPPA--GQPQG 316
Query: 402 PPDPPRAARPS 412
PP PP+ RPS
Sbjct: 317 PPRPPQGGRPS 327
Score = 33.5 bits (75), Expect = 0.63
Identities = 59/244 (24%), Positives = 82/244 (33%), Gaps = 46/244 (18%)
Query: 228 PSPPKAWDQLRAVSGGS-----PERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 282
P PP Q GG+ P P PPP GD R+ + P P P+
Sbjct: 111 PPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQ---GD--KSRSPRSPPGKPQGPPPQG 165
Query: 283 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVAR 342
+ +G P PQ P+G Q G P P D++
Sbjct: 166 GNQPQGPPPPP-------GKPQGPPPQGGKKPQGPPPPGKPQGPP---PQGDKS------ 209
Query: 343 TRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQ-PTPAFSSRTAG 401
RS+ S G PP GPP +PQ P P ++ G
Sbjct: 210 --RSSQSPP--------GKPQGPPPQGGNQPQGPPPPPG------KPQGPPPQGGNKPQG 253
Query: 402 PPDPPRAARPSSAAPASRGAPRLPP--VCGDFLLDYSLDRGLPR-SGGGTGWGELPPAAE 458
PP P + P + + + R PP G + + +G P +GG + PPA +
Sbjct: 254 PPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 313
Query: 459 VPGP 462
GP
Sbjct: 314 PQGP 317
Score = 31.2 bits (69), Expect = 3.1
Identities = 18/66 (27%), Positives = 22/66 (33%)
Query: 361 GAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG 420
G P P P A G +S+ +PQ P P PP P G
Sbjct: 253 GPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAG 312
Query: 421 APRLPP 426
P+ PP
Sbjct: 313 QPQGPP 318
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 52.4 bits (124), Expect = 1e-06
Identities = 92/334 (27%), Positives = 119/334 (35%), Gaps = 73/334 (21%)
Query: 253 PPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLH 312
PPPSDL + +++ + P +L +A EG + GAG G
Sbjct: 605 PPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSA--------EGAG-------GPS 649
Query: 313 SRQWSGSQD-SQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAP 371
+SG D S + FP P S +L + L+ +G+PP P
Sbjct: 650 GEPFSGLGDLSPLLFP---PLSAPPTLIALNSA--------LLAATLDPPSGTPPQPCVL 698
Query: 372 SASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPR--LPPVCG 429
SA PQP P SS T DP A AP++ G P L P+ G
Sbjct: 699 SA---------------PQPGPPTSSVTTATTDP--GASSLGKAPSNSGRPPQLLSPLLG 741
Query: 430 DFLL-DYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPG---PPPVYAADSN 485
LL D S P G LP + PGPL L +LPG PPP+ A S
Sbjct: 742 ASLLGDLSSLTSSP--------GALPSLLQPPGPLLSGQLGLQLLPGGGAPPPLSEASSP 793
Query: 486 SPLLRTKDPHTRATRTKPCGLPPE---AAEGPEVHPNPLLWMPPPTRIP----------- 531
L PC LPPE +A PE PL + PP P
Sbjct: 794 LACLLQSLQIPPEQPEAPC-LPPESPASALEPEPARPPLSALAPPHGSPDPPVPELLTGR 852
Query: 532 SAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRP 565
+G+R L G+ G G +R P
Sbjct: 853 GSGKRGRRGGGGLRGINGEARPARGRKPGSRREP 886
Score = 47.8 bits (112), Expect = 3e-05
Identities = 121/454 (26%), Positives = 163/454 (35%), Gaps = 83/454 (18%)
Query: 250 PWKPPPSDLYGDLKSRRNSVASPTS---PTRSLPRSASS----FEGRSVPATPVLTRGAG 302
P PPPS L G + AS +S P++ PR + EGR P TP +R
Sbjct: 333 PPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRG-PQTPRRSRPRA 391
Query: 303 PQ-LCKPEGLH--SRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAG 359
P + +P L S+ S S +G P P+ S + + L
Sbjct: 392 PAPVPQPFSLPEPSQPILPSVLSLLGLPTPGPSHSDGSFNLLGSDAHLPPPPTL------ 445
Query: 360 GGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASR 419
+GSPP P P P S + P P +S+ P P + +
Sbjct: 446 -SSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVPSPVLQSPSEGLGMGAG 504
Query: 420 GAPRLPPVCGDFLLDY-SLDRGLPRSGGGTG--WGELPPAAEV----PGPLSRRD--GLL 470
A LPP+ G + S ++GL SG G G LP + P PL G+L
Sbjct: 505 PACPLPPLAGGEAFPFPSPEQGLALSGAGFPGMLGALPLPLSLGQPPPSPLLNHSLFGVL 564
Query: 471 TMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCG----LPPEAAEGPE------VHPNP 520
T G PP PLL P G L P EGP + P P
Sbjct: 565 TGGGGQPP------PEPLL-----------PPPGGPGPPLAPGEPEGPSLLVASLLPPPP 607
Query: 521 LLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRP------VLPSVGPP- 573
+PPP+ PS S LAL ++ A GP P + P + PP
Sbjct: 608 SDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPSGEPFSGLGDLSPLLFPPL 667
Query: 574 -HPPFLHARCYEVGQALYGAPSQAPLPHSRSFTA----PPVS--------------GRYY 614
PP L A + A PS P P +A PP S G+
Sbjct: 668 SAPPTLIALNSALLAATLDPPSGTP-PQPCVLSAPQPGPPTSSVTTATTDPGASSLGKAP 726
Query: 615 ADFLYPPELSARLSDLTLEGEQSSSSDTQTPGTL 648
++ PP+L + L +L G+ SS T +PG L
Sbjct: 727 SNSGRPPQLLSPLLGASLLGDLSSL--TSSPGAL 758
Score = 35.0 bits (79), Expect = 0.22
Identities = 66/260 (25%), Positives = 88/260 (33%), Gaps = 20/260 (7%)
Query: 360 GGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASR 419
GGA + P AP + ++ P P P+ P A+ SS P+ R
Sbjct: 305 GGAPTVEGPGAPPFLASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQR 364
Query: 420 GAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSR-RDGLLTMLPGPPP 478
PR PP F L PR +P +P P +L++L P P
Sbjct: 365 -RPRRPPTV--FRLLEGRGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTP 421
Query: 479 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEG-----PEVHPNPLLWMPPPTRIPSA 533
+ S L D H T G PP+ P L +P P+A
Sbjct: 422 GPSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAA 481
Query: 534 GERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGA- 592
+ + L+ + G+ AGP P+ P G PF E G AL GA
Sbjct: 482 SKAPVVPSPVLQSPSE----GLGMGAGP-ACPLPPLAGGEAFPFPSP---EQGLALSGAG 533
Query: 593 -PSQ-APLPHSRSFTAPPVS 610
P LP S PP S
Sbjct: 534 FPGMLGALPLPLSLGQPPPS 553
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 51.6 bits (122), Expect = 2e-06
Identities = 133/579 (22%), Positives = 196/579 (33%), Gaps = 126/579 (21%)
Query: 70 VRRRPPTARAYPPPHPNQAH--HSLCPAEELAL--EALEREVSVQQQIAAAAR-RLALAP 124
VR P + YP P +H PA + + E++ R S + + ++ P
Sbjct: 334 VRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNP 393
Query: 125 DL------STEQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVI 178
DL + E+RR+R Q + L + + + P + P + V+
Sbjct: 394 DLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPA----PRDRASPAAAEEVV 449
Query: 179 TTQGVCL-------------GMRLAQLSQEDVVLHSESSSLSES----GASHDNEEPHGC 221
CL L++ S + L++ S E +SH E
Sbjct: 450 PEWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPE----- 504
Query: 222 FSLAERPSP----PKAWDQLRAVSGG-SPERRTPWKPPPSDLY-------GDLKSRRNS- 268
LA PSP P +W G R+P + PP+ LY G L+
Sbjct: 505 --LARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQ 562
Query: 269 ----------VASPTS-PTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWS 317
V SP P + PR+AS + S+ P L +GA P
Sbjct: 563 PPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPP------------- 609
Query: 318 GSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPP 377
A P R+S + + +S + V GG +P++PS + P
Sbjct: 610 ---------SPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDI----SPVSPSRAWSP 656
Query: 378 VCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSL 437
K + P P+FS+R AG R ++ P + GA R P LD +
Sbjct: 657 RAKQA--------PRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPS-----SLDGWV 703
Query: 438 DRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADS------------- 484
G G G+ PP P P+S ++ P P A
Sbjct: 704 SPGPWEPGRGSSMSS-PPPLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNII 762
Query: 485 NSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLAL 544
N+ ++ P + PP A P P P PP R P R G + A+
Sbjct: 763 NAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPP----PPRMRSPQPA-RPG--SAAV 815
Query: 545 EGLRDWYIRNSGLAAGPQ--RRPVLPSVGPPHPPFLHAR 581
G I S L AGP P P PP PFL+ R
Sbjct: 816 PGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPR-PFLYRR 853
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 51.2 bits (121), Expect = 3e-06
Identities = 114/428 (26%), Positives = 153/428 (35%), Gaps = 102/428 (23%)
Query: 227 RPSPPKAWDQLRAVSGGSPERRTP----WKPPPSDLYGDLKSRRNSVASPTSPTRSLPRS 282
+P PP ++ +P + P WKPPP L S R +P + P S
Sbjct: 143 KPPPPPRQLSVKDTVPRAPSQFPPPLETWKPPPP-----LPSERQPADRRITPALATPAS 197
Query: 283 ASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQ--DSQMGFPRADPASDRASLFV 340
+ E ++ P T G P H+ + +Q DS+ G + ++ +
Sbjct: 198 PPT-ESQAGPRNQGQTAGRARGGAPP---HAGEGEMAQPADSESGLSLLCKITFKSRPSL 253
Query: 341 ARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFS---- 396
A S+S L + GGG G +ASG +EVL + P P A
Sbjct: 254 APPAASSS---LAAKASLGGGGGGGLF----AASG--AISYAEVLKQGPLPPGAARPLGE 304
Query: 397 -SRTA-----GPPDPPRAARPSSAAPASRGAPRLPPVCGDF-----LLDY-SLDRGLPR- 443
SR A G D + P SA PAS+ PP F D+ S G R
Sbjct: 305 VSRGAQEAEGGDGDGEGCSGPPSA-PASQARALPPPPYTTFPGSKPKFDWVSAPDGPERH 363
Query: 444 -----SGGGTG------------WGELPPAAE----VPGPLSRRDGLLTMLPGPPPVYAA 482
+GGG G WG PP E PGP RR + P P ++ A
Sbjct: 364 FRFNGAGGGIGAPRRRAAALSGPWGSPPPPPEQIHSAPGP--RRPAPALLAP-PTFIFPA 420
Query: 483 DSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNL 542
+N +R P + P PP + P + P PL PP T GHK
Sbjct: 421 PTNGEPMRPGPPGLQELPPLPPPTPPPTLQPPALQPTPLPVAPPLT------PGLGHKES 474
Query: 543 ALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSR 602
AL P+ P PP L A QA APS AP P +
Sbjct: 475 AL----------------------APTAAPALPPALAA-----DQA--PAPSPAPAP-TV 504
Query: 603 SFTAPPVS 610
+ +PPVS
Sbjct: 505 AEPSPPVS 512
Score = 35.8 bits (81), Expect = 0.13
Identities = 60/254 (23%), Positives = 82/254 (32%), Gaps = 65/254 (25%)
Query: 222 FSLAERPSPPKAWDQLRAVSGG--SPERRT-----PW---KPPPSDLYGDLKSRRNSVAS 271
F P P+ + GG +P RR PW PPP ++ RR + A
Sbjct: 351 FDWVSAPDGPERHFRFNGAGGGIGAPRRRAAALSGPWGSPPPPPEQIHSAPGPRRPAPAL 410
Query: 272 PTSPTRSLPRSASSFEGRSVPA----TPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFP 327
PT P + R P P L P +P L P
Sbjct: 411 LAPPTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPPPTLQPPALQPTP----------LP 460
Query: 328 RADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYE 387
A P + G G + LAP+A+ P + +
Sbjct: 461 VAPPLTP--------------------------GLGHKESALAPTAA--PALPPALAADQ 492
Query: 388 RPQPTPAFSSRTAGPPDPPRAARPSSAAP------------ASRGAPRLPPVCGDFLLDY 435
P P+PA + T P PP +A +AAP A+RGA R + GD +
Sbjct: 493 APAPSPA-PAPTVAEPSPPVSAPAPAAAPIKTRTRRNKGSRAARGATRKDGLHGDGPRER 551
Query: 436 SLDRGLPRSGGGTG 449
+ SGGG G
Sbjct: 552 ATATVPDSSGGGGG 565
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 50.4 bits (119), Expect = 5e-06
Identities = 117/453 (25%), Positives = 150/453 (33%), Gaps = 68/453 (15%)
Query: 227 RPSPPKAWDQLRAVSGGSPERRTPWKPP----PSDLYGDLKSRRNSVASPTSPTRSLPRS 282
RP PP + ++VS S T P PS G + S++S +P S RS
Sbjct: 188 RPRPPTEGPR-KSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 246
Query: 283 ASSFEGRS-VPATPVLTRGAGPQLCKPEG--------------LHSRQWSGSQDSQMGFP 327
S G PA P + G Q +P L S + S P
Sbjct: 247 GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSP 306
Query: 328 RADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYE 387
A P+ A T S ++ +L + P PL+P A+ PP + L
Sbjct: 307 SAPPSLQTLPSPPA-TPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALAL-- 363
Query: 388 RPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG-----APRLPPVCGDFLLDYSLDRGLP 442
P A S A PP P A PS AP + AP PP +S P
Sbjct: 364 --PPLQAPPSPPASPPLSP-LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 420
Query: 443 RSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTK 502
S T + PP+ P PL +P PP S S + P A
Sbjct: 421 VSPSATPPSQAPPSLAAP-PL--------QVPPSPPASPPMSPSATPPPQAPPPLAAPPL 471
Query: 503 PCGLPPEAAEGPEVHPNPLLWMP-PPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGP 561
PP A P + PL +P PP P S +L + L P
Sbjct: 472 QLAKPPPQAP-PALATPPLQALPSPPASFPGQAPFSPSASLPMSPL---------ATPPP 521
Query: 562 QRRPVLPS---VGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAPPVSGRYYADFL 618
Q PVL + PP PP AP + P P + + P A
Sbjct: 522 QAPPVLAAPLLQVPPSPP---------ASPTLQAPRRPPTPGPDTSVSGPRLTLALAP-- 570
Query: 619 YPPELSARLSDLTLEGEQ---SSSSDTQTPGTL 648
PP +R TL G SSS T TP L
Sbjct: 571 GPPPPPSRSPSSTLSGPDLAGHSSSATSTPEEL 603
Score = 44.7 bits (104), Expect = 3e-04
Identities = 100/430 (23%), Positives = 136/430 (31%), Gaps = 57/430 (13%)
Query: 227 RPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSF 286
RP PP LR + R P + G + A PTR+ AS
Sbjct: 34 RPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGG---ATIPESAPRAGPTRTSRPPASGR 90
Query: 287 EGRSVPAT-----PVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVA 341
R+ PA PV + G +P L + S + + +A A R++L A
Sbjct: 91 GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALS-A 149
Query: 342 RTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAG 401
RR S G P +P+ + +EV RP P+ T G
Sbjct: 150 GARRDTS--------------GPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEG 195
Query: 402 PPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPG 461
P +A S S A R P G L R RS + PA G
Sbjct: 196 PRKSVSSASEHSTTEPSPAARRRPSAGG------GLQRPASRSLSSSATPLSSPARS--G 247
Query: 462 PLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNP- 520
P +R P P + P T A P P A P P+P
Sbjct: 248 PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPS 307
Query: 521 ----LLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRN--SGLAAGPQRRP----VLPSV 570
L +P P P + + + L+ + S LA P + P + P
Sbjct: 308 APPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQ 367
Query: 571 GPPHPPFL--------------HARCYEVGQALYGAPSQAPLPHSRSFTA-PPVSGRYYA 615
PP PP +A + QA + P P+ S A PPVS
Sbjct: 368 APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 427
Query: 616 DFLYPPELSA 625
PP L+A
Sbjct: 428 PSQAPPSLAA 437
Score = 34.3 bits (77), Expect = 0.37
Identities = 49/212 (23%), Positives = 60/212 (28%), Gaps = 39/212 (18%)
Query: 406 PRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRG------LPRSGGGTGWGELPPAAEV 459
P A P P G+PR PP L G L GG G +P +A
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 460 PGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPN 519
GP PP +P + P GP P
Sbjct: 77 AGPTR---------TSRPPASGRGERAPPAKNTSP------------------GPVSSPG 109
Query: 520 PLLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLH 579
P + G R + G + S L+AG +R P+ G P P
Sbjct: 110 RASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM-- 167
Query: 580 ARCYEVGQALYGAPSQAPLPHSRSFTAPPVSG 611
AR G P AP R PP G
Sbjct: 168 ARRSRAAGTEVGLPRPAPSARPR----PPTEG 195
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 50.1 bits (118), Expect = 6e-06
Identities = 71/251 (28%), Positives = 80/251 (31%), Gaps = 75/251 (29%)
Query: 355 DRAAG-GGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSS 413
DR G G G PP P P+ PP RP P GPP P + P
Sbjct: 215 DRFPGPAGPGGPPPPF-PAGQTPP----------RPPLGPPGPPGPPGPPPPGQVLPPPL 263
Query: 414 AAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPA--------AEVPGPLSR 465
A P +RG PPV L G P G G LPP PGP
Sbjct: 264 AGPPNRGDRPPPPV---------LFPGQP--FGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312
Query: 466 RDGLLTMLPGP-PPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWM 524
+ G PGP PP PL PH PP A P H NP +
Sbjct: 313 QQG-PPPPPGPFPPRPPGPLGPPLTLAPPPHLPG--------PPPGAPPPAPHVNP-AFF 362
Query: 525 PPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYE 584
PPPT NSG+ R P PP P+ Y+
Sbjct: 363 PPPT-------------------------NSGMPTSDSRGP------PPTDPYGRPPPYD 391
Query: 585 VGQALYGAPSQ 595
G YG P +
Sbjct: 392 RGD--YGPPGR 400
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 49.7 bits (117), Expect = 8e-06
Identities = 85/349 (24%), Positives = 122/349 (34%), Gaps = 79/349 (22%)
Query: 200 HSESSSLSESGASHDNEEP------HGCFSLAERPSP-----PKAWDQLRAVSGGSPERR 248
+ +SSS S S +S ++E P +G R SP P + + S RR
Sbjct: 489 NQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRR 548
Query: 249 TPWKPPPSDLYGDLKSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKP 308
+P PP +RR SP P R R+ + R P+ P R P+ P
Sbjct: 549 SPSPPP---------TRRRRSPSPAPPPRRR-RTPTPPPRRRTPSPPPRRRSPSPRRYSP 598
Query: 309 EGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAP 368
R++S P P AS RR++ S PP
Sbjct: 599 P--IQRRYS---------PSPPPKRRTASPPPPPKRRASPS---------------PPPK 632
Query: 369 LAPSASGPPVCKSSEVLYERPQP---------TPAFSSRTAGPPDPPRAARPSSAAPASR 419
S S PP +SS V R +P+ S+R A P P + PS A +
Sbjct: 633 RRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQ 692
Query: 420 GAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPV 479
+ PPV R G + P + P P +R ++ P P +
Sbjct: 693 TSSSPPPV---------------RRGASSS----PQRRQSPSPSTRPIRRVSRTPEPKKI 733
Query: 480 YAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPT 528
A S SP + +R+ G P AA+ P P+P+ P T
Sbjct: 734 KKAASPSPQSVRRVSSSRSV----SGSPEPAAKKPPAPPSPVQSQSPST 778
Score = 36.6 bits (83), Expect = 0.074
Identities = 54/203 (26%), Positives = 70/203 (34%), Gaps = 37/203 (18%)
Query: 225 AERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASP-----TSPTRSL 279
A P PPK RA P+RR PPP + RR+ S +SP+RS
Sbjct: 615 ASPPPPPKR----RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRST 670
Query: 280 PRSASSFEGRSVPATPVLTRGAGPQL-CKPEGLHSRQWSGSQDSQMGFPRADP------- 331
+ S + +P R PQ P + S Q Q P P
Sbjct: 671 REARSPQPNKRHSPSP---RPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRT 727
Query: 332 -----ASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEV-- 384
AS RR +SS + V + A PPAP +P S P S
Sbjct: 728 PEPKKIKKAASPSPQSVRRVSSSRS--VSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVP 785
Query: 385 LYERPQPTPAFSSRTAGPPDPPR 407
+ + PTP+ P PPR
Sbjct: 786 VKKAKSPTPS--------PSPPR 800
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 49.3 bits (116), Expect = 1e-05
Identities = 117/459 (25%), Positives = 155/459 (33%), Gaps = 73/459 (15%)
Query: 203 SSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDL 262
SS+ S + G PS PK + + P + TP + + G L
Sbjct: 244 SSATPLSSPARSGPSARGTPRAPAHPSQPKP----KGLQALRPPQVTPPRKDAAPALGPL 299
Query: 263 KSRRNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDS 322
S + +A+P SP+ +L A ++PATP + QL P L S
Sbjct: 300 SS--SPLATP-SPSAALQSQAPP----TLPATPH-SSSLTCQLATPLPLAPPSPSAPPSL 351
Query: 323 Q-MGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKS 381
Q + P A P S + + T ++ S P PL+P A+ PP
Sbjct: 352 QTLPSPPATPPSQATTSLGSPTLQATHSFL-------------PSPPLSPLATPPPQAPP 398
Query: 382 SEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRG-----APRLPPVCGDFLLDYS 436
+ L P A S A PP P A PS AP + AP PP +S
Sbjct: 399 ALAL----PPLQAPPSPPASPPLSP-LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 453
Query: 437 LDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHT 496
P S T + PP+ P PL +P PP S S + P
Sbjct: 454 PPASPPVSPSATPPSQAPPSLAAP-PL--------QVPPSPPASPPMSPSATPPPQAPPP 504
Query: 497 RATRTKPCGLPPEAAEGPEVHPNPLLWMP-PPTRIPSAGERSGHKNLALEGLRDWYIRNS 555
A PP A P + PL +P PP P S +L + L
Sbjct: 505 LAAPPLQLAKPPPQAP-PALATPPLQALPSPPASFPGQAPFSPSASLPMSPL-------- 555
Query: 556 GLAAGPQRRPVLPS---VGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAPPVSGR 612
PQ PVL + PP PP AP + P P + + P
Sbjct: 556 -ATPPPQAPPVLAAPLLQVPPSPP---------ASPTLQAPRRPPTPGPDTSVSGPRLTL 605
Query: 613 YYADFLYPPELSARLSDLTLEGEQ---SSSSDTQTPGTL 648
A PP +R TL G SSS T TP L
Sbjct: 606 ALAP--GPPPPPSRSPSSTLSGPDLAGHSSSATSTPEEL 642
Score = 42.0 bits (97), Expect = 0.002
Identities = 104/464 (22%), Positives = 146/464 (31%), Gaps = 86/464 (18%)
Query: 227 RPSPPKAWDQLRAVSGGSPERRTPWK-----------PPPSDLYGDLKSRRNSVASPTSP 275
RP PP LR + R P P + G +S S +P S
Sbjct: 34 RPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASR 93
Query: 276 TRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDR 335
+ R + ++ PV + G +P L + S + + +A A R
Sbjct: 94 PPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKR 153
Query: 336 ASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAF 395
++L A RR S G P +P+ + +EV RP P+
Sbjct: 154 SALS-AGARRDTS--------------GPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP 198
Query: 396 SSRTAGP--------------PDPPRAARPSSAA----PASRGAPRLPPVCGDFLLDYSL 437
T GP P P RPS+ PASR
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPS 258
Query: 438 DRGLPRSGG------GTGWGELPP---------AAEVPGPLSRRDGLLTMLPGPPPVYAA 482
RG PR+ G L P AA GPLS + L P P A
Sbjct: 259 ARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS-----SPLATPSPSAAL 313
Query: 483 DSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNL 542
S +P PH+ + + P A P P+ L +P P P + + +
Sbjct: 314 QSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPS-LQTLPSPPATPPSQATTSLGSP 372
Query: 543 ALEGLRDWYIRN--SGLAAGPQRRP----VLPSVGPPHPPFL--------------HARC 582
L+ + S LA P + P + P PP PP +A
Sbjct: 373 TLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA 432
Query: 583 YEVGQALYGAPSQAPLPHSRSFTA-PPVSGRYYADFLYPPELSA 625
+ QA + P P+ S A PPVS PP L+A
Sbjct: 433 VHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA 476
Score = 38.1 bits (87), Expect = 0.026
Identities = 52/213 (24%), Positives = 65/213 (30%), Gaps = 32/213 (15%)
Query: 406 PRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDRG------LPRSGGGTGWGELPPAAEV 459
P A P P G+PR PP L G L GG G +P +A
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 460 PGPLSRRDGLLTMLPGP-PPVYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHP 518
GP +R G + P PP +P + P GP P
Sbjct: 77 AGP-TRSAGTSSRNPASRPPASGRGERAPPAKNTSP------------------GPVSSP 117
Query: 519 NPLLWMPPPTRIPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFL 578
P + G R + G + S L+AG +R P+ G P P
Sbjct: 118 GRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM- 176
Query: 579 HARCYEVGQALYGAPSQAPLPHSRSFTAPPVSG 611
AR G P AP R PP G
Sbjct: 177 -ARRSRAAGTEVGLPRPAPSARPR----PPTEG 204
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 49.3 bits (116), Expect = 1e-05
Identities = 85/333 (25%), Positives = 106/333 (31%), Gaps = 63/333 (18%)
Query: 206 LSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSR 265
L+ S A NE+ S E PS + R GG+ +RTP PPP G
Sbjct: 11 LALSSAQSLNED----VSQEESPSVISGKPEGRRPQGGNQPQRTP--PPPGKPEGRPPQG 64
Query: 266 RNSVASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDS--Q 323
N P P P G ++G P+ KPEG + + SQ +
Sbjct: 65 GNQSQGPP-PRPGKPEGPPPQGGNQ-------SQGPPPRPGKPEGQPPQGGNQSQGPPPR 116
Query: 324 MGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSE 383
G P P N S+ G PP P P GPP ++
Sbjct: 117 PGKPEGPPPQG-----------GNQSQ------------GPPPRPGKPE--GPPPQGGNQ 151
Query: 384 VLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDR---- 439
+ P P P + GPP P+ S P G P PP G R
Sbjct: 152 S--QGPPPRPG---KPEGPP--PQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKP 204
Query: 440 -GLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYAADSNSPLLRTKDPHTRA 498
G P GG G P + GP S+ GPPP P P
Sbjct: 205 EGPPPQGGNQSQGPPPRPGKPEGPPSQGGN---KPQGPPPHPGKPQGPPPQEGNKPQRPP 261
Query: 499 TRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIP 531
+P G PP NP +PPP P
Sbjct: 262 PPGRPQGPPPPGG-------NPQQPLPPPAGKP 287
Score = 37.7 bits (86), Expect = 0.033
Identities = 63/238 (26%), Positives = 74/238 (31%), Gaps = 50/238 (21%)
Query: 388 RPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAPRLPPVCGDFLLDYSLDR-----GLP 442
+PQ TP + G P P+ S P G P PP G R G P
Sbjct: 46 QPQRTPPPPGKPEGRP--PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQP 103
Query: 443 RSGGGTGWGELPPAAEVPGPLSRRDGLLTMLP-------GPPPVYAADSNSPLLRTKDPH 495
GG G P + GP + P GPPP S P R
Sbjct: 104 PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP---- 159
Query: 496 TRATRTKPCGLPPEA---AEGPEVHPNPLLWMPPPTRIPSAG--ERSGHKNLALEGLRDW 550
KP G PP+ ++GP HP PP S G R G EG
Sbjct: 160 -----GKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKP----EGPPP- 209
Query: 551 YIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAPP 608
+ + GP RP P GPP + G Q P PH PP
Sbjct: 210 --QGGNQSQGPPPRPGKPE-GPP--------------SQGGNKPQGPPPHPGKPQGPP 250
Score = 30.8 bits (68), Expect = 4.1
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 10/64 (15%)
Query: 363 GSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAP 422
G PP P P GPP + ++ +RP P R GPP P P P G P
Sbjct: 238 GPPPHPGKPQ--GPPPQEGNKP--QRPPPP----GRPQGPPPP--GGNPQQPLPPPAGKP 287
Query: 423 RLPP 426
+ PP
Sbjct: 288 QGPP 291
Score = 30.8 bits (68), Expect = 4.1
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 365 PPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARP 411
PP P P PP QP P + + GPP PP+ RP
Sbjct: 260 PPPPGRPQGPPPPGGNPQ-------QPLPPPAGKPQGPPPPPQGGRP 299
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 48.9 bits (115), Expect = 1e-05
Identities = 91/374 (24%), Positives = 125/374 (33%), Gaps = 76/374 (20%)
Query: 216 EEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRR-----NSVA 270
E P L + P +D + G P P L+ S R +S
Sbjct: 134 EPPSSGSPLLSQLGQPSIFDTQKGQGPGGDGFYLPTAGAPGSLHSHAPSARTPGGGHSSG 193
Query: 271 SPTSPTRSLPRSASSFEGRSVPATPVL----TRGAGPQLCKPEGL----HSRQWSGSQDS 322
+P + S A GR P+ R G + P G+ + G QD
Sbjct: 194 APAKGSSSRDGPAKERAGRGGEPPPLFGKKDPRARGEEASGPRGVVDLTQEARAEGRQDR 253
Query: 323 QMGFPRADPASDRASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPL------------- 369
G PR ++R S F+A ++ N++ V GGAG P
Sbjct: 254 --GPPRL---AERLSPFLAESKTKNAALQPSVLTMCNGGAGDVGLPALVAEAGRGGAKEA 308
Query: 370 APSASGPPVCKSSEVLYERPQPTPAF----SSRTAGPPDPPRAARPSSAAPASRG----- 420
A G + + +E L P+P P+ + GPP PP AA P+ R
Sbjct: 309 ARQDEGARLLRRTETLLPGPRPCPSPLPPPPAPPKGPPAPP-AATPAGVYTVFREQGREH 367
Query: 421 ---APRLPPVCGDF--------LLDYSLD-RGLPRSGGGTGWGELPPAAEVPGPLSRRDG 468
AP P F + + D R R G G + PP + P PL R +G
Sbjct: 368 RVVAPTFVPSVEAFDERPGPIQIASQARDARAREREAGRPGVLQAPPGS--PRPLDRPEG 425
Query: 469 L------LTMLPGPPPVYAADSNSPLLRTKDPHTRATRTKP---CGLPPEAAEGPEVHPN 519
L + L PPP A P RATR P +P + PE P
Sbjct: 426 LREKNSVIRSLKRPPPADA------------PTVRATRASPDPRAYVPAKELLKPEADPR 473
Query: 520 PLLWMPPPTRIPSA 533
P P P+A
Sbjct: 474 PCERAPRGPAGPAA 487
Score = 38.5 bits (88), Expect = 0.020
Identities = 52/226 (23%), Positives = 78/226 (34%), Gaps = 26/226 (11%)
Query: 201 SESSSLSESGASHDNEEPHG-CFSLAERPSPPKAWDQLRAVSGGSPERRTPWKP---PPS 256
S+ + + G + +EEP +PS D+ + G+P P P PS
Sbjct: 2308 SKDTGEGKDGGTAGSEEPGAKARGRGRKPSAKAKGDRAATLEEGNPTDEVPSTPLALEPS 2367
Query: 257 DLYGDLKSRRNSV---------------ASPTSPTRSLPRSASSFEGRSVPAT-----PV 296
G KS V SP P + + F PAT P+
Sbjct: 2368 STPGSKKSPPEPVDKRAKAPKARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPAPL 2427
Query: 297 LTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASLFVARTRRSNSSEALLVDR 356
+T A KP+ + + SG++ + A+ V + + EALL+
Sbjct: 2428 ITMPATRP--KPKKARAAEESGAKGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLRE 2485
Query: 357 AAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGP 402
G G P L S PP SSE P+ T ++ GP
Sbjct: 2486 DPGAGGWQEPKSLLSLGSYPPAAGSSEPKAPWPKATDGDLAQEPGP 2531
Score = 30.8 bits (68), Expect = 4.1
Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 327 PRADPASDRASLFVAR--TRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEV 384
P A DRA+ T S+ L + G SPP P+ A P +
Sbjct: 2336 PSAKAKGDRAATLEEGNPTDEVPSTPLALEPSSTPGSKKSPPEPVDKRAKAPKARPAP-- 2393
Query: 385 LYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGAP 422
PQP+PA + T+ P P A P APA+ AP
Sbjct: 2394 ----PQPSPAPPAFTSCPAPEPFAELP---APATSLAP 2424
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 47.8 bits (112), Expect = 3e-05
Identities = 46/157 (29%), Positives = 59/157 (37%), Gaps = 25/157 (15%)
Query: 365 PPAPLAPSAS---GPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSSAAPASRGA 421
P AP AP +S PPV +SS+ P A + G P PP P P
Sbjct: 506 PRAPHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDD 565
Query: 422 PRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPPVYA 481
P LPP DF+ E PP P P S + LP PPP
Sbjct: 566 PELPPPPPDFM-------------------EPPPDFVPPPPPSYAGIAGSELPPPPPPPP 606
Query: 482 ADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHP 518
A + +P+ + P + P +PP+ E P HP
Sbjct: 607 APAPAPVPDSARPPPAVAKRPP--VPPKRQENPG-HP 640
Score = 33.1 bits (74), Expect = 0.82
Identities = 44/166 (26%), Positives = 63/166 (37%), Gaps = 32/166 (19%)
Query: 327 PRADPASDRASLF----VARTRRSNSSEA--LLVDRAAGGGAGSPPAPLAPSASGPPVCK 380
PRA P + ++SL V R+ ++ S A L GGG +PP P PP
Sbjct: 506 PRA-PHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLD 564
Query: 381 SSEVLYERP---QPTPAF------------SSRTAGPPDPPRAARPSSAAPASRGAP--- 422
E+ P +P P F S PP PP A P+ ++R P
Sbjct: 565 DPELPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPPPPPPPAPAPAPVPDSARPPPAVA 624
Query: 423 RLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDG 468
+ PPV + P GG G GE +++ L ++ G
Sbjct: 625 KRPPV-------PPKRQENPGHPGGAGGGEQDFMSDLMKALQKKRG 663
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,786,291
Number of Sequences: 37866
Number of extensions: 2291296
Number of successful extensions: 16161
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 1130
Number of HSP's that attempted gapping in prelim test: 11716
Number of HSP's gapped (non-prelim): 4483
length of query: 649
length of database: 18,247,518
effective HSP length: 109
effective length of query: 540
effective length of database: 14,120,124
effective search space: 7624866960
effective search space used: 7624866960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.