Guide to the Human Genome
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Name: FRMD4B Sequence: fasta or formatted (1034aa) NCBI GI: 150010540
Description:

FERM domain containing 4B

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         51           3
 C cysteine            1.5         15           1
 D aspartate           5.2         54           2
 E glutamate           7.1         73           2
 F phenylalanine       3.3         34           2
 G glycine             5.0         52           2
 H histidine           2.7         28           1
 I isoleucine          4.0         41           2
 K lysine              7.3         75           3
 L leucine             9.5         98           2
 M methionine          1.3         13           1
 N asparagine          2.9         30           1
 P proline             5.0         52           2
 Q glutamine           5.9         61           2
 R arginine            6.4         66           3
 S serine             11.4        118           3
 T threonine           6.0         62           3
 V valine              4.8         50           2
 W tryptophan          1.2         12           2
 Y tyrosine            4.7         49           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FERM domain containing 4B 
FRMD4A                0.401   FERM domain containing 4A 
RDX                   0.063   radixin 
MSN                   0.062   moesin 
EZR                   0.061   ezrin 
EZR                   0.061   ezrin 
NF2                   0.061   neurofibromin 2 isoform 2 
NF2                   0.061   neurofibromin 2 isoform 2 
NF2                   0.061   neurofibromin 2 isoform 2 
NF2                   0.061   neurofibromin 2 isoform 1 
CCDC120               0.057   coiled-coil domain containing 120 isoform 3 
CCDC120               0.057   coiled-coil domain containing 120 isoform 1 
C1orf106              0.056   hypothetical protein LOC55765 isoform 1 
CCDC120               0.056   coiled-coil domain containing 120 isoform 4 
CCDC120               0.056   coiled-coil domain containing 120 isoform 2 
C1orf106              0.055   hypothetical protein LOC55765 isoform 2 
NF2                   0.050   neurofibromin 2 isoform 5 
EPB41L1               0.042   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.042   erythrocyte membrane protein band 4.1-like 1 isoform...
FRMD5                 0.040   FERM domain containing 5 isoform 2 
NF2                   0.040   neurofibromin 2 isoform 6 
EPB41L2               0.040   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.040   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.040   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41L5               0.039   erythrocyte membrane protein band 4.1 like 5 
EPB41L3               0.038   erythrocyte membrane protein band 4.1-like 3 
PTPN21                0.038   protein tyrosine phosphatase, non-receptor type 21 ...
NF2                   0.037   neurofibromin 2 isoform 7 
NF2                   0.037   neurofibromin 2 isoform 7 
PTPN14                0.037   protein tyrosine phosphatase, non-receptor type 14 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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