Guide to the Human Genome
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Name: HSD17B13 Sequence: fasta or formatted (264aa) NCBI GI: 210032112
Description:

hydroxysteroid (17-beta) dehydrogenase 13 isoform B

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Steroid Hormones

Other entries for this name:
alt prot [300aa] hydroxysteroid (17-beta) dehydrogenase 13 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         13           2
 C cysteine            1.5          4           1
 D aspartate           2.3          6           1
 E glutamate           5.7         15           2
 F phenylalanine       4.9         13           2
 G glycine             6.8         18           1
 H histidine           2.7          7           1
 I isoleucine         10.6         28           2
 K lysine              7.2         19           2
 L leucine            10.6         28           4
 M methionine          2.3          6           2
 N asparagine          4.5         12           2
 P proline             3.8         10           1
 Q glutamine           2.7          7           1
 R arginine            4.2         11           2
 S serine              5.7         15           2
 T threonine           7.2         19           2
 V valine              8.7         23           2
 W tryptophan          1.1          3           1
 Y tyrosine            2.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hydroxysteroid (17-beta) dehydrogenase 13 isoform B... 
HSD17B13              0.962   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
HSD17B11              0.602   estradiol 17-beta-dehydrogenase 11 
SDR16C5               0.316   epidermal retinal dehydrogenase 2 
SDR16C6               0.298   short chain dehydrogenase/reductase family 16C, mem...
RDH10                 0.238   retinol dehydrogenase 10 
DHRS3                 0.212   dehydrogenase/reductase (SDR family) member 3 
DHRS7                 0.114   dehydrogenase/reductase (SDR family) member 7 
DHRS7B                0.100   dehydrogenase/reductase (SDR family) member 7B [Homo...
CBR4                  0.080   carbonic reductase 4 
DHRS11                0.080   short-chain dehydrogenase/reductase 
BDH2                  0.080   3-hydroxybutyrate dehydrogenase, type 2 
RDH8                  0.078   retinol dehydrogenase 8 (all-trans) 
DHRS7C                0.078   dehydrogenase/reductase (SDR family) member 7C [Hom...
DHRS4                 0.074   peroxisomal short-chain alcohol dehydrogenase 
RDH12                 0.070   retinol dehydrogenase 12 
HSD11B1               0.064   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.064   11-beta-hydroxysteroid dehydrogenase 1 
HSD17B4               0.062   hydroxysteroid (17-beta) dehydrogenase 4 
HSD17B6               0.062   hydroxysteroid (17-beta) dehydrogenase 6 
HSD17B1               0.060   hydroxysteroid (17-beta) dehydrogenase 1 
HSD17B14              0.060   dehydrogenase/reductase (SDR family) member 10 [Homo...
HSDL1                 0.060   hydroxysteroid dehydrogenase like 1 isoform a [Homo...
RDH13                 0.058   retinol dehydrogenase 13 isoform 1 
RDH11                 0.058   retinol dehydrogenase 11 
HPGD                  0.058   hydroxyprostaglandin dehydrogenase 15-(NAD) isoform ...
DHRS4L1               0.056   dehydrogenase/reductase (SDR family) member 4 like ...
DHRS4L2               0.056   dehydrogenase/reductase (SDR family) member 4 like ...
HSD17B12              0.054   hydroxysteroid (17-beta) dehydrogenase 12 
BDH1                  0.052   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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