Guide to the Human Genome
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Name: ZNF181 Sequence: fasta or formatted (571aa) NCBI GI: 224586802
Description:

zinc finger protein 181 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [570aa] zinc finger protein 181 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6         15           2
 C cysteine            4.7         27           2
 D aspartate           2.3         13           1
 E glutamate           8.6         49           2
 F phenylalanine       3.5         20           1
 G glycine             5.3         30           2
 H histidine           6.3         36           2
 I isoleucine          5.1         29           2
 K lysine             10.9         62           2
 L leucine             6.8         39           2
 M methionine          1.6          9           2
 N asparagine          4.9         28           1
 P proline             3.5         20           1
 Q glutamine           3.9         22           1
 R arginine            4.6         26           2
 S serine             10.9         62           2
 T threonine           5.4         31           1
 V valine              4.4         25           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.9         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 181 isoform 1 
ZNF181                0.995   zinc finger protein 181 isoform 2 
ZNF302                0.599   zinc finger protein 302 
ZNF302                0.599   zinc finger protein 302 
ZNF583                0.450   zinc finger protein 583 
ZNF583                0.450   zinc finger protein 583 
ZNF583                0.450   zinc finger protein 583 
ZNF570                0.412   zinc finger protein 570 
ZNF527                0.411   zinc finger protein 527 
ZNF470                0.408   zinc finger protein 470 
LOC100129800          0.407   PREDICTED: similar to zinc finger protein 181 [Homo...
LOC100129800          0.407   PREDICTED: similar to zinc finger protein 181 [Homo...
ZNF184                0.403   zinc finger protein 184 
DKFZp686E2433         0.399   hypothetical protein LOC345462 
ZNF471                0.398   zinc finger protein 471 
ZNF420                0.395   zinc finger protein 420 
ZNF135                0.393   zinc finger protein 135 
ZFP14                 0.392   zinc finger protein 14-like 
ZNF568                0.390   zinc finger protein 568 
ZNF790                0.390   zinc finger protein 790 
ZNF569                0.389   zinc finger protein 569 
ZNF287                0.389   zinc finger protein 287 
ZNF624                0.387   zinc finger protein 624 
ZNF85                 0.383   zinc finger protein 85 
ZNF780A               0.375   zinc finger protein 780A isoform a 
ZNF30                 0.375   zinc finger protein 30 isoform a 
ZNF30                 0.375   zinc finger protein 30 isoform a 
LOC100291520          0.374   PREDICTED: hypothetical protein XP_002347975 isofor...
ZFP30                 0.374   zinc finger protein 30 homolog 
ZNF780B               0.374   zinc finger protein 780B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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