Guide to the Human Genome
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Name: TXNRD1 Sequence: fasta or formatted (499aa) NCBI GI: 33519428
Description:

thioredoxin reductase 1 isoform 2

Referenced in:

Glutathione Pathways
Selenium Proteins

Other entries for this name:
alt prot [551aa] thioredoxin reductase 1 isoform 1
alt prot [649aa] thioredoxin reductase 1 isoform 3
alt mRNA [499aa] thioredoxin reductase 1 isoform 2
alt mRNA [499aa] thioredoxin reductase 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         38           3
 C cysteine            2.6         13           1
 D aspartate           4.2         21           2
 E glutamate           7.8         39           2
 F phenylalanine       2.8         14           1
 G glycine            10.4         52           3
 H histidine           1.8          9           1
 I isoleucine          7.2         36           3
 K lysine              6.8         34           2
 L leucine             7.8         39           2
 M methionine          1.6          8           1
 N asparagine          4.0         20           2
 P proline             4.2         21           1
 Q glutamine           3.2         16           1
 R arginine            4.2         21           1
 S serine              4.0         20           2
 T threonine           6.0         30           2
 U selenocysteine      0.2          1           1
 V valine              8.0         40           2
 W tryptophan          1.2          6           1
 Y tyrosine            4.2         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin reductase 1 isoform 2 
TXNRD1                1.000   thioredoxin reductase 1 isoform 2 
TXNRD1                1.000   thioredoxin reductase 1 isoform 3 
TXNRD1                1.000   thioredoxin reductase 1 isoform 1 
TXNRD1                1.000   thioredoxin reductase 1 isoform 2 
TXNRD2                0.539   thioredoxin reductase 2 precursor 
GSR                   0.240   glutathione reductase 
DLD                   0.168   dihydrolipoamide dehydrogenase precursor 
AIFM3                 0.014   apoptosis-inducing factor, mitochondrion-associated...
AIFM3                 0.014   apoptosis-inducing factor, mitochondrion-associated,...
AIFM3                 0.014   apoptosis-inducing factor, mitochondrion-associated,...
MAOA                  0.012   monoamine oxidase A 
RETSAT                0.012   all-trans-13,14-dihydroretinol saturase 
AOF1                  0.011   amine oxidase (flavin containing) domain 1 
PNPLA3                0.009   patatin-like phospholipase domain containing 3 [Homo...
MTO1                  0.009   mitochondrial translation optimization 1 homolog is...
MTO1                  0.009   mitochondrial translation optimization 1 homolog iso...
MTO1                  0.009   mitochondrial translation optimization 1 homolog iso...
SDHA                  0.008   succinate dehydrogenase complex, subunit A, flavopr...
MAOB                  0.006   monoamine oxidase B 
FZD4                  0.006   frizzled 4 
DMGDH                 0.006   dimethylglycine dehydrogenase precursor 
KDM1                  0.006   amine oxidase (flavin containing) domain 2 isoform b...
CLNS1A                0.006   chloride channel, nucleotide-sensitive, 1A 
KDM1                  0.005   amine oxidase (flavin containing) domain 2 isoform a...
FZD8                  0.005   frizzled 8 
PYROXD1               0.005   pyridine nucleotide-disulphide oxidoreductase domain...
GPD2                  0.005   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
GPD2                  0.005   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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