Guide to the Human Genome
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Name: SMOX Sequence: fasta or formatted (190aa) NCBI GI: 28559078
Description:

spermine oxidase isoform 3

Referenced in:

Urea Cycle, Nitric Oxide, and Polyamines

Other entries for this name:
alt prot [555aa] spermine oxidase isoform 1
alt prot [502aa] spermine oxidase isoform 2
alt prot [532aa] spermine oxidase isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         17           3
 C cysteine            1.1          2           1
 D aspartate           4.2          8           2
 E glutamate           7.4         14           2
 F phenylalanine       2.6          5           1
 G glycine            11.6         22           2
 H histidine           4.2          8           1
 I isoleucine          3.7          7           1
 K lysine              2.6          5           1
 L leucine            10.5         20           2
 M methionine          1.6          3           1
 N asparagine          2.6          5           1
 P proline             2.6          5           1
 Q glutamine           4.2          8           2
 R arginine            7.4         14           3
 S serine              8.4         16           2
 T threonine           5.8         11           2
 V valine              6.3         12           3
 W tryptophan          0.5          1           1
 Y tyrosine            3.7          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spermine oxidase isoform 3 
SMOX                  0.748   spermine oxidase isoform 4 
SMOX                  0.748   spermine oxidase isoform 2 
SMOX                  0.748   spermine oxidase isoform 1 
PAOX                  0.134   polyamine oxidase isoform 4 
PAOX                  0.134   polyamine oxidase isoform 2 
PAOX                  0.134   polyamine oxidase isoform 1 
KDM1                  0.090   amine oxidase (flavin containing) domain 2 isoform a...
KDM1                  0.090   amine oxidase (flavin containing) domain 2 isoform b...
IL4I1                 0.073   interleukin 4 induced 1 isoform 1 precursor 
IL4I1                 0.073   interleukin 4 induced 1 isoform 2 
MAOA                  0.064   monoamine oxidase A 
AOF1                  0.062   amine oxidase (flavin containing) domain 1 
MAOB                  0.059   monoamine oxidase B 
FMO1                  0.031   flavin containing monooxygenase 1 
FMO3                  0.028   flavin containing monooxygenase 3 isoform 2 
FMO3                  0.028   flavin containing monooxygenase 3 isoform 1 
PCYOX1                0.028   prenylcysteine oxidase 1 
DPYD                  0.025   dihydropyrimidine dehydrogenase isoform 1 
PPOX                  0.022   protoporphyrinogen oxidase 
PPOX                  0.022   protoporphyrinogen oxidase 
AIFM3                 0.022   apoptosis-inducing factor, mitochondrion-associated...
AIFM3                 0.022   apoptosis-inducing factor, mitochondrion-associated,...
AIFM3                 0.022   apoptosis-inducing factor, mitochondrion-associated,...
RETSAT                0.022   all-trans-13,14-dihydroretinol saturase 
DMGDH                 0.020   dimethylglycine dehydrogenase precursor 
PCYOX1L               0.020   prenylcysteine oxidase 1 like 
PDPR                  0.020   pyruvate dehydrogenase phosphatase regulatory subun...
FMO5                  0.017   flavin containing monooxygenase 5 isoform 3 
FMO5                  0.017   flavin containing monooxygenase 5 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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