Guide to the Human Genome
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Name: ZNF181 Sequence: fasta or formatted (570aa) NCBI GI: 224586807
Description:

zinc finger protein 181 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [571aa] zinc finger protein 181 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5         14           2
 C cysteine            4.7         27           2
 D aspartate           2.3         13           1
 E glutamate           8.6         49           2
 F phenylalanine       3.5         20           1
 G glycine             5.3         30           2
 H histidine           6.3         36           2
 I isoleucine          5.1         29           2
 K lysine             10.9         62           2
 L leucine             6.8         39           2
 M methionine          1.6          9           2
 N asparagine          4.9         28           1
 P proline             3.5         20           1
 Q glutamine           3.9         22           1
 R arginine            4.6         26           2
 S serine             10.9         62           2
 T threonine           5.4         31           1
 V valine              4.4         25           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.9         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 181 isoform 2 
ZNF181                0.997   zinc finger protein 181 isoform 1 
ZNF302                0.604   zinc finger protein 302 
ZNF302                0.604   zinc finger protein 302 
ZNF583                0.455   zinc finger protein 583 
ZNF583                0.455   zinc finger protein 583 
ZNF583                0.455   zinc finger protein 583 
ZNF570                0.417   zinc finger protein 570 
ZNF527                0.415   zinc finger protein 527 
ZNF470                0.413   zinc finger protein 470 
ZNF184                0.408   zinc finger protein 184 
LOC100129800          0.407   PREDICTED: similar to zinc finger protein 181 [Homo...
LOC100129800          0.407   PREDICTED: similar to zinc finger protein 181 [Homo...
DKFZp686E2433         0.404   hypothetical protein LOC345462 
ZNF471                0.403   zinc finger protein 471 
ZNF135                0.398   zinc finger protein 135 
ZFP14                 0.397   zinc finger protein 14-like 
ZNF420                0.395   zinc finger protein 420 
ZNF568                0.395   zinc finger protein 568 
ZNF790                0.394   zinc finger protein 790 
ZNF569                0.394   zinc finger protein 569 
ZNF287                0.393   zinc finger protein 287 
ZNF624                0.391   zinc finger protein 624 
ZNF85                 0.387   zinc finger protein 85 
LOC100291520          0.379   PREDICTED: hypothetical protein XP_002347975 isofor...
ZNF780B               0.379   zinc finger protein 780B 
ZNF461                0.379   gonadotropin inducible transcription repressor 1 [Ho...
ZFP82                 0.377   zinc finger protein 82 homolog 
ZNF708                0.377   zinc finger protein 708 
ZNF528                0.376   zinc finger protein 528 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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