Guide to the Human Genome
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Name: TXNRD1 Sequence: fasta or formatted (649aa) NCBI GI: 148277071
Description:

thioredoxin reductase 1 isoform 3

Referenced in:

Selenium Proteins

Other entries for this name:
alt prot [551aa] thioredoxin reductase 1 isoform 1
alt prot [499aa] thioredoxin reductase 1 isoform 2
alt prot [499aa] thioredoxin reductase 1 isoform 2
alt prot [499aa] thioredoxin reductase 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         54           4
 C cysteine            2.6         17           1
 D aspartate           4.3         28           2
 E glutamate           7.6         49           2
 F phenylalanine       2.9         19           1
 G glycine            10.2         66           3
 H histidine           2.0         13           2
 I isoleucine          6.0         39           3
 K lysine              7.2         47           2
 L leucine             8.5         55           2
 M methionine          1.4          9           1
 N asparagine          3.4         22           2
 P proline             4.3         28           1
 Q glutamine           3.4         22           1
 R arginine            4.6         30           3
 S serine              4.3         28           2
 T threonine           6.6         43           2
 U selenocysteine      0.2          1           1
 V valine              7.6         49           2
 W tryptophan          0.9          6           1
 Y tyrosine            3.7         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin reductase 1 isoform 3 
TXNRD1                0.842   thioredoxin reductase 1 isoform 1 
TXNRD1                0.768   thioredoxin reductase 1 isoform 2 
TXNRD1                0.768   thioredoxin reductase 1 isoform 2 
TXNRD1                0.768   thioredoxin reductase 1 isoform 2 
TXNRD2                0.414   thioredoxin reductase 2 precursor 
GSR                   0.184   glutathione reductase 
DLD                   0.129   dihydrolipoamide dehydrogenase precursor 
GLRX2                 0.033   glutaredoxin 2 isoform 1 
GLRX2                 0.031   glutaredoxin 2 isoform 2 
AIFM3                 0.011   apoptosis-inducing factor, mitochondrion-associated...
AIFM3                 0.011   apoptosis-inducing factor, mitochondrion-associated,...
AIFM3                 0.011   apoptosis-inducing factor, mitochondrion-associated,...
GLRX                  0.010   glutaredoxin (thioltransferase) 
GLRX                  0.010   glutaredoxin (thioltransferase) 
MAOA                  0.009   monoamine oxidase A 
RETSAT                0.009   all-trans-13,14-dihydroretinol saturase 
GRXCR1                0.009   glutaredoxin, cysteine rich 1 
AOF1                  0.009   amine oxidase (flavin containing) domain 1 
MTO1                  0.008   mitochondrial translation optimization 1 homolog is...
MTO1                  0.008   mitochondrial translation optimization 1 homolog iso...
MTO1                  0.008   mitochondrial translation optimization 1 homolog iso...
PNPLA3                0.007   patatin-like phospholipase domain containing 3 [Homo...
RSPO1                 0.007   R-spondin1 
SDHA                  0.006   succinate dehydrogenase complex, subunit A, flavopr...
DMGDH                 0.005   dimethylglycine dehydrogenase precursor 
MAOB                  0.005   monoamine oxidase B 
FZD4                  0.005   frizzled 4 
KDM1                  0.005   amine oxidase (flavin containing) domain 2 isoform b...
CLNS1A                0.005   chloride channel, nucleotide-sensitive, 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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