Guide to the Human Genome
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Name: SARDH Sequence: fasta or formatted (918aa) NCBI GI: 197927446
Description:

sarcosine dehydrogenase precursor

Referenced in:

Acetylcholine
TCA Cycle

Other entries for this name:
alt mRNA [918aa] sarcosine dehydrogenase precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         88           3
 C cysteine            1.9         17           1
 D aspartate           5.0         46           2
 E glutamate           5.8         53           3
 F phenylalanine       3.6         33           2
 G glycine             9.9         91           3
 H histidine           4.4         40           2
 I isoleucine          3.4         31           2
 K lysine              3.3         30           2
 L leucine             9.2         84           2
 M methionine          2.5         23           2
 N asparagine          2.3         21           2
 P proline             5.7         52           2
 Q glutamine           3.2         29           2
 R arginine            7.0         64           3
 S serine              6.3         58           2
 T threonine           4.7         43           2
 V valine              7.2         66           3
 W tryptophan          1.7         16           1
 Y tyrosine            3.6         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sarcosine dehydrogenase precursor 
SARDH                 1.000   sarcosine dehydrogenase precursor 
DMGDH                 0.217   dimethylglycine dehydrogenase precursor 
PDPR                  0.216   pyruvate dehydrogenase phosphatase regulatory subun...
AMT                   0.024   aminomethyltransferase 
FOXRED1               0.019   FAD-dependent oxidoreductase domain containing 1 [Hom...
L2HGDH                0.012   L-2-hydroxyglutarate dehydrogenase precursor 
PIPOX                 0.007   pipecolic acid oxidase 
LOC100291910          0.004   PREDICTED: hypothetical protein XP_002345652 
INADL                 0.004   InaD-like 
MYST3                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
CMAS                  0.003   cytidine monophospho-N-acetylneuraminic acid syntheta...
YLPM1                 0.003   YLP motif containing 1 
MSLN                  0.003   mesothelin isoform 2 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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